RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 APOC4P55056 127 aa12.59□□□□□ -0.39
SNAPC4-201ENST00000298532 TMEM61Q8N0U2 210 aa12.59□□□□□ -0.39
SNAPC4-201ENST00000298532 K7EMT4 169 aa12.59□□□□□ -0.39
SNAPC4-201ENST00000298532 MIAQ16674 131 aa12.59□□□□□ -0.39
SNAPC4-201ENST00000298532 FUSP35637 526 aaKnown RBP eCLIP12.59□□□□□ -0.39
SNAPC4-201ENST00000298532 LINC00574Q9H8X3 128 aa12.59□□□□□ -0.39
SNAPC4-201ENST00000298532 IGHV4-59P01825 116 aa12.58□□□□□ -0.4
SNAPC4-201ENST00000298532 C5orf56Q8N8D9 126 aa12.58□□□□□ -0.4
SNAPC4-201ENST00000298532 PTPRQQ9UMZ3 2332 aa12.58□□□□□ -0.4
SNAPC4-201ENST00000298532 DEFB112Q30KQ8 113 aa12.57□□□□□ -0.4
SNAPC4-201ENST00000298532 ADAMTS9Q9P2N4 1935 aa12.57□□□□□ -0.4
SNAPC4-201ENST00000298532 ACACBO00763 2458 aa12.57□□□□□ -0.4
SNAPC4-201ENST00000298532 TRBV7-3A0A075B6L6 115 aa12.57□□□□□ -0.4
SNAPC4-201ENST00000298532 MSMPQ1L6U9 139 aa12.57□□□□□ -0.4
SNAPC4-201ENST00000298532 NEXN-AS1Q8NBZ9 246 aa12.57□□□□□ -0.4
SNAPC4-201ENST00000298532 CUL9Q8IWT3 2517 aa12.57□□□□□ -0.4
SNAPC4-201ENST00000298532 IGKV2D-26A0A0A0MRZ7 120 aa12.56□□□□□ -0.4
SNAPC4-201ENST00000298532 APRG1Q8IVJ8 170 aa12.56□□□□□ -0.4
SNAPC4-201ENST00000298532 MDFICQ9P1T7 246 aa12.56□□□□□ -0.4
SNAPC4-201ENST00000298532 A0A0J9YXY3 114 aa12.56□□□□□ -0.4
SNAPC4-201ENST00000298532 BLCAPP62952 87 aa12.56□□□□□ -0.4
SNAPC4-201ENST00000298532 TNCP24821 2201 aa12.56□□□□□ -0.4
SNAPC4-201ENST00000298532 C10orf142B7Z368 130 aa12.55□□□□□ -0.4
SNAPC4-201ENST00000298532 UQCRQO14949 82 aa12.55□□□□□ -0.4
SNAPC4-201ENST00000298532 Q6ZQT7 251 aa12.55□□□□□ -0.4
SNAPC4-201ENST00000298532 Q8N7P7 452 aa12.55□□□□□ -0.4
SNAPC4-201ENST00000298532 TEX49A0A1B0GTD5 131 aa12.55□□□□□ -0.4
SNAPC4-201ENST00000298532 COX7A2LO14548 114 aa12.55□□□□□ -0.4
SNAPC4-201ENST00000298532 NFE4Q86UQ8 179 aa12.55□□□□□ -0.4
SNAPC4-201ENST00000298532 C16orf74Q96GX8 76 aa12.54□□□□□ -0.4
SNAPC4-201ENST00000298532 DEFB1P60022 68 aa12.54□□□□□ -0.4
SNAPC4-201ENST00000298532 C2orf91Q6ZV80 131 aa12.54□□□□□ -0.4
SNAPC4-201ENST00000298532 MIR7-3HGQ8N6C7 128 aa12.54□□□□□ -0.4
SNAPC4-201ENST00000298532 U3KQK5 164 aa12.54□□□□□ -0.4
SNAPC4-201ENST00000298532 DEFB136Q30KP8 78 aa12.53□□□□□ -0.4
SNAPC4-201ENST00000298532 MAPKAPK5-AS1Q8N8E1 139 aa12.53□□□□□ -0.4
SNAPC4-201ENST00000298532 DEFB105AQ8NG35 78 aa12.53□□□□□ -0.4
SNAPC4-201ENST00000298532 ZNF106Q9H2Y7 1883 aaKnown RBP12.53□□□□□ -0.4
SNAPC4-201ENST00000298532 NREPQ16612 68 aa12.53□□□□□ -0.4
SNAPC4-201ENST00000298532 RMI2Q96E14 147 aa12.53□□□□□ -0.4
SNAPC4-201ENST00000298532 A0A0J9YY99 117 aa12.52□□□□□ -0.4
SNAPC4-201ENST00000298532 SLURP1P55000 103 aa12.52□□□□□ -0.4
SNAPC4-201ENST00000298532 GPHB5Q86YW7 130 aa12.52□□□□□ -0.4
SNAPC4-201ENST00000298532 TMEM256-PLSCR3K7ERE1 68 aa12.52□□□□□ -0.4
SNAPC4-201ENST00000298532 MYCNOSP40205 109 aa12.52□□□□□ -0.41
SNAPC4-201ENST00000298532 IGHV4-4A0A075B6R2 117 aa12.51□□□□□ -0.41
SNAPC4-201ENST00000298532 GYPEP15421 78 aa12.51□□□□□ -0.41
SNAPC4-201ENST00000298532 Q9HAA7 133 aa12.51□□□□□ -0.41
SNAPC4-201ENST00000298532 KIAA1549LQ6ZVL6 1849 aa12.51□□□□□ -0.41
SNAPC4-201ENST00000298532 IGHV4-38-2P0DP08 117 aa12.51□□□□□ -0.41
SNAPC4-201ENST00000298532 C1orf229Q6ZS94 237 aaPredicted RBP12.51□□□□□ -0.41
SNAPC4-201ENST00000298532 C14orf132Q9NPU4 83 aa12.51□□□□□ -0.41
SNAPC4-201ENST00000298532 DSCAML1Q8TD84 2053 aa12.5□□□□□ -0.41
SNAPC4-201ENST00000298532 HIST2H2BDQ6DRA6 164 aa12.5□□□□□ -0.41
SNAPC4-201ENST00000298532 CCL24O00175 119 aa12.5□□□□□ -0.41
SNAPC4-201ENST00000298532 A0A0J9YX75 114 aa12.5□□□□□ -0.41
SNAPC4-201ENST00000298532 P0DMU3 169 aa12.5□□□□□ -0.41
SNAPC4-201ENST00000298532 FAM231AP0DMU4 169 aa12.5□□□□□ -0.41
SNAPC4-201ENST00000298532 FAM231CP0DMU5 169 aa12.5□□□□□ -0.41
SNAPC4-201ENST00000298532 CXCL5P42830 114 aa12.49□□□□□ -0.41
SNAPC4-201ENST00000298532 ZMAT4Q9H898 229 aa12.49□□□□□ -0.41
SNAPC4-201ENST00000298532 PDE6GP18545 87 aa12.49□□□□□ -0.41
SNAPC4-201ENST00000298532 C5orf47Q569G3 176 aa12.49□□□□□ -0.41
SNAPC4-201ENST00000298532 UNQ9165/PRO28630Q6UXU0 137 aa12.49□□□□□ -0.41
SNAPC4-201ENST00000298532 CRIP1P50238 77 aa12.49□□□□□ -0.41
SNAPC4-201ENST00000298532 IGLV10-54A0A075B6I4 117 aa12.49□□□□□ -0.41
SNAPC4-201ENST00000298532 CAMK2N2Q96S95 79 aa12.49□□□□□ -0.41
SNAPC4-201ENST00000298532 SPATA25Q9BR10 227 aa12.49□□□□□ -0.41
SNAPC4-201ENST00000298532 ETDCA0A1B0GVM5 59 aa12.48□□□□□ -0.41
SNAPC4-201ENST00000298532 MP68P56378 58 aa12.48□□□□□ -0.41
SNAPC4-201ENST00000298532 C9orf66Q5T8R8 295 aa12.48□□□□□ -0.41
SNAPC4-201ENST00000298532 PLXNB1O43157 2135 aa12.48□□□□□ -0.41
SNAPC4-201ENST00000298532 CEMP1Q6PRD7 247 aaPredicted RBP12.48□□□□□ -0.41
SNAPC4-201ENST00000298532 MED12LQ86YW9 2145 aa12.47□□□□□ -0.41
SNAPC4-201ENST00000298532 TRBV30A0A0K0K1B3 111 aa12.47□□□□□ -0.41
SNAPC4-201ENST00000298532 RNF185Q96GF1 192 aa12.47□□□□□ -0.41
SNAPC4-201ENST00000298532 IGKV2D-24A0A075B6R9 120 aa12.47□□□□□ -0.41
SNAPC4-201ENST00000298532 IGHV4OR15-8A0A075B7B6 117 aa12.47□□□□□ -0.41
SNAPC4-201ENST00000298532 A0A087WW49 117 aa12.47□□□□□ -0.41
SNAPC4-201ENST00000298532 IGHV3-33P01772 117 aa12.46□□□□□ -0.41
SNAPC4-201ENST00000298532 ZNF22P17026 224 aaPredicted RBP12.46□□□□□ -0.41
SNAPC4-201ENST00000298532 CCDC140Q96MF4 163 aa12.46□□□□□ -0.41
SNAPC4-201ENST00000298532 TRBV10-1A0A0K0K1A3 114 aa12.46□□□□□ -0.41
SNAPC4-201ENST00000298532 C3orf22Q8N5N4 141 aa12.46□□□□□ -0.41
SNAPC4-201ENST00000298532 TMEM223A0PJW6 202 aa12.46□□□□□ -0.42
SNAPC4-201ENST00000298532 WFDC9Q8NEX5 89 aa12.46□□□□□ -0.42
SNAPC4-201ENST00000298532 TNRC6BQ9UPQ9 1833 aaKnown RBP12.46□□□□□ -0.42
SNAPC4-201ENST00000298532 IGHV4-28A0A0C4DH34 117 aa12.46□□□□□ -0.42
SNAPC4-201ENST00000298532 TMEM89A2RUT3 159 aa12.46□□□□□ -0.42
SNAPC4-201ENST00000298532 ZFP36P26651 326 aaKnown RBP12.46□□□□□ -0.42
SNAPC4-201ENST00000298532 LINC00310P59036 64 aa12.46□□□□□ -0.42
SNAPC4-201ENST00000298532 ANKHD1Q8IWZ3 2542 aaKnown RBP12.45□□□□□ -0.42
SNAPC4-201ENST00000298532 FSTL3O95633 263 aa12.45□□□□□ -0.42
SNAPC4-201ENST00000298532 UBE2BP63146 152 aa12.45□□□□□ -0.42
SNAPC4-201ENST00000298532 NCR3O14931 201 aa12.45□□□□□ -0.42
SNAPC4-201ENST00000298532 TRIAP1O43715 76 aa12.45□□□□□ -0.42
SNAPC4-201ENST00000298532 CFAP126Q5VTH2 177 aa12.45□□□□□ -0.42
SNAPC4-201ENST00000298532 SIRPDQ9H106 197 aa12.45□□□□□ -0.42
SNAPC4-201ENST00000298532 TRAV23DV6A0A075B6W5 121 aa12.44□□□□□ -0.42
SNAPC4-201ENST00000298532 CACNA1AO00555 2505 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms