RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 MAPKAPK5-AS1Q8N8E1 139 aa12.02□□□□□ -0.48
TVP23B-201ENST00000307767 TP53TG1Q9Y2A0 90 aa12.02□□□□□ -0.48
TVP23B-201ENST00000307767 CHTOPQ9Y3Y2 248 aaKnown RBP12.02□□□□□ -0.48
TVP23B-201ENST00000307767 P0DMU3 169 aa12.02□□□□□ -0.49
TVP23B-201ENST00000307767 FAM231AP0DMU4 169 aa12.02□□□□□ -0.49
TVP23B-201ENST00000307767 FAM231CP0DMU5 169 aa12.02□□□□□ -0.49
TVP23B-201ENST00000307767 PLNP26678 52 aa12.01□□□□□ -0.49
TVP23B-201ENST00000307767 JMJD8Q96S16 334 aa12.01□□□□□ -0.49
TVP23B-201ENST00000307767 EDA2RQ9HAV5 297 aa12.01□□□□□ -0.49
TVP23B-201ENST00000307767 CYSLTR1Q9Y271 337 aa12.01□□□□□ -0.49
TVP23B-201ENST00000307767 Q9UF83 564 aa12.01□□□□□ -0.49
TVP23B-201ENST00000307767 SETD2Q9BYW2 2564 aaPredicted RBP12.01□□□□□ -0.49
TVP23B-201ENST00000307767 WNK1Q9H4A3 2382 aa12□□□□□ -0.49
TVP23B-201ENST00000307767 Q6ZSN1 163 aa12□□□□□ -0.49
TVP23B-201ENST00000307767 TRPT1Q86TN4 253 aaKnown RBP12□□□□□ -0.49
TVP23B-201ENST00000307767 PTH2Q96A98 100 aa12□□□□□ -0.49
TVP23B-201ENST00000307767 C1orf158Q8N1D5 194 aa11.99□□□□□ -0.49
TVP23B-201ENST00000307767 KIR2DL4Q99706 377 aa11.99□□□□□ -0.49
TVP23B-201ENST00000307767 IGLV4-69A0A075B6H9 119 aa11.99□□□□□ -0.49
TVP23B-201ENST00000307767 HSD52Q0P140 79 aa11.99□□□□□ -0.49
TVP23B-201ENST00000307767 HIGD1BQ9P298 99 aa11.99□□□□□ -0.49
TVP23B-201ENST00000307767 GCN1Q92616 2671 aaKnown RBP11.99□□□□□ -0.49
TVP23B-201ENST00000307767 NIPBLQ6KC79 2804 aaeCLIP11.99□□□□□ -0.49
TVP23B-201ENST00000307767 TRBV25-1A0A075B6N4 114 aa11.98□□□□□ -0.49
TVP23B-201ENST00000307767 IGHV3-73A0A0B4J1V6 119 aa11.98□□□□□ -0.49
TVP23B-201ENST00000307767 M0R2P5 195 aa11.98□□□□□ -0.49
TVP23B-201ENST00000307767 AZU1P20160 251 aa11.98□□□□□ -0.49
TVP23B-201ENST00000307767 PIK3CD-AS1Q5SR53 167 aa11.98□□□□□ -0.49
TVP23B-201ENST00000307767 CCL25O15444 150 aa11.98□□□□□ -0.49
TVP23B-201ENST00000307767 KRTAP10-3P60369 221 aa11.98□□□□□ -0.49
TVP23B-201ENST00000307767 LINC01587Q99440 93 aa11.98□□□□□ -0.49
TVP23B-201ENST00000307767 SEC11AP67812 179 aa11.97□□□□□ -0.49
TVP23B-201ENST00000307767 NSUN5P1Q3KNT7 163 aa11.97□□□□□ -0.49
TVP23B-201ENST00000307767 TIMM17AQ99595 171 aa11.97□□□□□ -0.49
TVP23B-201ENST00000307767 XCL2Q9UBD3 114 aa11.97□□□□□ -0.49
TVP23B-201ENST00000307767 NACAE9PAV3 2078 aa11.96□□□□□ -0.49
TVP23B-201ENST00000307767 NDUFA7O95182 113 aa11.96□□□□□ -0.49
TVP23B-201ENST00000307767 INSP01308 110 aa11.96□□□□□ -0.49
TVP23B-201ENST00000307767 ZNF415Q09FC8 603 aa11.96□□□□□ -0.49
TVP23B-201ENST00000307767 BEAN1Q3B7T3 259 aa11.96□□□□□ -0.49
TVP23B-201ENST00000307767 CFAP126Q5VTH2 177 aa11.96□□□□□ -0.49
TVP23B-201ENST00000307767 HECTD1Q9ULT8 2610 aa11.96□□□□□ -0.49
TVP23B-201ENST00000307767 K7EP13 123 aa11.96□□□□□ -0.5
TVP23B-201ENST00000307767 GIG44P09565 113 aaPredicted RBP11.96□□□□□ -0.5
TVP23B-201ENST00000307767 RHOHQ15669 191 aa11.96□□□□□ -0.5
TVP23B-201ENST00000307767 ZNF418Q8TF45 676 aaPredicted RBP11.96□□□□□ -0.5
TVP23B-201ENST00000307767 TMEM141Q96I45 108 aa11.96□□□□□ -0.5
TVP23B-201ENST00000307767 CST9LQ9H4G1 147 aa11.96□□□□□ -0.5
TVP23B-201ENST00000307767 C19orf73Q9NVV2 129 aa11.96□□□□□ -0.5
TVP23B-201ENST00000307767 IL17DQ8TAD2 202 aa11.95□□□□□ -0.5
TVP23B-201ENST00000307767 FAM104AQ969W3 186 aa11.95□□□□□ -0.5
TVP23B-201ENST00000307767 OPRPNQ99935 248 aaPredicted RBP11.95□□□□□ -0.5
TVP23B-201ENST00000307767 TRAV8-6A0A0B4J262 113 aa11.95□□□□□ -0.5
TVP23B-201ENST00000307767 LINC01549A6NIU2 74 aa11.95□□□□□ -0.5
TVP23B-201ENST00000307767 C11orf86A6NJI1 115 aa11.95□□□□□ -0.5
TVP23B-201ENST00000307767 A8MWV9 139 aa11.95□□□□□ -0.5
TVP23B-201ENST00000307767 OR11H12B2RN74 326 aa11.95□□□□□ -0.5
TVP23B-201ENST00000307767 I3L3M4 83 aa11.95□□□□□ -0.5
TVP23B-201ENST00000307767 LY6G6DO95868 133 aa11.95□□□□□ -0.5
TVP23B-201ENST00000307767 IGLV1-51P01701 117 aa11.95□□□□□ -0.5
TVP23B-201ENST00000307767 C20orf203Q8NBC4 194 aa11.95□□□□□ -0.5
TVP23B-201ENST00000307767 CHAC1Q9BUX1 264 aa11.95□□□□□ -0.5
TVP23B-201ENST00000307767 UBE2V1Q13404 147 aa11.94□□□□□ -0.5
TVP23B-201ENST00000307767 PMVKQ15126 192 aa11.94□□□□□ -0.5
TVP23B-201ENST00000307767 MRPL16Q9NX20 251 aaKnown RBP11.94□□□□□ -0.5
TVP23B-201ENST00000307767 STHQ8IWL8 128 aa11.93□□□□□ -0.5
TVP23B-201ENST00000307767 E9PLD3 99 aa11.93□□□□□ -0.5
TVP23B-201ENST00000307767 FXYD2P54710 66 aa11.93□□□□□ -0.5
TVP23B-201ENST00000307767 EMP1P54849 157 aa11.93□□□□□ -0.5
TVP23B-201ENST00000307767 ZNRF2Q8NHG8 242 aa11.93□□□□□ -0.5
TVP23B-201ENST00000307767 WFDC10AQ9H1F0 79 aa11.93□□□□□ -0.5
TVP23B-201ENST00000307767 SETXQ7Z333 2677 aaKnown RBP11.92□□□□□ -0.5
TVP23B-201ENST00000307767 RS1O15537 224 aa11.92□□□□□ -0.5
TVP23B-201ENST00000307767 SPXQ9BT56 116 aa11.92□□□□□ -0.5
TVP23B-201ENST00000307767 OTOGQ6ZRI0 2925 aa11.92□□□□□ -0.5
TVP23B-201ENST00000307767 HIVEP2P31629 2446 aa11.91□□□□□ -0.5
TVP23B-201ENST00000307767 SAP30O75446 220 aa11.91□□□□□ -0.5
TVP23B-201ENST00000307767 SCGB2A2Q13296 93 aa11.91□□□□□ -0.5
TVP23B-201ENST00000307767 H3BRM9 83 aa11.9□□□□□ -0.5
TVP23B-201ENST00000307767 RNASE8Q8TDE3 154 aaKnown RBP11.9□□□□□ -0.5
TVP23B-201ENST00000307767 PRADC1Q9BSG0 188 aa11.9□□□□□ -0.5
TVP23B-201ENST00000307767 TM2D2Q9BX73 214 aa11.9□□□□□ -0.5
TVP23B-201ENST00000307767 IGHV3-53P01767 116 aa11.9□□□□□ -0.51
TVP23B-201ENST00000307767 MYMXA0A1B0GTQ4 84 aa11.89□□□□□ -0.51
TVP23B-201ENST00000307767 AMMECR1LQ6DCA0 310 aa11.89□□□□□ -0.51
TVP23B-201ENST00000307767 OR11H2Q8NH07 326 aa11.89□□□□□ -0.51
TVP23B-201ENST00000307767 IGLV4-3A0A075B6K6 122 aa11.88□□□□□ -0.51
TVP23B-201ENST00000307767 PTTG1IPP53801 180 aa11.88□□□□□ -0.51
TVP23B-201ENST00000307767 IGHV3OR16-12A0A075B7B8 117 aa11.88□□□□□ -0.51
TVP23B-201ENST00000307767 GCSHP23434 173 aa11.88□□□□□ -0.51
TVP23B-201ENST00000307767 VAMP3Q15836 100 aa11.88□□□□□ -0.51
TVP23B-201ENST00000307767 PHLDA1Q8WV24 401 aaPredicted RBP11.88□□□□□ -0.51
TVP23B-201ENST00000307767 FAM110AQ9BQ89 295 aa11.88□□□□□ -0.51
TVP23B-201ENST00000307767 JMJD1CQ15652 2540 aa11.88□□□□□ -0.51
TVP23B-201ENST00000307767 TRBV7-3A0A075B6L6 115 aa11.87□□□□□ -0.51
TVP23B-201ENST00000307767 A6NDN8 102 aa11.87□□□□□ -0.51
TVP23B-201ENST00000307767 NFE4Q86UQ8 179 aa11.87□□□□□ -0.51
TVP23B-201ENST00000307767 CEND1Q8N111 149 aa11.87□□□□□ -0.51
TVP23B-201ENST00000307767 CHCHD7Q9BUK0 85 aa11.87□□□□□ -0.51
TVP23B-201ENST00000307767 NOTCH2Q04721 2471 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms