RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 H7C1H1 209 aa8.89□□□□□ -0.99
APTX-201ENST00000309615 RAB4AP20338 218 aa8.89□□□□□ -0.99
APTX-201ENST00000309615 RPL36AP83881 106 aaKnown RBP8.89□□□□□ -0.99
APTX-201ENST00000309615 ATRAIDQ6UW56 229 aa8.89□□□□□ -0.99
APTX-201ENST00000309615 LYPD5Q6UWN5 251 aa8.89□□□□□ -0.99
APTX-201ENST00000309615 SH2D6Q7Z4S9 175 aa8.89□□□□□ -0.99
APTX-201ENST00000309615 UBE2DNLQ8IWF7 75 aa8.89□□□□□ -0.99
APTX-201ENST00000309615 RPL36ALQ969Q0 106 aaKnown RBP8.89□□□□□ -0.99
APTX-201ENST00000309615 GAS8-AS1O95177 125 aa8.88□□□□□ -0.99
APTX-201ENST00000309615 S100A8P05109 93 aa8.88□□□□□ -0.99
APTX-201ENST00000309615 RASL11AQ6T310 242 aa8.88□□□□□ -0.99
APTX-201ENST00000309615 ATP6V0E2Q8NHE4 81 aa8.88□□□□□ -0.99
APTX-201ENST00000309615 S100PP25815 95 aa8.87□□□□□ -0.99
APTX-201ENST00000309615 UBE2D3P61077 147 aa8.87□□□□□ -0.99
APTX-201ENST00000309615 UBE2D2P62837 147 aa8.87□□□□□ -0.99
APTX-201ENST00000309615 FAM104BQ5XKR9 115 aa8.87□□□□□ -0.99
APTX-201ENST00000309615 RPL39LQ96EH5 51 aaKnown RBP8.87□□□□□ -0.99
APTX-201ENST00000309615 NIT2Q9NQR4 276 aa8.87□□□□□ -0.99
APTX-201ENST00000309615 TRAV9-1A0A075B6T8 112 aa8.86□□□□□ -0.99
APTX-201ENST00000309615 MRPL51Q4U2R6 128 aaKnown RBP8.86□□□□□ -0.99
APTX-201ENST00000309615 GTSF1LQ9H1H1 148 aa8.86□□□□□ -0.99
APTX-201ENST00000309615 TNFRSF18Q9Y5U5 241 aa8.86□□□□□ -0.99
APTX-201ENST00000309615 IGHV3-38A0A0C4DH36 116 aa8.85□□□□□ -0.99
APTX-201ENST00000309615 SMKR1H3BMG3 65 aa8.85□□□□□ -0.99
APTX-201ENST00000309615 NCR2O95944 276 aa8.85□□□□□ -0.99
APTX-201ENST00000309615 RPS10P46783 165 aaKnown RBP8.85□□□□□ -0.99
APTX-201ENST00000309615 MRAP2Q96G30 205 aa8.85□□□□□ -0.99
APTX-201ENST00000309615 DNAJC30Q96LL9 226 aa8.85□□□□□ -0.99
APTX-201ENST00000309615 MRPS16Q9Y3D3 137 aaKnown RBP8.85□□□□□ -0.99
APTX-201ENST00000309615 FRZBQ92765 325 aa8.85□□□□□ -0.99
APTX-201ENST00000309615 KMT2CQ8NEZ4 4911 aaKnown RBP8.85□□□□□ -0.99
APTX-201ENST00000309615 ALMS1Q8TCU4 4167 aa8.84□□□□□ -0.99
APTX-201ENST00000309615 TIRAPP58753 221 aa8.84□□□□□ -0.99
APTX-201ENST00000309615 UPK3BQ9BT76 320 aa8.84□□□□□ -0.99
APTX-201ENST00000309615 ELOBQ15370 118 aa8.83□□□□□ -1
APTX-201ENST00000309615 OR10J3Q5JRS4 329 aa8.83□□□□□ -1
APTX-201ENST00000309615 VPS13DQ5THJ4 4388 aa8.83□□□□□ -1
APTX-201ENST00000309615 DNAH1Q9P2D7 4330 aa8.83□□□□□ -1
APTX-201ENST00000309615 TGIF2-C20orf24A0A0A6YYL0 155 aa8.83□□□□□ -1
APTX-201ENST00000309615 TMEM136Q6ZRR5 245 aa8.83□□□□□ -1
APTX-201ENST00000309615 DAZ4Q86SG3 579 aaKnown RBP8.83□□□□□ -1
APTX-201ENST00000309615 DEFB104AQ8WTQ1 72 aa8.83□□□□□ -1
APTX-201ENST00000309615 Q9H8V8 135 aa8.83□□□□□ -1
APTX-201ENST00000309615 DAZ3Q9NR90 486 aaKnown RBP8.83□□□□□ -1
APTX-201ENST00000309615 SACSQ9NZJ4 4579 aa8.82□□□□□ -1
APTX-201ENST00000309615 D6R8Y8 96 aa8.82□□□□□ -1
APTX-201ENST00000309615 CKS2P33552 79 aa8.82□□□□□ -1
APTX-201ENST00000309615 LELP1Q5T871 98 aa8.82□□□□□ -1
APTX-201ENST00000309615 WFDC10BQ8IUB3 73 aa8.82□□□□□ -1
APTX-201ENST00000309615 CBLN2Q8IUK8 224 aa8.82□□□□□ -1
APTX-201ENST00000309615 NRACQ8N912 160 aa8.82□□□□□ -1
APTX-201ENST00000309615 IGLV2-18A0A075B6J9 118 aa8.81□□□□□ -1
APTX-201ENST00000309615 TRBV6-5A0A0K0K1A5 114 aa8.81□□□□□ -1
APTX-201ENST00000309615 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.81□□□□□ -1
APTX-201ENST00000309615 SDHAF1A6NFY7 115 aa8.81□□□□□ -1
APTX-201ENST00000309615 SIVA1O15304 175 aa8.81□□□□□ -1
APTX-201ENST00000309615 NTM-AS1Q6ZSK4 140 aa8.81□□□□□ -1
APTX-201ENST00000309615 YPEL4Q96NS1 127 aa8.81□□□□□ -1
APTX-201ENST00000309615 ST20Q9HBF5 79 aa8.81□□□□□ -1
APTX-201ENST00000309615 TRBV24-1A0A075B6N3 115 aa8.8□□□□□ -1
APTX-201ENST00000309615 TRBV6-8A0A0A6YYG3 113 aa8.8□□□□□ -1
APTX-201ENST00000309615 TRAV8-6A0A0B4J262 113 aa8.8□□□□□ -1
APTX-201ENST00000309615 GNB1LQ9BYB4 327 aa8.8□□□□□ -1
APTX-201ENST00000309615 PPP1R17O96001 155 aa8.79□□□□□ -1
APTX-201ENST00000309615 PPBPP02775 128 aa8.79□□□□□ -1
APTX-201ENST00000309615 ORMDL3Q8N138 153 aa8.79□□□□□ -1
APTX-201ENST00000309615 TMEM70Q9BUB7 260 aa8.79□□□□□ -1
APTX-201ENST00000309615 SMCO4Q9NRQ5 59 aa8.79□□□□□ -1
APTX-201ENST00000309615 KMT2AQ03164 3969 aa8.79□□□□□ -1
APTX-201ENST00000309615 M0R2N4 97 aa8.79□□□□□ -1
APTX-201ENST00000309615 TNFRSF6BO95407 300 aa8.79□□□□□ -1
APTX-201ENST00000309615 NPYP01303 97 aa8.79□□□□□ -1
APTX-201ENST00000309615 HLA-DQA1P01909 254 aa8.79□□□□□ -1
APTX-201ENST00000309615 POLR2KP53803 58 aaKnown RBP8.79□□□□□ -1
APTX-201ENST00000309615 SUMO2P61956 95 aaKnown RBP8.79□□□□□ -1
APTX-201ENST00000309615 APCSP02743 223 aa8.78□□□□□ -1
APTX-201ENST00000309615 KIAA1644Q3SXP7 199 aa8.78□□□□□ -1
APTX-201ENST00000309615 PRELID3AQ96N28 172 aa8.78□□□□□ -1
APTX-201ENST00000309615 I3L3M4 83 aa8.77□□□□□ -1.01
APTX-201ENST00000309615 COTL1Q14019 142 aa8.77□□□□□ -1.01
APTX-201ENST00000309615 COX19Q49B96 90 aa8.77□□□□□ -1.01
APTX-201ENST00000309615 TMEM97Q5BJF2 176 aa8.77□□□□□ -1.01
APTX-201ENST00000309615 Q8N3U1 123 aa8.77□□□□□ -1.01
APTX-201ENST00000309615 TRBV27A0A0K0K1C4 114 aa8.77□□□□□ -1.01
APTX-201ENST00000309615 NBDYA0A0U1RRE5 68 aa8.77□□□□□ -1.01
APTX-201ENST00000309615 SCO1O75880 301 aa8.77□□□□□ -1.01
APTX-201ENST00000309615 DNAH10OSP0CZ25 163 aa8.77□□□□□ -1.01
APTX-201ENST00000309615 PMCHP20382 165 aa8.77□□□□□ -1.01
APTX-201ENST00000309615 C20orf78Q9BR46 151 aa8.77□□□□□ -1.01
APTX-201ENST00000309615 KRTAP1-5Q9BYS1 174 aa8.77□□□□□ -1.01
APTX-201ENST00000309615 TRBV25-1A0A075B6N4 114 aa8.76□□□□□ -1.01
APTX-201ENST00000309615 PHOX2AO14813 284 aa8.76□□□□□ -1.01
APTX-201ENST00000309615 ATP6V1G1O75348 118 aa8.76□□□□□ -1.01
APTX-201ENST00000309615 MT-ND6P03923 174 aa8.76□□□□□ -1.01
APTX-201ENST00000309615 IQCJQ1A5X6 159 aa8.76□□□□□ -1.01
APTX-201ENST00000309615 Q6ZR54 194 aa8.76□□□□□ -1.01
APTX-201ENST00000309615 CHCHD5Q9BSY4 110 aa8.76□□□□□ -1.01
APTX-201ENST00000309615 MRPL18Q9H0U6 180 aaKnown RBP8.76□□□□□ -1.01
APTX-201ENST00000309615 HYDINQ4G0P3 5121 aa8.75□□□□□ -1.01
APTX-201ENST00000309615 IGHV1-24A0A0C4DH33 117 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms