RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 IGHV4OR15-8A0A075B7B6 117 aa10.96□□□□□ -0.65
CCNF-201ENST00000293968 A0A087WW49 117 aa10.96□□□□□ -0.65
CCNF-201ENST00000293968 COL12A1Q99715 3063 aa10.96□□□□□ -0.66
CCNF-201ENST00000293968 IGHV4-61A0A0C4DH41 118 aa10.96□□□□□ -0.66
CCNF-201ENST00000293968 P0DMU3 169 aa10.96□□□□□ -0.66
CCNF-201ENST00000293968 FAM231AP0DMU4 169 aa10.96□□□□□ -0.66
CCNF-201ENST00000293968 FAM231CP0DMU5 169 aa10.96□□□□□ -0.66
CCNF-201ENST00000293968 TRAV8-3A0A0A6YYJ7 113 aa10.95□□□□□ -0.66
CCNF-201ENST00000293968 LEPROTO15243 131 aa10.95□□□□□ -0.66
CCNF-201ENST00000293968 TMEM262E9PQX1 116 aa10.95□□□□□ -0.66
CCNF-201ENST00000293968 KLLNB2CW77 178 aa10.95□□□□□ -0.66
CCNF-201ENST00000293968 TIMM21Q9BVV7 248 aa10.95□□□□□ -0.66
CCNF-201ENST00000293968 RHODO00212 210 aa10.94□□□□□ -0.66
CCNF-201ENST00000293968 IGHV3-33P01772 117 aa10.94□□□□□ -0.66
CCNF-201ENST00000293968 TRBV27A0A0K0K1C4 114 aa10.94□□□□□ -0.66
CCNF-201ENST00000293968 A0A0U1RRA0 63 aa10.94□□□□□ -0.66
CCNF-201ENST00000293968 I3L3M4 83 aa10.94□□□□□ -0.66
CCNF-201ENST00000293968 M0QY20 66 aa10.94□□□□□ -0.66
CCNF-201ENST00000293968 ZNF22P17026 224 aaPredicted RBP10.94□□□□□ -0.66
CCNF-201ENST00000293968 C10orf99Q6UWK7 81 aa10.94□□□□□ -0.66
CCNF-201ENST00000293968 IGHV1OR15-1A0A075B7D0 117 aa10.94□□□□□ -0.66
CCNF-201ENST00000293968 IGHV3-16A0A0C4DH30 117 aa10.94□□□□□ -0.66
CCNF-201ENST00000293968 GATA3P23771 443 aa10.94□□□□□ -0.66
CCNF-201ENST00000293968 GAGE2BQ13066 116 aa10.94□□□□□ -0.66
CCNF-201ENST00000293968 ATXN8Q156A1 80 aa10.94□□□□□ -0.66
CCNF-201ENST00000293968 GAGE2EQ4V326 116 aa10.94□□□□□ -0.66
CCNF-201ENST00000293968 GAGE2DQ9UEU5 116 aa10.94□□□□□ -0.66
CCNF-201ENST00000293968 TMEM223A0PJW6 202 aa10.93□□□□□ -0.66
CCNF-201ENST00000293968 SS18L2Q9UHA2 77 aa10.93□□□□□ -0.66
CCNF-201ENST00000293968 CELSR1Q9NYQ6 3014 aa10.93□□□□□ -0.66
CCNF-201ENST00000293968 SYNJ2BPP57105 145 aa10.93□□□□□ -0.66
CCNF-201ENST00000293968 FAM19A4Q96LR4 140 aa10.93□□□□□ -0.66
CCNF-201ENST00000293968 PIMREGQ9BSJ6 248 aa10.93□□□□□ -0.66
CCNF-201ENST00000293968 A8MZ25 164 aa10.93□□□□□ -0.66
CCNF-201ENST00000293968 IGHG2P01859 326 aa10.93□□□□□ -0.66
CCNF-201ENST00000293968 TTC32Q5I0X7 151 aa10.93□□□□□ -0.66
CCNF-201ENST00000293968 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.92□□□□□ -0.66
CCNF-201ENST00000293968 TEX49A0A1B0GTD5 131 aa10.92□□□□□ -0.66
CCNF-201ENST00000293968 PRM2P04554 102 aa10.92□□□□□ -0.66
CCNF-201ENST00000293968 C20orf203Q8NBC4 194 aa10.92□□□□□ -0.66
CCNF-201ENST00000293968 NACAE9PAV3 2078 aa10.92□□□□□ -0.66
CCNF-201ENST00000293968 ELANEP08246 267 aa10.92□□□□□ -0.66
CCNF-201ENST00000293968 PROK1P58294 105 aa10.92□□□□□ -0.66
CCNF-201ENST00000293968 TNFRSF18Q9Y5U5 241 aa10.92□□□□□ -0.66
CCNF-201ENST00000293968 SPTBN4Q9H254 2564 aa10.92□□□□□ -0.66
CCNF-201ENST00000293968 C2CD3Q4AC94 2353 aa10.92□□□□□ -0.66
CCNF-201ENST00000293968 TRAV8-4A0A0B4J246 113 aa10.91□□□□□ -0.66
CCNF-201ENST00000293968 C19orf84I3L1E1 186 aa10.91□□□□□ -0.66
CCNF-201ENST00000293968 LGALS9O00182 355 aa10.91□□□□□ -0.66
CCNF-201ENST00000293968 C2orf82Q6UX34 121 aa10.91□□□□□ -0.66
CCNF-201ENST00000293968 KLK9Q2XQG4 91 aa10.91□□□□□ -0.66
CCNF-201ENST00000293968 LINC01620Q4KN68 170 aa10.91□□□□□ -0.66
CCNF-201ENST00000293968 NXPH4O95158 308 aa10.91□□□□□ -0.66
CCNF-201ENST00000293968 ATP5J2P56134 94 aa10.91□□□□□ -0.66
CCNF-201ENST00000293968 DAND5Q8N907 189 aa10.91□□□□□ -0.66
CCNF-201ENST00000293968 TMEM263Q8WUH6 116 aaKnown RBP10.91□□□□□ -0.66
CCNF-201ENST00000293968 IGHV3-38A0A0C4DH36 116 aa10.91□□□□□ -0.66
CCNF-201ENST00000293968 B5MCH6 92 aa10.91□□□□□ -0.66
CCNF-201ENST00000293968 IGHV3-30-3P0DP02 117 aa10.91□□□□□ -0.66
CCNF-201ENST00000293968 IGLV4-3A0A075B6K6 122 aa10.9□□□□□ -0.66
CCNF-201ENST00000293968 A0A0J9YXY3 114 aa10.9□□□□□ -0.66
CCNF-201ENST00000293968 RHOHQ15669 191 aa10.9□□□□□ -0.66
CCNF-201ENST00000293968 Q6ZSV7 163 aa10.9□□□□□ -0.66
CCNF-201ENST00000293968 DCANP1Q8TF63 244 aa10.9□□□□□ -0.66
CCNF-201ENST00000293968 M0R2P5 195 aa10.9□□□□□ -0.66
CCNF-201ENST00000293968 C19orf54Q5BKX5 351 aa10.9□□□□□ -0.66
CCNF-201ENST00000293968 AMELXQ99217 191 aa10.9□□□□□ -0.66
CCNF-201ENST00000293968 NDUFA12Q9UI09 145 aa10.9□□□□□ -0.66
CCNF-201ENST00000293968 COX6CP09669 75 aa10.89□□□□□ -0.67
CCNF-201ENST00000293968 NBL1P41271 181 aa10.89□□□□□ -0.67
CCNF-201ENST00000293968 RPL32P62910 135 aaKnown RBP10.89□□□□□ -0.67
CCNF-201ENST00000293968 CCL19Q99731 98 aa10.89□□□□□ -0.67
CCNF-201ENST00000293968 TRBV7-9A0A0J9YWB2 115 aa10.88□□□□□ -0.67
CCNF-201ENST00000293968 A0A0J9YX75 114 aa10.88□□□□□ -0.67
CCNF-201ENST00000293968 TRIAP1O43715 76 aa10.88□□□□□ -0.67
CCNF-201ENST00000293968 APRG1Q8IVJ8 170 aa10.88□□□□□ -0.67
CCNF-201ENST00000293968 CLEC2BQ92478 149 aa10.88□□□□□ -0.67
CCNF-201ENST00000293968 ZNF625Q96I27 306 aaPredicted RBP10.88□□□□□ -0.67
CCNF-201ENST00000293968 DUX3Q96PT4 197 aa10.88□□□□□ -0.67
CCNF-201ENST00000293968 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.88□□□□□ -0.67
CCNF-201ENST00000293968 IGKV2-29A2NJV5 120 aaPredicted RBP10.88□□□□□ -0.67
CCNF-201ENST00000293968 DGAT2L7PQ6IED9 249 aa10.88□□□□□ -0.67
CCNF-201ENST00000293968 USP9YO00507 2555 aaPredicted RBP10.88□□□□□ -0.67
CCNF-201ENST00000293968 TRAV4A0A0B4J268 109 aa10.88□□□□□ -0.67
CCNF-201ENST00000293968 EIF4EBP3O60516 100 aaPredicted RBP10.88□□□□□ -0.67
CCNF-201ENST00000293968 TRBV6-5A0A0K0K1A5 114 aa10.87□□□□□ -0.67
CCNF-201ENST00000293968 NSUN5P1Q3KNT7 163 aa10.87□□□□□ -0.67
CCNF-201ENST00000293968 KHDC1LQ5JSQ8 128 aa10.87□□□□□ -0.67
CCNF-201ENST00000293968 A6NDX4 124 aa10.87□□□□□ -0.67
CCNF-201ENST00000293968 H3BMM0 161 aa10.87□□□□□ -0.67
CCNF-201ENST00000293968 UCNP55089 124 aa10.87□□□□□ -0.67
CCNF-201ENST00000293968 UBE2WQ96B02 151 aa10.87□□□□□ -0.67
CCNF-201ENST00000293968 C9orf85Q96MD7 179 aa10.87□□□□□ -0.67
CCNF-201ENST00000293968 H3BUA1 57 aa10.87□□□□□ -0.67
CCNF-201ENST00000293968 POM121L12Q8N7R1 296 aa10.87□□□□□ -0.67
CCNF-201ENST00000293968 CRLF1O75462 422 aa10.87□□□□□ -0.67
CCNF-201ENST00000293968 A0A0B4J2C4 111 aa10.86□□□□□ -0.67
CCNF-201ENST00000293968 C15orf53Q8NAA6 179 aa10.86□□□□□ -0.67
CCNF-201ENST00000293968 IGHV4-59P01825 116 aa10.86□□□□□ -0.67
CCNF-201ENST00000293968 GNLYP22749 145 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms