RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 TNXBP22105 4242 aa10.25□□□□□ -0.77
TMEM41A-201ENST00000296254 FXYD6-FXYD2A0A087WZ82 144 aa10.25□□□□□ -0.77
TMEM41A-201ENST00000296254 MT1HL1P0DM35 61 aa10.25□□□□□ -0.77
TMEM41A-201ENST00000296254 RPL19P84098 196 aaKnown RBP10.25□□□□□ -0.77
TMEM41A-201ENST00000296254 C4orf48Q5BLP8 95 aa10.25□□□□□ -0.77
TMEM41A-201ENST00000296254 CLPSL2Q6UWE3 100 aa10.25□□□□□ -0.77
TMEM41A-201ENST00000296254 NTM-AS1Q6ZSK4 140 aa10.25□□□□□ -0.77
TMEM41A-201ENST00000296254 LRP2P98164 4655 aa10.24□□□□□ -0.77
TMEM41A-201ENST00000296254 SNAI2O43623 268 aa10.24□□□□□ -0.77
TMEM41A-201ENST00000296254 RBX1P62877 108 aa10.24□□□□□ -0.77
TMEM41A-201ENST00000296254 TMEM97Q5BJF2 176 aa10.24□□□□□ -0.77
TMEM41A-201ENST00000296254 CST9LP1Q5W188 147 aa10.24□□□□□ -0.77
TMEM41A-201ENST00000296254 ZNF471Q9BX82 626 aaPredicted RBP10.24□□□□□ -0.77
TMEM41A-201ENST00000296254 SDIM1Q6ZPB5 146 aa10.23□□□□□ -0.77
TMEM41A-201ENST00000296254 LINC00269Q8N2A0 174 aa10.23□□□□□ -0.77
TMEM41A-201ENST00000296254 STOML3Q8TAV4 291 aa10.23□□□□□ -0.77
TMEM41A-201ENST00000296254 SSBP4Q9BWG4 385 aaPredicted RBP10.23□□□□□ -0.77
TMEM41A-201ENST00000296254 OR5AL1P0C617 328 aa10.22□□□□□ -0.77
TMEM41A-201ENST00000296254 CIRBPQ14011 172 aaKnown RBP10.22□□□□□ -0.77
TMEM41A-201ENST00000296254 SPANXN1Q5VSR9 72 aa10.22□□□□□ -0.77
TMEM41A-201ENST00000296254 TRBV25-1A0A075B6N4 114 aa10.21□□□□□ -0.77
TMEM41A-201ENST00000296254 MUC21A0A0G2JKD1 596 aa10.21□□□□□ -0.77
TMEM41A-201ENST00000296254 MUC21A0A140T8X8 626 aa10.21□□□□□ -0.77
TMEM41A-201ENST00000296254 CNBPP62633 177 aaKnown RBP10.21□□□□□ -0.77
TMEM41A-201ENST00000296254 GAGE6Q13070 117 aa10.21□□□□□ -0.77
TMEM41A-201ENST00000296254 Q6ZRU5 148 aa10.21□□□□□ -0.77
TMEM41A-201ENST00000296254 CLRN3Q8NCR9 226 aa10.21□□□□□ -0.77
TMEM41A-201ENST00000296254 DERL1Q9BUN8 251 aa10.21□□□□□ -0.77
TMEM41A-201ENST00000296254 MLST8Q9BVC4 326 aa10.21□□□□□ -0.77
TMEM41A-201ENST00000296254 A0A0D9SG52 128 aa10.2□□□□□ -0.78
TMEM41A-201ENST00000296254 F5H697 171 aa10.2□□□□□ -0.78
TMEM41A-201ENST00000296254 PAGE4O60829 102 aa10.2□□□□□ -0.78
TMEM41A-201ENST00000296254 IQCJQ1A5X6 159 aa10.2□□□□□ -0.78
TMEM41A-201ENST00000296254 AP1S3Q96PC3 154 aa10.2□□□□□ -0.78
TMEM41A-201ENST00000296254 KIF25-AS1Q9Y6Z4 181 aa10.2□□□□□ -0.78
TMEM41A-201ENST00000296254 SCO2A0A1W2PP80 73 aa10.19□□□□□ -0.78
TMEM41A-201ENST00000296254 G3V3Q6 166 aa10.19□□□□□ -0.78
TMEM41A-201ENST00000296254 S100A9P06702 114 aaKnown RBP10.19□□□□□ -0.78
TMEM41A-201ENST00000296254 REG3AQ06141 175 aa10.19□□□□□ -0.78
TMEM41A-201ENST00000296254 CYTL1Q9NRR1 136 aa10.19□□□□□ -0.78
TMEM41A-201ENST00000296254 RNF213Q63HN8 5207 aa10.18□□□□□ -0.78
TMEM41A-201ENST00000296254 IGLV10-54A0A075B6I4 117 aa10.18□□□□□ -0.78
TMEM41A-201ENST00000296254 IGHV1-24A0A0C4DH33 117 aa10.18□□□□□ -0.78
TMEM41A-201ENST00000296254 SMIM17P0DL12 118 aa10.18□□□□□ -0.78
TMEM41A-201ENST00000296254 hDV102S1A0JD36 115 aa10.17□□□□□ -0.78
TMEM41A-201ENST00000296254 BAGE2Q86Y30 109 aa10.17□□□□□ -0.78
TMEM41A-201ENST00000296254 IGHV3-64A0A075B6Q5 118 aa10.16□□□□□ -0.78
TMEM41A-201ENST00000296254 M0QY20 66 aa10.16□□□□□ -0.78
TMEM41A-201ENST00000296254 ARPC5O15511 151 aa10.16□□□□□ -0.78
TMEM41A-201ENST00000296254 SSTP61278 116 aa10.16□□□□□ -0.78
TMEM41A-201ENST00000296254 C20orf203Q8NBC4 194 aa10.16□□□□□ -0.78
TMEM41A-201ENST00000296254 SPACA4Q8TDM5 124 aa10.16□□□□□ -0.78
TMEM41A-201ENST00000296254 RNF185Q96GF1 192 aa10.16□□□□□ -0.78
TMEM41A-201ENST00000296254 TRAV8-4A0A0B4J246 113 aa10.15□□□□□ -0.78
TMEM41A-201ENST00000296254 PFDN1O60925 122 aa10.15□□□□□ -0.78
TMEM41A-201ENST00000296254 P01737 135 aa10.15□□□□□ -0.78
TMEM41A-201ENST00000296254 CHTF8P0CG12 524 aa10.15□□□□□ -0.78
TMEM41A-201ENST00000296254 SFT2D1Q8WV19 159 aa10.15□□□□□ -0.78
TMEM41A-201ENST00000296254 A0A087WYN8 130 aa10.14□□□□□ -0.79
TMEM41A-201ENST00000296254 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.14□□□□□ -0.79
TMEM41A-201ENST00000296254 SLPIP03973 132 aa10.14□□□□□ -0.79
TMEM41A-201ENST00000296254 FAM213BQ8TBF2 198 aa10.14□□□□□ -0.79
TMEM41A-201ENST00000296254 MBD3L1Q8WWY6 194 aa10.14□□□□□ -0.79
TMEM41A-201ENST00000296254 GFRA4Q9GZZ7 299 aa10.14□□□□□ -0.79
TMEM41A-201ENST00000296254 AP5S1Q9NUS5 200 aa10.14□□□□□ -0.79
TMEM41A-201ENST00000296254 IGLV4-60A0A075B6I1 120 aa10.13□□□□□ -0.79
TMEM41A-201ENST00000296254 A0A1B0GUV1 79 aa10.13□□□□□ -0.79
TMEM41A-201ENST00000296254 A0A1B0GV50 99 aa10.13□□□□□ -0.79
TMEM41A-201ENST00000296254 H7C1H1 209 aa10.13□□□□□ -0.79
TMEM41A-201ENST00000296254 MGPP08493 103 aa10.13□□□□□ -0.79
TMEM41A-201ENST00000296254 SUMO4Q6EEV6 95 aa10.13□□□□□ -0.79
TMEM41A-201ENST00000296254 TMEM243Q9BU79 118 aa10.13□□□□□ -0.79
TMEM41A-201ENST00000296254 IGLC6P0CF74 106 aa10.12□□□□□ -0.79
TMEM41A-201ENST00000296254 GZMBP10144 247 aa10.12□□□□□ -0.79
TMEM41A-201ENST00000296254 PLAC8Q9NZF1 115 aa10.12□□□□□ -0.79
TMEM41A-201ENST00000296254 UMAD1C9J7I0 102 aa10.11□□□□□ -0.79
TMEM41A-201ENST00000296254 RPL35P42766 123 aaKnown RBP10.11□□□□□ -0.79
TMEM41A-201ENST00000296254 NKX2-5P52952 324 aaPredicted RBP10.11□□□□□ -0.79
TMEM41A-201ENST00000296254 TMUB2Q71RG4 321 aa10.11□□□□□ -0.79
TMEM41A-201ENST00000296254 PGLYRP4Q96LB8 373 aa10.11□□□□□ -0.79
TMEM41A-201ENST00000296254 TPPP3Q9BW30 176 aa10.11□□□□□ -0.79
TMEM41A-201ENST00000296254 PHOX2AO14813 284 aa10.1□□□□□ -0.79
TMEM41A-201ENST00000296254 KCNRGQ8N5I3 272 aa10.1□□□□□ -0.79
TMEM41A-201ENST00000296254 FER1L6-AS1Q8NA97 138 aa10.1□□□□□ -0.79
TMEM41A-201ENST00000296254 DPH3Q96FX2 82 aa10.1□□□□□ -0.79
TMEM41A-201ENST00000296254 RAB5CP51148 216 aa10.09□□□□□ -0.79
TMEM41A-201ENST00000296254 ZNF345Q14585 488 aa10.09□□□□□ -0.79
TMEM41A-201ENST00000296254 WDR73Q6P4I2 378 aa10.09□□□□□ -0.79
TMEM41A-201ENST00000296254 RASL11AQ6T310 242 aa10.09□□□□□ -0.79
TMEM41A-201ENST00000296254 C15orf56Q8N910 161 aa10.09□□□□□ -0.79
TMEM41A-201ENST00000296254 C11orf52Q96A22 123 aa10.09□□□□□ -0.79
TMEM41A-201ENST00000296254 CACNG7P62955 275 aa10.08□□□□□ -0.8
TMEM41A-201ENST00000296254 CENPWQ5EE01 88 aa10.08□□□□□ -0.8
TMEM41A-201ENST00000296254 C7orf33Q8WU49 177 aa10.08□□□□□ -0.8
TMEM41A-201ENST00000296254 SMLR1H3BR10 107 aa10.07□□□□□ -0.8
TMEM41A-201ENST00000296254 H2AFB1P0C5Y9 115 aa10.07□□□□□ -0.8
TMEM41A-201ENST00000296254 SULT1A2P50226 295 aa10.07□□□□□ -0.8
TMEM41A-201ENST00000296254 RPS20P60866 119 aaKnown RBP10.07□□□□□ -0.8
TMEM41A-201ENST00000296254 OR2D3Q8NGH3 330 aa10.07□□□□□ -0.8
TMEM41A-201ENST00000296254 C19orf71A6NCJ1 209 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms