RNA–Protein interactions for RNA: ENST00000302118.5

PCSK9-201, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCSK9, Length 3,637 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-201ENST00000302118 LINC01549A6NIU2 74 aa9.18□□□□□ -0.94
PCSK9-201ENST00000302118 HOXA3O43365 443 aaPredicted RBP9.18□□□□□ -0.94
PCSK9-201ENST00000302118 IGHV3-53P01767 116 aa9.18□□□□□ -0.94
PCSK9-201ENST00000302118 CEMP1Q6PRD7 247 aaPredicted RBP9.18□□□□□ -0.94
PCSK9-201ENST00000302118 IGKV3OR2-268A0A0C4DH90 116 aa9.17□□□□□ -0.94
PCSK9-201ENST00000302118 RNASE3P12724 160 aaKnown RBP9.17□□□□□ -0.94
PCSK9-201ENST00000302118 TCTEX1D4Q5JR98 221 aa9.17□□□□□ -0.94
PCSK9-201ENST00000302118 LGALS3P17931 250 aaKnown RBP9.17□□□□□ -0.94
PCSK9-201ENST00000302118 C12orf74Q32Q52 190 aa9.17□□□□□ -0.94
PCSK9-201ENST00000302118 APRG1Q8IVJ8 170 aa9.17□□□□□ -0.94
PCSK9-201ENST00000302118 TEX29Q8N6K0 151 aa9.17□□□□□ -0.94
PCSK9-201ENST00000302118 BAALCQ8WXS3 180 aa9.17□□□□□ -0.94
PCSK9-201ENST00000302118 SPXQ9BT56 116 aa9.17□□□□□ -0.94
PCSK9-201ENST00000302118 IGHV4OR15-8A0A075B7B6 117 aa9.17□□□□□ -0.94
PCSK9-201ENST00000302118 A0A087WW49 117 aa9.17□□□□□ -0.94
PCSK9-201ENST00000302118 PLEKHB2Q96CS7 222 aa9.17□□□□□ -0.94
PCSK9-201ENST00000302118 SPANXB1Q9NS25 103 aaPredicted RBP9.17□□□□□ -0.94
PCSK9-201ENST00000302118 MYMXA0A1B0GTQ4 84 aa9.16□□□□□ -0.94
PCSK9-201ENST00000302118 A6NDX4 124 aa9.16□□□□□ -0.94
PCSK9-201ENST00000302118 C11orf86A6NJI1 115 aa9.16□□□□□ -0.94
PCSK9-201ENST00000302118 PROK1P58294 105 aa9.16□□□□□ -0.94
PCSK9-201ENST00000302118 TTC32Q5I0X7 151 aa9.16□□□□□ -0.94
PCSK9-201ENST00000302118 DGAT2L7PQ6IED9 249 aa9.16□□□□□ -0.94
PCSK9-201ENST00000302118 LINC01587Q99440 93 aa9.16□□□□□ -0.94
PCSK9-201ENST00000302118 TRBV7-9A0A0J9YWB2 115 aa9.16□□□□□ -0.94
PCSK9-201ENST00000302118 HOXD3P31249 432 aaPredicted RBP9.16□□□□□ -0.94
PCSK9-201ENST00000302118 HIST2H2BCQ6DN03 193 aa9.16□□□□□ -0.94
PCSK9-201ENST00000302118 ITPR3Q14573 2671 aa9.16□□□□□ -0.94
PCSK9-201ENST00000302118 XCL2Q9UBD3 114 aa9.15□□□□□ -0.94
PCSK9-201ENST00000302118 SIVA1O15304 175 aa9.15□□□□□ -0.94
PCSK9-201ENST00000302118 CNFNQ9BYD5 112 aa9.15□□□□□ -0.94
PCSK9-201ENST00000302118 MXRA5Q9NR99 2828 aa9.15□□□□□ -0.95
PCSK9-201ENST00000302118 VCYO14598 125 aa9.14□□□□□ -0.95
PCSK9-201ENST00000302118 VCX2Q9H322 139 aa9.14□□□□□ -0.95
PCSK9-201ENST00000302118 F8W1H4 67 aa9.14□□□□□ -0.95
PCSK9-201ENST00000302118 ZFAND6Q6FIF0 208 aa9.14□□□□□ -0.95
PCSK9-201ENST00000302118 ZFP2Q6ZN57 461 aa9.14□□□□□ -0.95
PCSK9-201ENST00000302118 ZNF625Q96I27 306 aaPredicted RBP9.14□□□□□ -0.95
PCSK9-201ENST00000302118 U3KQE9 123 aa9.14□□□□□ -0.95
PCSK9-201ENST00000302118 MUC4Q99102 2169 aa9.14□□□□□ -0.95
PCSK9-201ENST00000302118 IGLV2-18A0A075B6J9 118 aa9.13□□□□□ -0.95
PCSK9-201ENST00000302118 IGLL5B9A064 214 aa9.13□□□□□ -0.95
PCSK9-201ENST00000302118 GAGE5Q13069 117 aa9.13□□□□□ -0.95
PCSK9-201ENST00000302118 GAGE6Q13070 117 aa9.13□□□□□ -0.95
PCSK9-201ENST00000302118 TNFRSF18Q9Y5U5 241 aa9.13□□□□□ -0.95
PCSK9-201ENST00000302118 MRPL53Q96EL3 112 aaKnown RBP9.13□□□□□ -0.95
PCSK9-201ENST00000302118 NBEAL2Q6ZNJ1 2754 aa9.13□□□□□ -0.95
PCSK9-201ENST00000302118 CD28P10747 220 aa9.13□□□□□ -0.95
PCSK9-201ENST00000302118 IGHV1OR15-1A0A075B7D0 117 aa9.12□□□□□ -0.95
PCSK9-201ENST00000302118 KRTAP10-9P60411 292 aa9.12□□□□□ -0.95
PCSK9-201ENST00000302118 LINC01356Q8N9X3 169 aa9.12□□□□□ -0.95
PCSK9-201ENST00000302118 YAE1D1Q9NRH1 226 aa9.12□□□□□ -0.95
PCSK9-201ENST00000302118 A0A0J9YXV3 536 aa9.12□□□□□ -0.95
PCSK9-201ENST00000302118 FOXI2Q6ZQN5 318 aa9.12□□□□□ -0.95
PCSK9-201ENST00000302118 C1QTNF4Q9BXJ3 329 aa9.12□□□□□ -0.95
PCSK9-201ENST00000302118 LGALS1P09382 135 aaKnown RBP9.12□□□□□ -0.95
PCSK9-201ENST00000302118 CFHR3Q02985 330 aa9.11□□□□□ -0.95
PCSK9-201ENST00000302118 TOMM6Q96B49 74 aa9.11□□□□□ -0.95
PCSK9-201ENST00000302118 PMVKQ15126 192 aa9.11□□□□□ -0.95
PCSK9-201ENST00000302118 COX8CQ7Z4L0 72 aa9.11□□□□□ -0.95
PCSK9-201ENST00000302118 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.1□□□□□ -0.95
PCSK9-201ENST00000302118 IGKV2-29A2NJV5 120 aaPredicted RBP9.1□□□□□ -0.95
PCSK9-201ENST00000302118 PPP1R17O96001 155 aa9.1□□□□□ -0.95
PCSK9-201ENST00000302118 GAGE2BQ13066 116 aa9.1□□□□□ -0.95
PCSK9-201ENST00000302118 GAGE2EQ4V326 116 aa9.1□□□□□ -0.95
PCSK9-201ENST00000302118 GAGE2DQ9UEU5 116 aa9.1□□□□□ -0.95
PCSK9-201ENST00000302118 LENEPQ9Y5L5 61 aa9.1□□□□□ -0.95
PCSK9-201ENST00000302118 SNCGO76070 127 aa9.1□□□□□ -0.95
PCSK9-201ENST00000302118 XGP55808 180 aa9.1□□□□□ -0.95
PCSK9-201ENST00000302118 NEXN-AS1Q8NBZ9 246 aa9.1□□□□□ -0.95
PCSK9-201ENST00000302118 Q96MF0 132 aa9.1□□□□□ -0.95
PCSK9-201ENST00000302118 BBC3Q96PG8 261 aaPredicted RBP9.1□□□□□ -0.95
PCSK9-201ENST00000302118 ZNF580Q9UK33 172 aa9.09□□□□□ -0.95
PCSK9-201ENST00000302118 A8MZ25 164 aa9.09□□□□□ -0.95
PCSK9-201ENST00000302118 SRSF2Q01130 221 aaKnown RBP9.09□□□□□ -0.95
PCSK9-201ENST00000302118 DCANP1Q8TF63 244 aa9.09□□□□□ -0.95
PCSK9-201ENST00000302118 Q9UF83 564 aa9.09□□□□□ -0.95
PCSK9-201ENST00000302118 A0A0J9YX75 114 aa9.09□□□□□ -0.96
PCSK9-201ENST00000302118 TMEM61Q8N0U2 210 aa9.09□□□□□ -0.96
PCSK9-201ENST00000302118 NIPBLQ6KC79 2804 aaeCLIP9.08□□□□□ -0.962e-6■■■■■ 39
PCSK9-201ENST00000302118 TRAV8-3A0A0A6YYJ7 113 aa9.08□□□□□ -0.96
PCSK9-201ENST00000302118 SOCS3O14543 225 aa9.08□□□□□ -0.96
PCSK9-201ENST00000302118 FOXI1Q12951 378 aa9.08□□□□□ -0.96
PCSK9-201ENST00000302118 PSMG3-AS1Q96PY0 264 aa9.08□□□□□ -0.96
PCSK9-201ENST00000302118 Q6ZUT4 128 aa9.07□□□□□ -0.96
PCSK9-201ENST00000302118 DAND5Q8N907 189 aa9.07□□□□□ -0.96
PCSK9-201ENST00000302118 TRGV1A0A0A0MS02 117 aa9.07□□□□□ -0.96
PCSK9-201ENST00000302118 J3QQQ9 107 aa9.07□□□□□ -0.96
PCSK9-201ENST00000302118 RRN3P1Q2M238 152 aa9.07□□□□□ -0.96
PCSK9-201ENST00000302118 HELZ2Q9BYK8 2649 aaKnown RBP9.07□□□□□ -0.96
PCSK9-201ENST00000302118 SPATA25Q9BR10 227 aa9.07□□□□□ -0.96
PCSK9-201ENST00000302118 FLNBO75369 2602 aaKnown RBP9.06□□□□□ -0.96
PCSK9-201ENST00000302118 VPREB3Q9UKI3 123 aa9.06□□□□□ -0.96
PCSK9-201ENST00000302118 PSMB8P28062 276 aa9.06□□□□□ -0.96
PCSK9-201ENST00000302118 IGLV1-40P01703 118 aa9.06□□□□□ -0.96
PCSK9-201ENST00000302118 RPL35AP18077 110 aaKnown RBP9.06□□□□□ -0.96
PCSK9-201ENST00000302118 ZMAT4Q9H898 229 aa9.06□□□□□ -0.96
PCSK9-201ENST00000302118 GCN1Q92616 2671 aaKnown RBP9.06□□□□□ -0.96
PCSK9-201ENST00000302118 TRAV13-1A0A0B4J241 112 aa9.05□□□□□ -0.96
PCSK9-201ENST00000302118 FAM110AQ9BQ89 295 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms