RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 GATA3P23771 443 aa4.59□□□□□ -1.67
VCAM1-201ENST00000294728 ETDBQ3ZM63 59 aa4.59□□□□□ -1.67
VCAM1-201ENST00000294728 SUMO4Q6EEV6 95 aa4.59□□□□□ -1.67
VCAM1-201ENST00000294728 PLEKHB2Q96CS7 222 aa4.59□□□□□ -1.67
VCAM1-201ENST00000294728 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.59□□□□□ -1.67
VCAM1-201ENST00000294728 IGHV3-16A0A0C4DH30 117 aa4.59□□□□□ -1.67
VCAM1-201ENST00000294728 A0A1W2PPR1 153 aa4.59□□□□□ -1.67
VCAM1-201ENST00000294728 CRLF1O75462 422 aa4.59□□□□□ -1.67
VCAM1-201ENST00000294728 DUSP14O95147 198 aaKnown RBP4.59□□□□□ -1.67
VCAM1-201ENST00000294728 FAM159AQ6UWV7 190 aa4.59□□□□□ -1.67
VCAM1-201ENST00000294728 SVIPQ8NHG7 77 aa4.59□□□□□ -1.67
VCAM1-201ENST00000294728 CDIP1Q9H305 208 aa4.59□□□□□ -1.67
VCAM1-201ENST00000294728 TP53TG1Q9Y2A0 90 aa4.59□□□□□ -1.67
VCAM1-201ENST00000294728 MUC4Q99102 2169 aa4.59□□□□□ -1.67
VCAM1-201ENST00000294728 ARHGAP32A7KAX9 2087 aa4.59□□□□□ -1.68
VCAM1-201ENST00000294728 IGHV3-66A0A0C4DH42 116 aa4.59□□□□□ -1.68
VCAM1-201ENST00000294728 M0QY20 66 aa4.59□□□□□ -1.68
VCAM1-201ENST00000294728 ZNF418Q8TF45 676 aaPredicted RBP4.59□□□□□ -1.68
VCAM1-201ENST00000294728 RHPN1-AS1Q9BWJ2 59 aa4.59□□□□□ -1.68
VCAM1-201ENST00000294728 SPANXA1Q9NS26 97 aa4.59□□□□□ -1.68
VCAM1-201ENST00000294728 PRO1854Q9UHT4 67 aa4.59□□□□□ -1.68
VCAM1-201ENST00000294728 NSD1Q96L73 2696 aaPredicted RBP4.59□□□□□ -1.68
VCAM1-201ENST00000294728 IGHV3-35A0A0C4DH35 117 aa4.58□□□□□ -1.68
VCAM1-201ENST00000294728 CFC1BP0CG36 223 aa4.58□□□□□ -1.68
VCAM1-201ENST00000294728 CFC1P0CG37 223 aa4.58□□□□□ -1.68
VCAM1-201ENST00000294728 SCGB2A2Q13296 93 aa4.58□□□□□ -1.68
VCAM1-201ENST00000294728 SCGB1D4Q6XE38 83 aa4.58□□□□□ -1.68
VCAM1-201ENST00000294728 Q6ZQT7 251 aa4.58□□□□□ -1.68
VCAM1-201ENST00000294728 BPESC1Q9GZL8 116 aa4.58□□□□□ -1.68
VCAM1-201ENST00000294728 IGHV3OR16-8A0A075B7F1 116 aa4.58□□□□□ -1.68
VCAM1-201ENST00000294728 INAFM1C9JVW0 142 aa4.58□□□□□ -1.68
VCAM1-201ENST00000294728 J3QQQ9 107 aa4.58□□□□□ -1.68
VCAM1-201ENST00000294728 TIMM17BO60830 172 aa4.58□□□□□ -1.68
VCAM1-201ENST00000294728 RPL13AP40429 203 aaKnown RBP4.58□□□□□ -1.68
VCAM1-201ENST00000294728 SMAGPQ0VAQ4 97 aa4.58□□□□□ -1.68
VCAM1-201ENST00000294728 SRSF9Q13242 221 aaKnown RBP eCLIP4.58□□□□□ -1.68
VCAM1-201ENST00000294728 C20orf203Q8NBC4 194 aa4.58□□□□□ -1.68
VCAM1-201ENST00000294728 A0A0J9YXY3 114 aa4.57□□□□□ -1.68
VCAM1-201ENST00000294728 M0R2P5 195 aa4.57□□□□□ -1.68
VCAM1-201ENST00000294728 GNRH2O43555 120 aa4.57□□□□□ -1.68
VCAM1-201ENST00000294728 PSMB8P28062 276 aa4.57□□□□□ -1.68
VCAM1-201ENST00000294728 KRTAP1-1Q07627 177 aa4.57□□□□□ -1.68
VCAM1-201ENST00000294728 Q6Q795 121 aa4.57□□□□□ -1.68
VCAM1-201ENST00000294728 SH2D6Q7Z4S9 175 aa4.57□□□□□ -1.68
VCAM1-201ENST00000294728 ZNRF2Q8NHG8 242 aa4.57□□□□□ -1.68
VCAM1-201ENST00000294728 PIMREGQ9BSJ6 248 aa4.57□□□□□ -1.68
VCAM1-201ENST00000294728 SPANXDQ9BXN6 97 aa4.57□□□□□ -1.68
VCAM1-201ENST00000294728 SPANXCQ9NY87 97 aa4.57□□□□□ -1.68
VCAM1-201ENST00000294728 FN1P02751 2386 aaKnown RBP4.57□□□□□ -1.68
VCAM1-201ENST00000294728 TRGV11A0A075B6L2 103 aa4.57□□□□□ -1.68
VCAM1-201ENST00000294728 TRBV30A0A0K0K1B3 111 aa4.57□□□□□ -1.68
VCAM1-201ENST00000294728 A8MWV9 139 aa4.57□□□□□ -1.68
VCAM1-201ENST00000294728 I3L3M4 83 aa4.57□□□□□ -1.68
VCAM1-201ENST00000294728 MGPP08493 103 aa4.57□□□□□ -1.68
VCAM1-201ENST00000294728 PRB4P10163 310 aaPredicted RBP4.57□□□□□ -1.68
VCAM1-201ENST00000294728 MRPS36P82909 103 aaKnown RBP4.57□□□□□ -1.68
VCAM1-201ENST00000294728 MRPL23Q16540 153 aaKnown RBP4.57□□□□□ -1.68
VCAM1-201ENST00000294728 C10orf105Q8TEF2 133 aa4.57□□□□□ -1.68
VCAM1-201ENST00000294728 TMEM263Q8WUH6 116 aaKnown RBP4.57□□□□□ -1.68
VCAM1-201ENST00000294728 CLUHP3Q96NS8 147 aa4.57□□□□□ -1.68
VCAM1-201ENST00000294728 HRNRQ86YZ3 2850 aaPredicted RBP4.57□□□□□ -1.68
VCAM1-201ENST00000294728 K7EQG2 157 aa4.57□□□□□ -1.68
VCAM1-201ENST00000294728 TRBV12-3P01733 135 aa4.57□□□□□ -1.68
VCAM1-201ENST00000294728 IGHV3-33P01772 117 aa4.57□□□□□ -1.68
VCAM1-201ENST00000294728 FAM19A3Q7Z5A8 133 aa4.57□□□□□ -1.68
VCAM1-201ENST00000294728 Q96MF0 132 aa4.57□□□□□ -1.68
VCAM1-201ENST00000294728 GTSF1LQ9H1H1 148 aa4.57□□□□□ -1.68
VCAM1-201ENST00000294728 RHODO00212 210 aa4.56□□□□□ -1.68
VCAM1-201ENST00000294728 IGHV4-39P01824 125 aa4.56□□□□□ -1.68
VCAM1-201ENST00000294728 ZNF688P0C7X2 276 aa4.56□□□□□ -1.68
VCAM1-201ENST00000294728 LGALS3P17931 250 aaKnown RBP4.56□□□□□ -1.68
VCAM1-201ENST00000294728 DSCR9P59020 149 aa4.56□□□□□ -1.68
VCAM1-201ENST00000294728 AMTNQ6UX39 209 aa4.56□□□□□ -1.68
VCAM1-201ENST00000294728 SPG11Q96JI7 2443 aa4.56□□□□□ -1.68
VCAM1-201ENST00000294728 ROS1P08922 2347 aa4.56□□□□□ -1.68
VCAM1-201ENST00000294728 FLNAP21333 2647 aaKnown RBP4.56□□□□□ -1.68
VCAM1-201ENST00000294728 IGHV1OR15-1A0A075B7D0 117 aa4.56□□□□□ -1.68
VCAM1-201ENST00000294728 IGHV3OR16-13A0A075B7E8 117 aa4.56□□□□□ -1.68
VCAM1-201ENST00000294728 IGHV3-74A0A0B4J1X5 117 aa4.56□□□□□ -1.68
VCAM1-201ENST00000294728 TCL1BO95988 128 aa4.56□□□□□ -1.68
VCAM1-201ENST00000294728 TSPEAR-AS2P59090 65 aa4.56□□□□□ -1.68
VCAM1-201ENST00000294728 SNRPD3P62318 126 aaKnown RBP4.56□□□□□ -1.68
VCAM1-201ENST00000294728 DEFB121Q5J5C9 76 aa4.56□□□□□ -1.68
VCAM1-201ENST00000294728 Q6ZUT4 128 aa4.56□□□□□ -1.68
VCAM1-201ENST00000294728 DNAJC30Q96LL9 226 aa4.56□□□□□ -1.68
VCAM1-201ENST00000294728 CARD19Q96LW7 228 aa4.56□□□□□ -1.68
VCAM1-201ENST00000294728 FBN1P35555 2871 aaKnown RBP4.55□□□□□ -1.68
VCAM1-201ENST00000294728 IGHV3-49A0A0A0MS15 119 aa4.55□□□□□ -1.68
VCAM1-201ENST00000294728 ZNF22P17026 224 aaPredicted RBP4.55□□□□□ -1.68
VCAM1-201ENST00000294728 SRD5A1P18405 259 aa4.55□□□□□ -1.68
VCAM1-201ENST00000294728 UBTD1Q9HAC8 227 aa4.55□□□□□ -1.68
VCAM1-201ENST00000294728 ANK3Q12955 4377 aaKnown RBP4.55□□□□□ -1.68
VCAM1-201ENST00000294728 J3QLI3 93 aa4.55□□□□□ -1.68
VCAM1-201ENST00000294728 IFITM1P13164 125 aa4.55□□□□□ -1.68
VCAM1-201ENST00000294728 TIMM21Q9BVV7 248 aa4.55□□□□□ -1.68
VCAM1-201ENST00000294728 KLK15Q9H2R5 256 aa4.55□□□□□ -1.68
VCAM1-201ENST00000294728 IGLV4-3A0A075B6K6 122 aa4.54□□□□□ -1.68
VCAM1-201ENST00000294728 IGLV5-45A0A087WSX0 123 aa4.54□□□□□ -1.68
VCAM1-201ENST00000294728 FAM240AA0A1B0GVK7 77 aa4.54□□□□□ -1.68
VCAM1-201ENST00000294728 TINCRA0A1B0GVN0 87 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms