RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 AMELXQ99217 191 aa11.16□□□□□ -0.62
SPIRE1-201ENST00000309836 MXRA5Q9NR99 2828 aa11.16□□□□□ -0.62
SPIRE1-201ENST00000309836 A0A0J9YY99 117 aa11.15□□□□□ -0.62
SPIRE1-201ENST00000309836 H3BMM0 161 aa11.15□□□□□ -0.62
SPIRE1-201ENST00000309836 I3L3M4 83 aa11.15□□□□□ -0.62
SPIRE1-201ENST00000309836 Q5PR19 223 aa11.15□□□□□ -0.62
SPIRE1-201ENST00000309836 TMEM170BQ5T4T1 132 aa11.15□□□□□ -0.62
SPIRE1-201ENST00000309836 NFE4Q86UQ8 179 aa11.15□□□□□ -0.62
SPIRE1-201ENST00000309836 C20orf203Q8NBC4 194 aa11.15□□□□□ -0.62
SPIRE1-201ENST00000309836 DUX3Q96PT4 197 aa11.15□□□□□ -0.62
SPIRE1-201ENST00000309836 USP24Q9UPU5 2620 aa11.15□□□□□ -0.62
SPIRE1-201ENST00000309836 UBR5O95071 2799 aaPredicted RBP11.15□□□□□ -0.62
SPIRE1-201ENST00000309836 ZNF462Q96JM2 2506 aa11.15□□□□□ -0.63
SPIRE1-201ENST00000309836 PRM2P04554 102 aa11.15□□□□□ -0.63
SPIRE1-201ENST00000309836 UBE2D1P51668 147 aa11.15□□□□□ -0.63
SPIRE1-201ENST00000309836 DEFB113Q30KQ7 82 aa11.15□□□□□ -0.63
SPIRE1-201ENST00000309836 PRRC2AP48634 2157 aaKnown RBP11.14□□□□□ -0.63
SPIRE1-201ENST00000309836 PROK1P58294 105 aa11.14□□□□□ -0.63
SPIRE1-201ENST00000309836 EDA2RQ9HAV5 297 aa11.14□□□□□ -0.63
SPIRE1-201ENST00000309836 IGHV3-73A0A0B4J1V6 119 aa11.13□□□□□ -0.63
SPIRE1-201ENST00000309836 SRSF9Q13242 221 aaKnown RBP eCLIP11.13□□□□□ -0.63
SPIRE1-201ENST00000309836 WFDC2Q14508 124 aa11.13□□□□□ -0.63
SPIRE1-201ENST00000309836 TMEM61Q8N0U2 210 aa11.13□□□□□ -0.63
SPIRE1-201ENST00000309836 SORL1Q92673 2214 aa11.13□□□□□ -0.63
SPIRE1-201ENST00000309836 IGLV4-3A0A075B6K6 122 aa11.12□□□□□ -0.63
SPIRE1-201ENST00000309836 TRAV2A0A0B4J234 112 aa11.12□□□□□ -0.63
SPIRE1-201ENST00000309836 TEX48A0A1B0GUV7 120 aa11.12□□□□□ -0.63
SPIRE1-201ENST00000309836 H3BMG7 143 aa11.12□□□□□ -0.63
SPIRE1-201ENST00000309836 HTN1P15515 57 aa11.12□□□□□ -0.63
SPIRE1-201ENST00000309836 HIST2H2BDQ6DRA6 164 aa11.12□□□□□ -0.63
SPIRE1-201ENST00000309836 ZNF843Q8N446 348 aa11.12□□□□□ -0.63
SPIRE1-201ENST00000309836 C4orf3Q8WVX3 66 aa11.12□□□□□ -0.63
SPIRE1-201ENST00000309836 PGPEP1Q9NXJ5 209 aa11.12□□□□□ -0.63
SPIRE1-201ENST00000309836 ZFYVE26Q68DK2 2539 aa11.12□□□□□ -0.63
SPIRE1-201ENST00000309836 RPL24P83731 157 aaKnown RBP11.12□□□□□ -0.63
SPIRE1-201ENST00000309836 Q96MF0 132 aa11.12□□□□□ -0.63
SPIRE1-201ENST00000309836 SPAG8Q99932 426 aaPredicted RBP11.12□□□□□ -0.63
SPIRE1-201ENST00000309836 PRO0461Q9UI25 63 aa11.12□□□□□ -0.63
SPIRE1-201ENST00000309836 FAM208BQ5VWN6 2430 aa11.12□□□□□ -0.63
SPIRE1-201ENST00000309836 TMEM238LA0A1B0GVL6 79 aa11.11□□□□□ -0.63
SPIRE1-201ENST00000309836 TMEM223A0PJW6 202 aa11.11□□□□□ -0.63
SPIRE1-201ENST00000309836 A6NJY4 79 aa11.11□□□□□ -0.63
SPIRE1-201ENST00000309836 J3QQQ9 107 aa11.11□□□□□ -0.63
SPIRE1-201ENST00000309836 KRTAP1-3Q8IUG1 177 aa11.11□□□□□ -0.63
SPIRE1-201ENST00000309836 DLX4Q92988 240 aaPredicted RBP11.11□□□□□ -0.63
SPIRE1-201ENST00000309836 FAM104AQ969W3 186 aa11.11□□□□□ -0.63
SPIRE1-201ENST00000309836 MAP6D1Q9H9H5 199 aa11.11□□□□□ -0.63
SPIRE1-201ENST00000309836 SPANXB1Q9NS25 103 aaPredicted RBP11.11□□□□□ -0.63
SPIRE1-201ENST00000309836 CENPEQ02224 2701 aa11.11□□□□□ -0.63
SPIRE1-201ENST00000309836 F8W1H4 67 aa11.1□□□□□ -0.63
SPIRE1-201ENST00000309836 IGHV3-30P01768 117 aa11.1□□□□□ -0.63
SPIRE1-201ENST00000309836 IGHV3-30-5P0DP03 117 aa11.1□□□□□ -0.63
SPIRE1-201ENST00000309836 ZNF22P17026 224 aaPredicted RBP11.1□□□□□ -0.63
SPIRE1-201ENST00000309836 LRRC75A-AS1Q8N1F1 130 aa11.1□□□□□ -0.63
SPIRE1-201ENST00000309836 LRRK2Q5S007 2527 aa11.1□□□□□ -0.63
SPIRE1-201ENST00000309836 A0A0J9YXV3 536 aa11.1□□□□□ -0.63
SPIRE1-201ENST00000309836 M0R2P5 195 aa11.1□□□□□ -0.63
SPIRE1-201ENST00000309836 LEPROTO15243 131 aa11.1□□□□□ -0.63
SPIRE1-201ENST00000309836 TSPAN13O95857 204 aa11.1□□□□□ -0.63
SPIRE1-201ENST00000309836 Q6ZSN1 163 aa11.1□□□□□ -0.63
SPIRE1-201ENST00000309836 SLC25A29Q8N8R3 303 aa11.1□□□□□ -0.63
SPIRE1-201ENST00000309836 MRPL16Q9NX20 251 aaKnown RBP11.1□□□□□ -0.63
SPIRE1-201ENST00000309836 PEMTQ9UBM1 199 aa11.1□□□□□ -0.63
SPIRE1-201ENST00000309836 LGALS3P17931 250 aaKnown RBP11.09□□□□□ -0.63
SPIRE1-201ENST00000309836 KHDC1LQ5JSQ8 128 aa11.09□□□□□ -0.63
SPIRE1-201ENST00000309836 Q9UF83 564 aa11.09□□□□□ -0.63
SPIRE1-201ENST00000309836 RHODO00212 210 aa11.08□□□□□ -0.64
SPIRE1-201ENST00000309836 ZNF415Q09FC8 603 aa11.08□□□□□ -0.64
SPIRE1-201ENST00000309836 MTURNQ8N3F0 131 aa11.08□□□□□ -0.64
SPIRE1-201ENST00000309836 PTPN13Q12923 2485 aa11.08□□□□□ -0.64
SPIRE1-201ENST00000309836 CD28P10747 220 aa11.08□□□□□ -0.64
SPIRE1-201ENST00000309836 DEFB114Q30KQ6 69 aa11.08□□□□□ -0.64
SPIRE1-201ENST00000309836 GAGE13Q4V321 117 aa11.08□□□□□ -0.64
SPIRE1-201ENST00000309836 DYNLRB2Q8TF09 96 aa11.08□□□□□ -0.64
SPIRE1-201ENST00000309836 PTH2Q96A98 100 aa11.08□□□□□ -0.64
SPIRE1-201ENST00000309836 VCX2Q9H322 139 aa11.08□□□□□ -0.64
SPIRE1-201ENST00000309836 NACAE9PAV3 2078 aa11.08□□□□□ -0.64
SPIRE1-201ENST00000309836 A8MWV9 139 aa11.07□□□□□ -0.64
SPIRE1-201ENST00000309836 APOMO95445 188 aa11.07□□□□□ -0.64
SPIRE1-201ENST00000309836 NDUFA11Q86Y39 141 aa11.07□□□□□ -0.64
SPIRE1-201ENST00000309836 C11orf72Q8NBR9 251 aa11.07□□□□□ -0.64
SPIRE1-201ENST00000309836 PYGO1Q9Y3Y4 419 aa11.07□□□□□ -0.64
SPIRE1-201ENST00000309836 PIK3CD-AS1Q5SR53 167 aa11.06□□□□□ -0.64
SPIRE1-201ENST00000309836 CFAP126Q5VTH2 177 aa11.06□□□□□ -0.64
SPIRE1-201ENST00000309836 SH2D6Q7Z4S9 175 aa11.06□□□□□ -0.64
SPIRE1-201ENST00000309836 LINC00467Q9BRT7 94 aa11.06□□□□□ -0.64
SPIRE1-201ENST00000309836 TEX15Q9BXT5 2789 aa11.06□□□□□ -0.64
SPIRE1-201ENST00000309836 IGHV3-64A0A075B6Q5 118 aa11.06□□□□□ -0.64
SPIRE1-201ENST00000309836 CFC1BP0CG36 223 aa11.06□□□□□ -0.64
SPIRE1-201ENST00000309836 CFC1P0CG37 223 aa11.06□□□□□ -0.64
SPIRE1-201ENST00000309836 TNFRSF18Q9Y5U5 241 aa11.06□□□□□ -0.64
SPIRE1-201ENST00000309836 NAV2Q8IVL1 2488 aa11.05□□□□□ -0.64
SPIRE1-201ENST00000309836 ABCA12Q86UK0 2595 aa11.05□□□□□ -0.64
SPIRE1-201ENST00000309836 UBE2D3P61077 147 aa11.05□□□□□ -0.64
SPIRE1-201ENST00000309836 UBE2D2P62837 147 aa11.05□□□□□ -0.64
SPIRE1-201ENST00000309836 CEMP1Q6PRD7 247 aaPredicted RBP11.05□□□□□ -0.64
SPIRE1-201ENST00000309836 Q6ZSV7 163 aa11.05□□□□□ -0.64
SPIRE1-201ENST00000309836 LINC01587Q99440 93 aa11.05□□□□□ -0.64
SPIRE1-201ENST00000309836 CHCHD7Q9BUK0 85 aa11.05□□□□□ -0.64
SPIRE1-201ENST00000309836 COTL1Q14019 142 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms