RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 M0R2P5 195 aa10.84□□□□□ -0.67
CDT1-201ENST00000301019 C3orf22Q8N5N4 141 aa10.84□□□□□ -0.67
CDT1-201ENST00000301019 IGKV3D-7A0A0C4DH55 119 aa10.83□□□□□ -0.68
CDT1-201ENST00000301019 RNF223E7ERA6 249 aa10.83□□□□□ -0.68
CDT1-201ENST00000301019 K7ENP7 123 aa10.83□□□□□ -0.68
CDT1-201ENST00000301019 Q6Q795 121 aa10.83□□□□□ -0.68
CDT1-201ENST00000301019 PIEZO1Q92508 2521 aa10.83□□□□□ -0.68
CDT1-201ENST00000301019 SDIM1Q6ZPB5 146 aa10.83□□□□□ -0.68
CDT1-201ENST00000301019 I3L3M4 83 aa10.82□□□□□ -0.68
CDT1-201ENST00000301019 IGLV1-47P01700 117 aa10.82□□□□□ -0.68
CDT1-201ENST00000301019 COX6CP09669 75 aa10.82□□□□□ -0.68
CDT1-201ENST00000301019 A0A087WVE0 104 aa10.82□□□□□ -0.68
CDT1-201ENST00000301019 PSMG3-AS1Q96PY0 264 aa10.82□□□□□ -0.68
CDT1-201ENST00000301019 ATRXP46100 2492 aa10.82□□□□□ -0.68
CDT1-201ENST00000301019 IGLV11-55A0A075B6I3 123 aa10.81□□□□□ -0.68
CDT1-201ENST00000301019 A0A0J9YXY3 114 aa10.81□□□□□ -0.68
CDT1-201ENST00000301019 BUB3O43684 328 aa10.81□□□□□ -0.68
CDT1-201ENST00000301019 C9orf47Q6ZRZ4 202 aa10.81□□□□□ -0.68
CDT1-201ENST00000301019 C20orf173Q96LM9 149 aa10.81□□□□□ -0.68
CDT1-201ENST00000301019 CSPG4Q6UVK1 2322 aa10.81□□□□□ -0.68
CDT1-201ENST00000301019 IGIPA6NJ69 53 aa10.81□□□□□ -0.68
CDT1-201ENST00000301019 J3KT08 172 aa10.81□□□□□ -0.68
CDT1-201ENST00000301019 LINC00311Q8N616 119 aa10.81□□□□□ -0.68
CDT1-201ENST00000301019 M0R1W7 72 aa10.8□□□□□ -0.68
CDT1-201ENST00000301019 GPHB5Q86YW7 130 aa10.8□□□□□ -0.68
CDT1-201ENST00000301019 KLK9Q9UKQ9 250 aa10.8□□□□□ -0.68
CDT1-201ENST00000301019 SONP18583 2426 aaKnown RBP10.8□□□□□ -0.68
CDT1-201ENST00000301019 Q9HAA7 133 aa10.8□□□□□ -0.68
CDT1-201ENST00000301019 IGF2RP11717 2491 aa10.8□□□□□ -0.68
CDT1-201ENST00000301019 SUMO4Q6EEV6 95 aa10.79□□□□□ -0.68
CDT1-201ENST00000301019 VPS13CQ709C8 3753 aa10.79□□□□□ -0.68
CDT1-201ENST00000301019 TMEM223A0PJW6 202 aa10.79□□□□□ -0.68
CDT1-201ENST00000301019 WNK1Q9H4A3 2382 aa10.79□□□□□ -0.68
CDT1-201ENST00000301019 TMEM30BQ3MIR4 351 aa10.79□□□□□ -0.68
CDT1-201ENST00000301019 POM121L12Q8N7R1 296 aa10.79□□□□□ -0.68
CDT1-201ENST00000301019 SRSF2Q01130 221 aaKnown RBP10.78□□□□□ -0.68
CDT1-201ENST00000301019 VMO1Q7Z5L0 202 aa10.78□□□□□ -0.68
CDT1-201ENST00000301019 P0DMU3 169 aa10.78□□□□□ -0.68
CDT1-201ENST00000301019 FAM231AP0DMU4 169 aa10.78□□□□□ -0.68
CDT1-201ENST00000301019 FAM231CP0DMU5 169 aa10.78□□□□□ -0.68
CDT1-201ENST00000301019 IGHV3-30-3P0DP02 117 aa10.78□□□□□ -0.68
CDT1-201ENST00000301019 CIRBPQ14011 172 aaKnown RBP10.77□□□□□ -0.68
CDT1-201ENST00000301019 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.77□□□□□ -0.69
CDT1-201ENST00000301019 UCNP55089 124 aa10.77□□□□□ -0.69
CDT1-201ENST00000301019 C10orf105Q8TEF2 133 aa10.77□□□□□ -0.69
CDT1-201ENST00000301019 FAM215AQ9Y5M1 114 aa10.77□□□□□ -0.69
CDT1-201ENST00000301019 SETD2Q9BYW2 2564 aaPredicted RBP10.77□□□□□ -0.69
CDT1-201ENST00000301019 TRAV12-2A0A075B6T6 113 aa10.77□□□□□ -0.69
CDT1-201ENST00000301019 NCOR2Q9Y618 2525 aa10.76□□□□□ -0.69
CDT1-201ENST00000301019 A0A0B4J2C4 111 aa10.76□□□□□ -0.69
CDT1-201ENST00000301019 ZNF876PQ49A33 203 aa10.76□□□□□ -0.69
CDT1-201ENST00000301019 F5H768 121 aa10.76□□□□□ -0.69
CDT1-201ENST00000301019 UQCRQO14949 82 aa10.76□□□□□ -0.69
CDT1-201ENST00000301019 EBI3Q14213 229 aa10.76□□□□□ -0.69
CDT1-201ENST00000301019 COX8CQ7Z4L0 72 aa10.76□□□□□ -0.69
CDT1-201ENST00000301019 IGHV3-11P01762 117 aa10.75□□□□□ -0.69
CDT1-201ENST00000301019 DAZ2Q13117 558 aaKnown RBP10.75□□□□□ -0.69
CDT1-201ENST00000301019 DAZ4Q86SG3 579 aaKnown RBP10.75□□□□□ -0.69
CDT1-201ENST00000301019 TIMM21Q9BVV7 248 aa10.75□□□□□ -0.69
CDT1-201ENST00000301019 DAZ1Q9NQZ3 744 aaKnown RBP10.75□□□□□ -0.69
CDT1-201ENST00000301019 DAZ3Q9NR90 486 aaKnown RBP10.75□□□□□ -0.69
CDT1-201ENST00000301019 NDUFA12Q9UI09 145 aa10.75□□□□□ -0.69
CDT1-201ENST00000301019 RNASE6Q93091 150 aaKnown RBP10.75□□□□□ -0.69
CDT1-201ENST00000301019 A0A0G2JNJ9 132 aa10.75□□□□□ -0.69
CDT1-201ENST00000301019 OXTP01178 125 aa10.75□□□□□ -0.69
CDT1-201ENST00000301019 Q9UFV3 132 aa10.75□□□□□ -0.69
CDT1-201ENST00000301019 TRBV30A0A0K0K1B3 111 aa10.74□□□□□ -0.69
CDT1-201ENST00000301019 A0A1B0GX51 115 aa10.74□□□□□ -0.69
CDT1-201ENST00000301019 RNASE3P12724 160 aaKnown RBP10.74□□□□□ -0.69
CDT1-201ENST00000301019 DPM3Q9P2X0 92 aa10.74□□□□□ -0.69
CDT1-201ENST00000301019 LEPROTO15243 131 aa10.74□□□□□ -0.69
CDT1-201ENST00000301019 PRM2P04554 102 aa10.74□□□□□ -0.69
CDT1-201ENST00000301019 PAPPA-AS1Q5QFB9 102 aa10.74□□□□□ -0.69
CDT1-201ENST00000301019 Q8NA96 180 aa10.74□□□□□ -0.69
CDT1-201ENST00000301019 OR13C6PQ8NH95 151 aa10.73□□□□□ -0.69
CDT1-201ENST00000301019 TRAV25A0A0B4J276 109 aa10.73□□□□□ -0.69
CDT1-201ENST00000301019 WFDC9Q8NEX5 89 aa10.73□□□□□ -0.69
CDT1-201ENST00000301019 IGHV3OR16-10A0A075B7F0 116 aa10.73□□□□□ -0.69
CDT1-201ENST00000301019 KNCNA6PVL3 124 aa10.73□□□□□ -0.69
CDT1-201ENST00000301019 VCYO14598 125 aa10.73□□□□□ -0.69
CDT1-201ENST00000301019 CD28P10747 220 aa10.73□□□□□ -0.69
CDT1-201ENST00000301019 Q8N2B8 174 aa10.73□□□□□ -0.69
CDT1-201ENST00000301019 TRAV21A0A0B4J279 112 aa10.72□□□□□ -0.69
CDT1-201ENST00000301019 TRBV7-7A0A0K0K1E9 115 aa10.72□□□□□ -0.69
CDT1-201ENST00000301019 ZFAND2AQ8N6M9 145 aa10.72□□□□□ -0.69
CDT1-201ENST00000301019 Q9UF83 564 aa10.72□□□□□ -0.69
CDT1-201ENST00000301019 TRBV12-3P01733 135 aa10.72□□□□□ -0.69
CDT1-201ENST00000301019 BSNQ9UPA5 3926 aa10.71□□□□□ -0.69
CDT1-201ENST00000301019 LST1O00453 97 aa10.71□□□□□ -0.69
CDT1-201ENST00000301019 TRACP01848 142 aa10.71□□□□□ -0.69
CDT1-201ENST00000301019 LINC00526Q96FQ7 95 aa10.71□□□□□ -0.69
CDT1-201ENST00000301019 CHD8Q9HCK8 2581 aa10.71□□□□□ -0.69
CDT1-201ENST00000301019 ATP6V0E1O15342 81 aa10.71□□□□□ -0.69
CDT1-201ENST00000301019 PROK1P58294 105 aa10.71□□□□□ -0.69
CDT1-201ENST00000301019 UNQ9165/PRO28630Q6UXU0 137 aa10.71□□□□□ -0.69
CDT1-201ENST00000301019 TMEM219Q86XT9 240 aa10.71□□□□□ -0.69
CDT1-201ENST00000301019 PKIGQ9Y2B9 76 aa10.71□□□□□ -0.69
CDT1-201ENST00000301019 IGHV3-38A0A0C4DH36 116 aa10.71□□□□□ -0.7
CDT1-201ENST00000301019 EDN2P20800 178 aa10.71□□□□□ -0.7
CDT1-201ENST00000301019 HIST1H4AP62805 103 aaKnown RBP10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms