RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 TRAV9-2A0A087WT02 112 aa12.28□□□□□ -0.44
SPSB3-201ENST00000301717 ADIRFQ15847 76 aa12.28□□□□□ -0.44
SPSB3-201ENST00000301717 TMEM241Q24JQ0 296 aa12.28□□□□□ -0.44
SPSB3-201ENST00000301717 COMMD7Q86VX2 200 aa12.28□□□□□ -0.44
SPSB3-201ENST00000301717 ISOC2Q96AB3 205 aa12.28□□□□□ -0.44
SPSB3-201ENST00000301717 CNFNQ9BYD5 112 aa12.28□□□□□ -0.44
SPSB3-201ENST00000301717 M0QY20 66 aa12.28□□□□□ -0.44
SPSB3-201ENST00000301717 SLC7A5P1Q8MH63 180 aa12.28□□□□□ -0.44
SPSB3-201ENST00000301717 OSTCQ9NRP0 149 aa12.28□□□□□ -0.44
SPSB3-201ENST00000301717 A8MWL6 223 aa12.27□□□□□ -0.45
SPSB3-201ENST00000301717 TRGC1P0CF51 173 aa12.27□□□□□ -0.45
SPSB3-201ENST00000301717 DEFB104AQ8WTQ1 72 aa12.27□□□□□ -0.45
SPSB3-201ENST00000301717 DPH3P1Q9H4G8 78 aa12.27□□□□□ -0.45
SPSB3-201ENST00000301717 Q9HAA7 133 aa12.27□□□□□ -0.45
SPSB3-201ENST00000301717 V9GYV3 84 aa12.27□□□□□ -0.45
SPSB3-201ENST00000301717 TRAV26-2A0A0B4J265 109 aa12.26□□□□□ -0.45
SPSB3-201ENST00000301717 FAM74A3Q4VXF1 159 aa12.26□□□□□ -0.45
SPSB3-201ENST00000301717 CT83Q5H943 113 aa12.26□□□□□ -0.45
SPSB3-201ENST00000301717 WDR73Q6P4I2 378 aa12.26□□□□□ -0.45
SPSB3-201ENST00000301717 DAZ4Q86SG3 579 aaKnown RBP12.26□□□□□ -0.45
SPSB3-201ENST00000301717 DAZ3Q9NR90 486 aaKnown RBP12.26□□□□□ -0.45
SPSB3-201ENST00000301717 NAT8Q9UHE5 227 aa12.26□□□□□ -0.45
SPSB3-201ENST00000301717 FUSP35637 526 aaKnown RBP eCLIP12.25□□□□□ -0.45
SPSB3-201ENST00000301717 TSKUQ8WUA8 353 aa12.25□□□□□ -0.45
SPSB3-201ENST00000301717 A0A087WWC5 75 aa12.24□□□□□ -0.45
SPSB3-201ENST00000301717 HIGD1CA8MV81 97 aa12.24□□□□□ -0.45
SPSB3-201ENST00000301717 DNAJC30Q96LL9 226 aa12.24□□□□□ -0.45
SPSB3-201ENST00000301717 SMDT1Q9H4I9 107 aa12.24□□□□□ -0.45
SPSB3-201ENST00000301717 IBA57-AS1B1ANH7 110 aa12.23□□□□□ -0.45
SPSB3-201ENST00000301717 BTF3P20290 206 aaKnown RBP12.23□□□□□ -0.45
SPSB3-201ENST00000301717 UQCC3Q6UW78 93 aa12.23□□□□□ -0.45
SPSB3-201ENST00000301717 NTM-AS1Q6ZSK4 140 aa12.23□□□□□ -0.45
SPSB3-201ENST00000301717 NIT1Q86X76 327 aa12.23□□□□□ -0.45
SPSB3-201ENST00000301717 C10orf126Q8N4M7 172 aa12.23□□□□□ -0.45
SPSB3-201ENST00000301717 TRBV6-8A0A0A6YYG3 113 aa12.22□□□□□ -0.45
SPSB3-201ENST00000301717 KRTAP10-2P60368 255 aa12.22□□□□□ -0.45
SPSB3-201ENST00000301717 RASL11AQ6T310 242 aa12.22□□□□□ -0.45
SPSB3-201ENST00000301717 C15orf54Q8N8G6 183 aa12.22□□□□□ -0.45
SPSB3-201ENST00000301717 GATD1Q8NB37 220 aa12.22□□□□□ -0.45
SPSB3-201ENST00000301717 KIAA1109Q2LD37 5005 aa12.22□□□□□ -0.45
SPSB3-201ENST00000301717 SPATA12Q7Z6I5 190 aa12.21□□□□□ -0.45
SPSB3-201ENST00000301717 LRP1BQ9NZR2 4599 aa12.21□□□□□ -0.45
SPSB3-201ENST00000301717 DNAH5Q8TE73 4624 aa12.21□□□□□ -0.45
SPSB3-201ENST00000301717 K7EP13 123 aa12.2□□□□□ -0.46
SPSB3-201ENST00000301717 GAS8-AS1O95177 125 aa12.2□□□□□ -0.46
SPSB3-201ENST00000301717 NFE4Q86UQ8 179 aa12.2□□□□□ -0.46
SPSB3-201ENST00000301717 NUP35Q8NFH5 326 aa12.2□□□□□ -0.46
SPSB3-201ENST00000301717 RPL39LQ96EH5 51 aaKnown RBP12.2□□□□□ -0.46
SPSB3-201ENST00000301717 H7C1H1 209 aa12.2□□□□□ -0.46
SPSB3-201ENST00000301717 GFRA4Q9GZZ7 299 aa12.2□□□□□ -0.46
SPSB3-201ENST00000301717 A0A1B0GUT8 65 aa12.19□□□□□ -0.46
SPSB3-201ENST00000301717 TMEM262E9PQX1 116 aa12.19□□□□□ -0.46
SPSB3-201ENST00000301717 NIT2Q9NQR4 276 aa12.19□□□□□ -0.46
SPSB3-201ENST00000301717 SMIM15Q7Z3B0 74 aa12.18□□□□□ -0.46
SPSB3-201ENST00000301717 BORCS7Q96B45 105 aa12.18□□□□□ -0.46
SPSB3-201ENST00000301717 CHCHD5Q9BSY4 110 aa12.18□□□□□ -0.46
SPSB3-201ENST00000301717 KLK12Q9UKR0 248 aa12.18□□□□□ -0.46
SPSB3-201ENST00000301717 URGCP-MRPS24S4R325 110 aa12.18□□□□□ -0.46
SPSB3-201ENST00000301717 A0A087WTM6 91 aa12.17□□□□□ -0.46
SPSB3-201ENST00000301717 A0A087WX48 190 aa12.17□□□□□ -0.46
SPSB3-201ENST00000301717 FAM231BA6NCW3 169 aa12.17□□□□□ -0.46
SPSB3-201ENST00000301717 GAGE6Q13070 117 aa12.17□□□□□ -0.46
SPSB3-201ENST00000301717 MPV17L2Q567V2 206 aa12.17□□□□□ -0.46
SPSB3-201ENST00000301717 Q8N976 141 aa12.17□□□□□ -0.46
SPSB3-201ENST00000301717 C16orf90A8MZG2 172 aa12.16□□□□□ -0.46
SPSB3-201ENST00000301717 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.16□□□□□ -0.46
SPSB3-201ENST00000301717 PSCAO43653 123 aa12.15□□□□□ -0.46
SPSB3-201ENST00000301717 AMN1Q8IY45 258 aa12.15□□□□□ -0.46
SPSB3-201ENST00000301717 RNF185Q96GF1 192 aa12.15□□□□□ -0.46
SPSB3-201ENST00000301717 NAT8BQ9UHF3 227 aa12.15□□□□□ -0.46
SPSB3-201ENST00000301717 SMIM27A0A1W2PRY6 76 aa12.14□□□□□ -0.47
SPSB3-201ENST00000301717 LAGE3Q14657 143 aa12.14□□□□□ -0.47
SPSB3-201ENST00000301717 UBE2WQ96B02 151 aa12.14□□□□□ -0.47
SPSB3-201ENST00000301717 TMEM191AQ9H0A3 160 aa12.14□□□□□ -0.47
SPSB3-201ENST00000301717 HERC2O95714 4834 aa12.13□□□□□ -0.47
SPSB3-201ENST00000301717 TRBV25-1A0A075B6N4 114 aa12.13□□□□□ -0.47
SPSB3-201ENST00000301717 TMEM218A2RU14 115 aa12.13□□□□□ -0.47
SPSB3-201ENST00000301717 SMKR1H3BMG3 65 aa12.13□□□□□ -0.47
SPSB3-201ENST00000301717 WFDC2Q14508 124 aa12.13□□□□□ -0.47
SPSB3-201ENST00000301717 ATRAIDQ6UW56 229 aa12.13□□□□□ -0.47
SPSB3-201ENST00000301717 IGHV1-24A0A0C4DH33 117 aa12.12□□□□□ -0.47
SPSB3-201ENST00000301717 LRCOL1A6NCL2 159 aa12.12□□□□□ -0.47
SPSB3-201ENST00000301717 NCR2O95944 276 aa12.12□□□□□ -0.47
SPSB3-201ENST00000301717 RPS10P46783 165 aaKnown RBP12.12□□□□□ -0.47
SPSB3-201ENST00000301717 RIGQ13278 110 aa12.12□□□□□ -0.47
SPSB3-201ENST00000301717 IQCJQ1A5X6 159 aa12.12□□□□□ -0.47
SPSB3-201ENST00000301717 LECT2O14960 151 aa12.11□□□□□ -0.47
SPSB3-201ENST00000301717 RAB4AP20338 218 aa12.11□□□□□ -0.47
SPSB3-201ENST00000301717 CAMPP49913 170 aa12.11□□□□□ -0.47
SPSB3-201ENST00000301717 RBX1P62877 108 aa12.11□□□□□ -0.47
SPSB3-201ENST00000301717 MRPL54Q6P161 138 aaKnown RBP12.11□□□□□ -0.47
SPSB3-201ENST00000301717 KCNIP4Q6PIL6 250 aa12.11□□□□□ -0.47
SPSB3-201ENST00000301717 CLPSL2Q6UWE3 100 aa12.11□□□□□ -0.47
SPSB3-201ENST00000301717 MAPKAPK5-AS1Q8N8E1 139 aa12.11□□□□□ -0.47
SPSB3-201ENST00000301717 TRAV8-3A0A0A6YYJ7 113 aa12.11□□□□□ -0.47
SPSB3-201ENST00000301717 F8W036 122 aa12.11□□□□□ -0.47
SPSB3-201ENST00000301717 ANGP03950 147 aaKnown RBP12.11□□□□□ -0.47
SPSB3-201ENST00000301717 ADCYAP1P18509 176 aa12.11□□□□□ -0.47
SPSB3-201ENST00000301717 TMEM97Q5BJF2 176 aa12.11□□□□□ -0.47
SPSB3-201ENST00000301717 CHCHD7Q9BUK0 85 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms