RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 RPL39P62891 51 aaKnown RBP8.31□□□□□ -1.08
SCG2-201ENST00000305409 SCGB2A2Q13296 93 aa8.31□□□□□ -1.08
SCG2-201ENST00000305409 C2orf66Q6UXQ4 117 aa8.31□□□□□ -1.08
SCG2-201ENST00000305409 PCP2Q8IVA1 136 aa8.31□□□□□ -1.08
SCG2-201ENST00000305409 SPATA3Q8NHX4 192 aa8.31□□□□□ -1.08
SCG2-201ENST00000305409 SCGB3A1Q96QR1 104 aa8.31□□□□□ -1.08
SCG2-201ENST00000305409 NBEAL2Q6ZNJ1 2754 aa8.31□□□□□ -1.08
SCG2-201ENST00000305409 TRAV2A0A0B4J234 112 aa8.31□□□□□ -1.08
SCG2-201ENST00000305409 GTSCR1Q86UQ5 136 aa8.31□□□□□ -1.08
SCG2-201ENST00000305409 DEFB125Q8N687 156 aa8.31□□□□□ -1.08
SCG2-201ENST00000305409 MRPL16Q9NX20 251 aaKnown RBP8.31□□□□□ -1.08
SCG2-201ENST00000305409 TEP1Q99973 2627 aaKnown RBP8.3□□□□□ -1.08
SCG2-201ENST00000305409 M0QY20 66 aa8.3□□□□□ -1.08
SCG2-201ENST00000305409 RPL35AP18077 110 aaKnown RBP8.3□□□□□ -1.08
SCG2-201ENST00000305409 MPV17L2Q567V2 206 aa8.3□□□□□ -1.08
SCG2-201ENST00000305409 POM121L12Q8N7R1 296 aa8.3□□□□□ -1.08
SCG2-201ENST00000305409 IGKV2D-26A0A0A0MRZ7 120 aa8.3□□□□□ -1.08
SCG2-201ENST00000305409 A8MTW9 85 aa8.3□□□□□ -1.08
SCG2-201ENST00000305409 Q6ZSN1 163 aa8.3□□□□□ -1.08
SCG2-201ENST00000305409 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.29□□□□□ -1.08
SCG2-201ENST00000305409 POLR2KP53803 58 aaKnown RBP8.29□□□□□ -1.08
SCG2-201ENST00000305409 EMP1P54849 157 aa8.29□□□□□ -1.08
SCG2-201ENST00000305409 ORMDL2Q53FV1 153 aa8.29□□□□□ -1.08
SCG2-201ENST00000305409 ATP5LO75964 103 aa8.29□□□□□ -1.08
SCG2-201ENST00000305409 INSP01308 110 aa8.29□□□□□ -1.08
SCG2-201ENST00000305409 COX8AP10176 69 aa8.29□□□□□ -1.08
SCG2-201ENST00000305409 RNF151Q2KHN1 245 aa8.29□□□□□ -1.08
SCG2-201ENST00000305409 TOMM6Q96B49 74 aa8.29□□□□□ -1.08
SCG2-201ENST00000305409 HHLA3Q9XRX5 114 aa8.29□□□□□ -1.08
SCG2-201ENST00000305409 MRPS16Q9Y3D3 137 aaKnown RBP8.29□□□□□ -1.08
SCG2-201ENST00000305409 IGKCP01834 107 aa8.28□□□□□ -1.08
SCG2-201ENST00000305409 ERASQ7Z444 233 aa8.28□□□□□ -1.08
SCG2-201ENST00000305409 C1orf158Q8N1D5 194 aa8.28□□□□□ -1.08
SCG2-201ENST00000305409 TP53TG1Q9Y2A0 90 aa8.28□□□□□ -1.08
SCG2-201ENST00000305409 ZFP2Q6ZN57 461 aa8.28□□□□□ -1.08
SCG2-201ENST00000305409 OPRPNQ99935 248 aaPredicted RBP8.28□□□□□ -1.08
SCG2-201ENST00000305409 TRAV25A0A0B4J276 109 aa8.27□□□□□ -1.08
SCG2-201ENST00000305409 NDUFA7O95182 113 aa8.27□□□□□ -1.08
SCG2-201ENST00000305409 PF4P02776 101 aa8.27□□□□□ -1.08
SCG2-201ENST00000305409 FGF6P10767 208 aa8.27□□□□□ -1.08
SCG2-201ENST00000305409 C2orf91Q6ZV80 131 aa8.27□□□□□ -1.08
SCG2-201ENST00000305409 TRPT1Q86TN4 253 aaKnown RBP8.27□□□□□ -1.08
SCG2-201ENST00000305409 C11orf72Q8NBR9 251 aa8.27□□□□□ -1.08
SCG2-201ENST00000305409 ORAOV1Q8WV07 137 aa8.27□□□□□ -1.08
SCG2-201ENST00000305409 VPS25Q9BRG1 176 aa8.27□□□□□ -1.08
SCG2-201ENST00000305409 VCYO14598 125 aa8.27□□□□□ -1.09
SCG2-201ENST00000305409 CCL25O15444 150 aa8.27□□□□□ -1.09
SCG2-201ENST00000305409 DPM2O94777 84 aa8.27□□□□□ -1.09
SCG2-201ENST00000305409 KIR2DL4Q99706 377 aa8.27□□□□□ -1.09
SCG2-201ENST00000305409 A0A087WX48 190 aa8.26□□□□□ -1.09
SCG2-201ENST00000305409 M0R2P5 195 aa8.26□□□□□ -1.09
SCG2-201ENST00000305409 PPP1R17O96001 155 aa8.26□□□□□ -1.09
SCG2-201ENST00000305409 IGLV1-51P01701 117 aa8.26□□□□□ -1.09
SCG2-201ENST00000305409 ZNF415Q09FC8 603 aa8.26□□□□□ -1.09
SCG2-201ENST00000305409 COL5A1-AS1Q5SY13 56 aa8.26□□□□□ -1.09
SCG2-201ENST00000305409 BAALCQ8WXS3 180 aa8.26□□□□□ -1.09
SCG2-201ENST00000305409 TSHBP01222 138 aa8.26□□□□□ -1.09
SCG2-201ENST00000305409 IGHV3-53P01767 116 aa8.26□□□□□ -1.09
SCG2-201ENST00000305409 JMJD8Q96S16 334 aa8.26□□□□□ -1.09
SCG2-201ENST00000305409 ZMAT4Q9H898 229 aa8.26□□□□□ -1.09
SCG2-201ENST00000305409 PRSS29PA6NIE9 313 aa8.25□□□□□ -1.09
SCG2-201ENST00000305409 GIG44P09565 113 aaPredicted RBP8.25□□□□□ -1.09
SCG2-201ENST00000305409 IGHV3-38A0A0C4DH36 116 aa8.25□□□□□ -1.09
SCG2-201ENST00000305409 CFAP126Q5VTH2 177 aa8.25□□□□□ -1.09
SCG2-201ENST00000305409 CYSLTR1Q9Y271 337 aa8.25□□□□□ -1.09
SCG2-201ENST00000305409 TRGV1A0A0A0MS02 117 aa8.24□□□□□ -1.09
SCG2-201ENST00000305409 NEXN-AS1Q8NBZ9 246 aa8.24□□□□□ -1.09
SCG2-201ENST00000305409 C19orf73Q9NVV2 129 aa8.24□□□□□ -1.09
SCG2-201ENST00000305409 TRAV8-6A0A0B4J262 113 aa8.24□□□□□ -1.09
SCG2-201ENST00000305409 TRBV27A0A0K0K1C4 114 aa8.24□□□□□ -1.09
SCG2-201ENST00000305409 UBE2V1Q13404 147 aa8.24□□□□□ -1.09
SCG2-201ENST00000305409 PHLDA1Q8WV24 401 aaPredicted RBP8.24□□□□□ -1.09
SCG2-201ENST00000305409 BVES-AS1Q5T3Y7 98 aa8.23□□□□□ -1.09
SCG2-201ENST00000305409 BOD1L2Q8IYS8 172 aa8.23□□□□□ -1.09
SCG2-201ENST00000305409 TRBV6-5A0A0K0K1A5 114 aa8.23□□□□□ -1.09
SCG2-201ENST00000305409 H7C1H1 209 aa8.23□□□□□ -1.09
SCG2-201ENST00000305409 CEMP1Q6PRD7 247 aaPredicted RBP8.23□□□□□ -1.09
SCG2-201ENST00000305409 Q6ZTI0 123 aa8.23□□□□□ -1.09
SCG2-201ENST00000305409 IGIPA6NJ69 53 aa8.22□□□□□ -1.09
SCG2-201ENST00000305409 F8VRH5 84 aa8.22□□□□□ -1.09
SCG2-201ENST00000305409 UFSP1Q6NVU6 142 aa8.22□□□□□ -1.09
SCG2-201ENST00000305409 NDUFA11Q86Y39 141 aa8.22□□□□□ -1.09
SCG2-201ENST00000305409 MAPKAPK5-AS1Q8N8E1 139 aa8.22□□□□□ -1.09
SCG2-201ENST00000305409 NOP10Q9NPE3 64 aaKnown RBP8.22□□□□□ -1.09
SCG2-201ENST00000305409 A8MWV9 139 aa8.22□□□□□ -1.09
SCG2-201ENST00000305409 RNASE13Q5GAN3 156 aaKnown RBP8.22□□□□□ -1.09
SCG2-201ENST00000305409 LINC00482Q8N8I6 264 aa8.22□□□□□ -1.09
SCG2-201ENST00000305409 K7EMI3 77 aa8.21□□□□□ -1.09
SCG2-201ENST00000305409 BEAN1Q3B7T3 259 aa8.21□□□□□ -1.09
SCG2-201ENST00000305409 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.21□□□□□ -1.09
SCG2-201ENST00000305409 ZNF479Q96JC4 524 aa8.21□□□□□ -1.09
SCG2-201ENST00000305409 I3L3M4 83 aa8.21□□□□□ -1.1
SCG2-201ENST00000305409 TNFRSF18Q9Y5U5 241 aa8.21□□□□□ -1.1
SCG2-201ENST00000305409 RPL32P62910 135 aaKnown RBP8.2□□□□□ -1.1
SCG2-201ENST00000305409 TRAV12-1A0A0B4J245 112 aa8.2□□□□□ -1.1
SCG2-201ENST00000305409 C11orf86A6NJI1 115 aa8.19□□□□□ -1.1
SCG2-201ENST00000305409 PLNP26678 52 aa8.19□□□□□ -1.1
SCG2-201ENST00000305409 RIPPLY3P57055 190 aa8.19□□□□□ -1.1
SCG2-201ENST00000305409 OCIAD2Q56VL3 154 aa8.19□□□□□ -1.1
SCG2-201ENST00000305409 OR4C5Q8NGB2 326 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms