RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 NHLRC4P0CG21 123 aaPredicted RBP8.31□□□□□ -1.08
LSM3-201ENST00000306024 BLCAPP62952 87 aa8.31□□□□□ -1.08
LSM3-201ENST00000306024 C5orf47Q569G3 176 aa8.31□□□□□ -1.08
LSM3-201ENST00000306024 HRNRQ86YZ3 2850 aaPredicted RBP8.31□□□□□ -1.08
LSM3-201ENST00000306024 TRAV8-3A0A0A6YYJ7 113 aa8.31□□□□□ -1.08
LSM3-201ENST00000306024 IGHV7-81A0A0B4J1V7 117 aa8.31□□□□□ -1.08
LSM3-201ENST00000306024 UBE2D3P61077 147 aa8.31□□□□□ -1.08
LSM3-201ENST00000306024 NPC2P61916 151 aa8.31□□□□□ -1.08
LSM3-201ENST00000306024 UBE2D2P62837 147 aa8.31□□□□□ -1.08
LSM3-201ENST00000306024 RNF182Q8N6D2 247 aa8.31□□□□□ -1.08
LSM3-201ENST00000306024 DUX3Q96PT4 197 aa8.31□□□□□ -1.08
LSM3-201ENST00000306024 ITPR2Q14571 2701 aa8.31□□□□□ -1.08
LSM3-201ENST00000306024 KMT2BQ9UMN6 2715 aaPredicted RBP8.31□□□□□ -1.08
LSM3-201ENST00000306024 SPRY2O43597 315 aa8.31□□□□□ -1.08
LSM3-201ENST00000306024 C15orf32Q32M92 178 aa8.31□□□□□ -1.08
LSM3-201ENST00000306024 EEF1AKMT3Q96AZ1 226 aa8.31□□□□□ -1.08
LSM3-201ENST00000306024 UBE2D1P51668 147 aa8.3□□□□□ -1.08
LSM3-201ENST00000306024 CLEC19AQ6UXS0 136 aa8.3□□□□□ -1.08
LSM3-201ENST00000306024 SLC50A1Q9BRV3 221 aa8.3□□□□□ -1.08
LSM3-201ENST00000306024 TP53TG1Q9Y2A0 90 aa8.3□□□□□ -1.08
LSM3-201ENST00000306024 DCHS2Q6V1P9 2916 aa8.3□□□□□ -1.08
LSM3-201ENST00000306024 J3QQQ9 107 aa8.3□□□□□ -1.08
LSM3-201ENST00000306024 CRIP2P52943 208 aaPredicted RBP8.3□□□□□ -1.08
LSM3-201ENST00000306024 GAGE2AQ6NT46 116 aa8.3□□□□□ -1.08
LSM3-201ENST00000306024 BAALCQ8WXS3 180 aa8.3□□□□□ -1.08
LSM3-201ENST00000306024 BSNQ9UPA5 3926 aa8.3□□□□□ -1.08
LSM3-201ENST00000306024 IGKV3-7A0A075B6H7 116 aa8.29□□□□□ -1.08
LSM3-201ENST00000306024 LINC01619G3V211 115 aa8.29□□□□□ -1.08
LSM3-201ENST00000306024 C16orf92Q96LL3 132 aa8.29□□□□□ -1.08
LSM3-201ENST00000306024 NDPQ00604 133 aa8.29□□□□□ -1.08
LSM3-201ENST00000306024 C5orf56Q8N8D9 126 aa8.29□□□□□ -1.08
LSM3-201ENST00000306024 C11orf44Q8N8P7 122 aa8.29□□□□□ -1.08
LSM3-201ENST00000306024 C11orf86A6NJI1 115 aa8.29□□□□□ -1.08
LSM3-201ENST00000306024 I3L2K1 104 aa8.29□□□□□ -1.08
LSM3-201ENST00000306024 A0A0J9YY99 117 aa8.28□□□□□ -1.08
LSM3-201ENST00000306024 J3KT08 172 aa8.28□□□□□ -1.08
LSM3-201ENST00000306024 RPL39LQ96EH5 51 aaKnown RBP8.28□□□□□ -1.08
LSM3-201ENST00000306024 TRGV11A0A075B6L2 103 aa8.28□□□□□ -1.08
LSM3-201ENST00000306024 M0R2P5 195 aa8.28□□□□□ -1.08
LSM3-201ENST00000306024 PPP1R17O96001 155 aa8.28□□□□□ -1.08
LSM3-201ENST00000306024 EBI3Q14213 229 aa8.28□□□□□ -1.08
LSM3-201ENST00000306024 FAM74A4Q5TZK3 123 aa8.28□□□□□ -1.08
LSM3-201ENST00000306024 DPH3P1Q9H4G8 78 aa8.28□□□□□ -1.08
LSM3-201ENST00000306024 TRBV10-2A0A0K0K1G8 114 aa8.28□□□□□ -1.08
LSM3-201ENST00000306024 MRPS12O15235 138 aaKnown RBP8.28□□□□□ -1.08
LSM3-201ENST00000306024 LINC00694P0DN24 101 aa8.28□□□□□ -1.08
LSM3-201ENST00000306024 Q6Q795 121 aa8.28□□□□□ -1.08
LSM3-201ENST00000306024 FAM110DQ8TAY7 271 aaPredicted RBP8.28□□□□□ -1.08
LSM3-201ENST00000306024 TEX22C9J3V5 150 aa8.27□□□□□ -1.09
LSM3-201ENST00000306024 DUSP14O95147 198 aaKnown RBP8.27□□□□□ -1.09
LSM3-201ENST00000306024 SMR3AQ99954 134 aa8.27□□□□□ -1.09
LSM3-201ENST00000306024 A6NDX4 124 aa8.27□□□□□ -1.09
LSM3-201ENST00000306024 CRYGBP07316 175 aa8.27□□□□□ -1.09
LSM3-201ENST00000306024 K7EIM0 57 aa8.27□□□□□ -1.09
LSM3-201ENST00000306024 MUSTN1Q8IVN3 82 aa8.27□□□□□ -1.09
LSM3-201ENST00000306024 Q6ZS46 218 aa8.26□□□□□ -1.09
LSM3-201ENST00000306024 NEXN-AS1Q8NBZ9 246 aa8.26□□□□□ -1.09
LSM3-201ENST00000306024 TOMM6Q96B49 74 aa8.26□□□□□ -1.09
LSM3-201ENST00000306024 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.26□□□□□ -1.09
LSM3-201ENST00000306024 RASL10AQ92737 203 aa8.26□□□□□ -1.09
LSM3-201ENST00000306024 CELSR2Q9HCU4 2923 aa8.26□□□□□ -1.09
LSM3-201ENST00000306024 PRAC2D3DTV9 90 aa8.26□□□□□ -1.09
LSM3-201ENST00000306024 Q8N6K4 173 aa8.25□□□□□ -1.09
LSM3-201ENST00000306024 BAHCC1Q9P281 2608 aa8.25□□□□□ -1.09
LSM3-201ENST00000306024 ADARB2-AS1A8MUL3 147 aa8.25□□□□□ -1.09
LSM3-201ENST00000306024 IGHV3-33P01772 117 aa8.25□□□□□ -1.09
LSM3-201ENST00000306024 LOC107984640A0A0U1RRK4 108 aa8.25□□□□□ -1.09
LSM3-201ENST00000306024 LGALS9O00182 355 aa8.25□□□□□ -1.09
LSM3-201ENST00000306024 HERVK_113P63121 156 aa8.25□□□□□ -1.09
LSM3-201ENST00000306024 A0A1W2PRX2 142 aa8.24□□□□□ -1.09
LSM3-201ENST00000306024 LY6G6DO95868 133 aa8.24□□□□□ -1.09
LSM3-201ENST00000306024 SLC25A29Q8N8R3 303 aa8.24□□□□□ -1.09
LSM3-201ENST00000306024 DNAJC30Q96LL9 226 aa8.24□□□□□ -1.09
LSM3-201ENST00000306024 METTL26Q96S19 204 aa8.24□□□□□ -1.09
LSM3-201ENST00000306024 SPXQ9BT56 116 aa8.24□□□□□ -1.09
LSM3-201ENST00000306024 APCP25054 2843 aa8.24□□□□□ -1.09
LSM3-201ENST00000306024 Q6YL49 198 aa8.24□□□□□ -1.09
LSM3-201ENST00000306024 NRACQ8N912 160 aa8.24□□□□□ -1.09
LSM3-201ENST00000306024 AGPAT4-IT1Q9H0P7 198 aa8.24□□□□□ -1.09
LSM3-201ENST00000306024 CSDC2Q9Y534 153 aaKnown RBP8.24□□□□□ -1.09
LSM3-201ENST00000306024 SPENQ96T58 3664 aaKnown RBP8.24□□□□□ -1.09
LSM3-201ENST00000306024 IGHV3-30P01768 117 aa8.24□□□□□ -1.09
LSM3-201ENST00000306024 IGHG4P01861 327 aa8.24□□□□□ -1.09
LSM3-201ENST00000306024 IGHV3-30-5P0DP03 117 aa8.24□□□□□ -1.09
LSM3-201ENST00000306024 IGKV3D-20A0A0C4DH25 116 aa8.23□□□□□ -1.09
LSM3-201ENST00000306024 A0A096LNT2 108 aa8.23□□□□□ -1.09
LSM3-201ENST00000306024 IGHG2P01859 326 aa8.23□□□□□ -1.09
LSM3-201ENST00000306024 NDUFA7O95182 113 aa8.23□□□□□ -1.09
LSM3-201ENST00000306024 RNASE4P34096 147 aaKnown RBP8.23□□□□□ -1.09
LSM3-201ENST00000306024 CLEC2BQ92478 149 aa8.23□□□□□ -1.09
LSM3-201ENST00000306024 SMIM9A6NGZ8 99 aa8.22□□□□□ -1.09
LSM3-201ENST00000306024 INAFM1C9JVW0 142 aa8.22□□□□□ -1.09
LSM3-201ENST00000306024 RS1O15537 224 aa8.22□□□□□ -1.09
LSM3-201ENST00000306024 BRI3O95415 125 aa8.22□□□□□ -1.09
LSM3-201ENST00000306024 USMG5Q96IX5 58 aa8.22□□□□□ -1.09
LSM3-201ENST00000306024 IGLV11-55A0A075B6I3 123 aa8.22□□□□□ -1.09
LSM3-201ENST00000306024 TRBV7-1A0A0A6YYK4 115 aa8.22□□□□□ -1.09
LSM3-201ENST00000306024 TRAV21A0A0B4J279 112 aa8.22□□□□□ -1.09
LSM3-201ENST00000306024 RPL39P62891 51 aaKnown RBP8.22□□□□□ -1.09
LSM3-201ENST00000306024 ODF3Q96PU9 254 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 185.5 ms