RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 MP68P56378 58 aa8.41□□□□□ -1.06
PBRM1-201ENST00000296302 DEFB105AQ8NG35 78 aa8.41□□□□□ -1.06
PBRM1-201ENST00000296302 DYSFO75923 2080 aa8.41□□□□□ -1.06
PBRM1-201ENST00000296302 CCL24O00175 119 aa8.4□□□□□ -1.06
PBRM1-201ENST00000296302 GRNP28799 593 aaKnown RBP8.4□□□□□ -1.06
PBRM1-201ENST00000296302 MYCNOSP40205 109 aa8.4□□□□□ -1.06
PBRM1-201ENST00000296302 SLURP1P55000 103 aa8.4□□□□□ -1.06
PBRM1-201ENST00000296302 HIST2H2BDQ6DRA6 164 aa8.4□□□□□ -1.06
PBRM1-201ENST00000296302 A0A0J9YY99 117 aa8.4□□□□□ -1.06
PBRM1-201ENST00000296302 C2orf91Q6ZV80 131 aa8.4□□□□□ -1.06
PBRM1-201ENST00000296302 ETDCA0A1B0GVM5 59 aa8.4□□□□□ -1.06
PBRM1-201ENST00000296302 DEFB136Q30KP8 78 aa8.4□□□□□ -1.06
PBRM1-201ENST00000296302 A0A0J9YX75 114 aa8.4□□□□□ -1.07
PBRM1-201ENST00000296302 SEM1Q6ZVN7 128 aa8.4□□□□□ -1.07
PBRM1-201ENST00000296302 CAMK2N2Q96S95 79 aa8.4□□□□□ -1.07
PBRM1-201ENST00000296302 IGHV4-38-2P0DP08 117 aa8.39□□□□□ -1.07
PBRM1-201ENST00000296302 MAPKAPK5-AS1Q8N8E1 139 aa8.39□□□□□ -1.07
PBRM1-201ENST00000296302 TRBV10-1A0A0K0K1A3 114 aa8.39□□□□□ -1.07
PBRM1-201ENST00000296302 DEFB121Q5J5C9 76 aa8.39□□□□□ -1.07
PBRM1-201ENST00000296302 IGF2-ASQ6U949 168 aa8.39□□□□□ -1.07
PBRM1-201ENST00000296302 ZNF106Q9H2Y7 1883 aaKnown RBP8.39□□□□□ -1.07
PBRM1-201ENST00000296302 IGHV4-61A0A0C4DH41 118 aa8.39□□□□□ -1.07
PBRM1-201ENST00000296302 SPRY4Q9C004 299 aa8.39□□□□□ -1.07
PBRM1-201ENST00000296302 C14orf132Q9NPU4 83 aa8.39□□□□□ -1.07
PBRM1-201ENST00000296302 IGHV4-4A0A075B6R2 117 aa8.38□□□□□ -1.07
PBRM1-201ENST00000296302 TRBV30A0A0K0K1B3 111 aa8.38□□□□□ -1.07
PBRM1-201ENST00000296302 DEFB1P60022 68 aa8.38□□□□□ -1.07
PBRM1-201ENST00000296302 SPATA25Q9BR10 227 aa8.38□□□□□ -1.07
PBRM1-201ENST00000296302 Q9HAA7 133 aa8.38□□□□□ -1.07
PBRM1-201ENST00000296302 ALPK3Q96L96 1907 aa8.38□□□□□ -1.07
PBRM1-201ENST00000296302 IGKV2D-24A0A075B6R9 120 aa8.38□□□□□ -1.07
PBRM1-201ENST00000296302 C5orf47Q569G3 176 aa8.38□□□□□ -1.07
PBRM1-201ENST00000296302 ODF3Q96PU9 254 aa8.38□□□□□ -1.07
PBRM1-201ENST00000296302 UNQ9165/PRO28630Q6UXU0 137 aa8.37□□□□□ -1.07
PBRM1-201ENST00000296302 ZGRF1Q86YA3 2104 aa8.37□□□□□ -1.07
PBRM1-201ENST00000296302 C3orf22Q8N5N4 141 aa8.37□□□□□ -1.07
PBRM1-201ENST00000296302 IGHV4OR15-8A0A075B7B6 117 aa8.37□□□□□ -1.07
PBRM1-201ENST00000296302 A0A087WW49 117 aa8.37□□□□□ -1.07
PBRM1-201ENST00000296302 TMEM223A0PJW6 202 aa8.37□□□□□ -1.07
PBRM1-201ENST00000296302 C1orf229Q6ZS94 237 aaPredicted RBP8.37□□□□□ -1.07
PBRM1-201ENST00000296302 WFDC9Q8NEX5 89 aa8.37□□□□□ -1.07
PBRM1-201ENST00000296302 IGLV10-54A0A075B6I4 117 aa8.37□□□□□ -1.07
PBRM1-201ENST00000296302 CRIP1P50238 77 aa8.37□□□□□ -1.07
PBRM1-201ENST00000296302 UBE2BP63146 152 aa8.37□□□□□ -1.07
PBRM1-201ENST00000296302 ZNF22P17026 224 aaPredicted RBP8.37□□□□□ -1.07
PBRM1-201ENST00000296302 ATP5EP2Q5VTU8 51 aa8.37□□□□□ -1.07
PBRM1-201ENST00000296302 DIRC1Q969H9 104 aa8.37□□□□□ -1.07
PBRM1-201ENST00000296302 RNF185Q96GF1 192 aa8.37□□□□□ -1.07
PBRM1-201ENST00000296302 SIRPDQ9H106 197 aa8.37□□□□□ -1.07
PBRM1-201ENST00000296302 IGHV3-33P01772 117 aa8.36□□□□□ -1.07
PBRM1-201ENST00000296302 CCDC140Q96MF4 163 aa8.36□□□□□ -1.07
PBRM1-201ENST00000296302 FREM1Q5H8C1 2179 aa8.36□□□□□ -1.07
PBRM1-201ENST00000296302 NDUFA1O15239 70 aa8.36□□□□□ -1.07
PBRM1-201ENST00000296302 NCR3O14931 201 aa8.36□□□□□ -1.07
PBRM1-201ENST00000296302 HIGD2BQ4VC39 106 aa8.36□□□□□ -1.07
PBRM1-201ENST00000296302 ZFP36P26651 326 aaKnown RBP8.35□□□□□ -1.07
PBRM1-201ENST00000296302 CEMP1Q6PRD7 247 aaPredicted RBP8.35□□□□□ -1.07
PBRM1-201ENST00000296302 CFAP126Q5VTH2 177 aa8.35□□□□□ -1.07
PBRM1-201ENST00000296302 IMUPQ9GZP8 106 aa8.35□□□□□ -1.07
PBRM1-201ENST00000296302 TRIAP1O43715 76 aa8.35□□□□□ -1.07
PBRM1-201ENST00000296302 PRB1P04280 392 aa8.35□□□□□ -1.07
PBRM1-201ENST00000296302 IGHV4-28A0A0C4DH34 117 aa8.35□□□□□ -1.07
PBRM1-201ENST00000296302 UPK3BQ9BT76 320 aa8.35□□□□□ -1.07
PBRM1-201ENST00000296302 ODF3BA8MYP8 253 aa8.34□□□□□ -1.07
PBRM1-201ENST00000296302 TRAV23DV6A0A075B6W5 121 aa8.34□□□□□ -1.07
PBRM1-201ENST00000296302 IGLV2-11P01706 119 aa8.34□□□□□ -1.07
PBRM1-201ENST00000296302 HHLA3Q9XRX5 114 aa8.34□□□□□ -1.07
PBRM1-201ENST00000296302 NDUFS5O43920 106 aa8.34□□□□□ -1.07
PBRM1-201ENST00000296302 C10orf105Q8TEF2 133 aa8.34□□□□□ -1.07
PBRM1-201ENST00000296302 IGLV4-3A0A075B6K6 122 aa8.33□□□□□ -1.08
PBRM1-201ENST00000296302 SPAG11BQ08648 103 aa8.33□□□□□ -1.08
PBRM1-201ENST00000296302 TRBV12-3P01733 135 aa8.33□□□□□ -1.08
PBRM1-201ENST00000296302 SPART-AS1P0CW21 52 aa8.33□□□□□ -1.08
PBRM1-201ENST00000296302 LINC00310P59036 64 aa8.33□□□□□ -1.08
PBRM1-201ENST00000296302 C20orf197Q8N268 126 aa8.33□□□□□ -1.08
PBRM1-201ENST00000296302 NDUFB1O75438 58 aa8.33□□□□□ -1.08
PBRM1-201ENST00000296302 RPL18AQ02543 176 aaKnown RBP8.33□□□□□ -1.08
PBRM1-201ENST00000296302 SDIM1Q6ZPB5 146 aa8.33□□□□□ -1.08
PBRM1-201ENST00000296302 TMEM263Q8WUH6 116 aaKnown RBP8.33□□□□□ -1.08
PBRM1-201ENST00000296302 TNRC6BQ9UPQ9 1833 aaKnown RBP8.33□□□□□ -1.08
PBRM1-201ENST00000296302 IGHV4-30-2A0A087WSY4 118 aa8.33□□□□□ -1.08
PBRM1-201ENST00000296302 FAM236DA0A1B0GTK5 79 aa8.32□□□□□ -1.08
PBRM1-201ENST00000296302 FAM236CP0DP71 79 aa8.32□□□□□ -1.08
PBRM1-201ENST00000296302 PKIGQ9Y2B9 76 aa8.32□□□□□ -1.08
PBRM1-201ENST00000296302 IGHV3-30P01768 117 aa8.32□□□□□ -1.08
PBRM1-201ENST00000296302 IGHV3-30-5P0DP03 117 aa8.32□□□□□ -1.08
PBRM1-201ENST00000296302 Q8N976 141 aa8.32□□□□□ -1.08
PBRM1-201ENST00000296302 LINC00308Q8TCZ7 52 aa8.32□□□□□ -1.08
PBRM1-201ENST00000296302 BRK1Q8WUW1 75 aa8.32□□□□□ -1.08
PBRM1-201ENST00000296302 CDKN2A-AS1Q9UH64 79 aa8.32□□□□□ -1.08
PBRM1-201ENST00000296302 MRPS12O15235 138 aaKnown RBP8.32□□□□□ -1.08
PBRM1-201ENST00000296302 A6NDX4 124 aa8.31□□□□□ -1.08
PBRM1-201ENST00000296302 FSTL3O95633 263 aa8.31□□□□□ -1.08
PBRM1-201ENST00000296302 TNCP24821 2201 aa8.31□□□□□ -1.08
PBRM1-201ENST00000296302 FBXL19-AS1Q494R0 122 aa8.31□□□□□ -1.08
PBRM1-201ENST00000296302 COX7BP24311 80 aa8.3□□□□□ -1.08
PBRM1-201ENST00000296302 PCNX2A6NKB5 2137 aa8.3□□□□□ -1.08
PBRM1-201ENST00000296302 TRBV6-5A0A0K0K1A5 114 aa8.3□□□□□ -1.08
PBRM1-201ENST00000296302 TRBV27A0A0K0K1C4 114 aa8.3□□□□□ -1.08
PBRM1-201ENST00000296302 TIMM17BO60830 172 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms