RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 NCKAP5O14513 1909 aa12.38□□□□□ -0.43
SSRP1-202ENST00000293880 DEFB135Q30KP9 77 aa12.38□□□□□ -0.43
SSRP1-202ENST00000293880 UQCRQO14949 82 aa12.38□□□□□ -0.43
SSRP1-202ENST00000293880 C9orf66Q5T8R8 295 aa12.38□□□□□ -0.43
SSRP1-202ENST00000293880 DYSFO75923 2080 aa12.38□□□□□ -0.43
SSRP1-202ENST00000293880 A0A096LNI7 61 aa12.37□□□□□ -0.43
SSRP1-202ENST00000293880 C5orf56Q8N8D9 126 aa12.37□□□□□ -0.43
SSRP1-202ENST00000293880 TM2D2Q9BX73 214 aa12.37□□□□□ -0.43
SSRP1-202ENST00000293880 SIRPDQ9H106 197 aa12.37□□□□□ -0.43
SSRP1-202ENST00000293880 TRBV7-3A0A075B6L6 115 aa12.37□□□□□ -0.43
SSRP1-202ENST00000293880 WT1P19544 449 aaPredicted RBP12.37□□□□□ -0.43
SSRP1-202ENST00000293880 WFDC10BQ8IUB3 73 aa12.37□□□□□ -0.43
SSRP1-202ENST00000293880 MUC6Q6W4X9 2439 aa12.37□□□□□ -0.43
SSRP1-202ENST00000293880 NLRC5Q86WI3 1866 aa12.36□□□□□ -0.43
SSRP1-202ENST00000293880 NDUFA1O15239 70 aa12.36□□□□□ -0.43
SSRP1-202ENST00000293880 TIMM17BO60830 172 aa12.36□□□□□ -0.43
SSRP1-202ENST00000293880 HRCT1Q6UXD1 115 aa12.36□□□□□ -0.43
SSRP1-202ENST00000293880 KAAG1Q9UBP8 84 aa12.36□□□□□ -0.43
SSRP1-202ENST00000293880 KLK12Q9UKR0 248 aa12.36□□□□□ -0.43
SSRP1-202ENST00000293880 PKDREJQ9NTG1 2253 aa12.36□□□□□ -0.43
SSRP1-202ENST00000293880 SPART-AS1P0CW21 52 aa12.36□□□□□ -0.43
SSRP1-202ENST00000293880 LINC00643Q86TS7 51 aa12.36□□□□□ -0.43
SSRP1-202ENST00000293880 DIRC1Q969H9 104 aa12.36□□□□□ -0.43
SSRP1-202ENST00000293880 FAM167A-AS1Q96KT0 104 aa12.36□□□□□ -0.43
SSRP1-202ENST00000293880 IGLV2-14P01704 120 aa12.35□□□□□ -0.43
SSRP1-202ENST00000293880 CCL18P55774 89 aa12.35□□□□□ -0.43
SSRP1-202ENST00000293880 E9PLD3 99 aa12.35□□□□□ -0.43
SSRP1-202ENST00000293880 JMJD7-PLA2G4BH0Y9G9 81 aa12.35□□□□□ -0.43
SSRP1-202ENST00000293880 IGKV1-17P01599 117 aa12.34□□□□□ -0.43
SSRP1-202ENST00000293880 ODF1Q14990 250 aa12.34□□□□□ -0.43
SSRP1-202ENST00000293880 ZNF407Q9C0G0 2248 aa12.34□□□□□ -0.43
SSRP1-202ENST00000293880 C2orf70A6NJV1 201 aa12.34□□□□□ -0.43
SSRP1-202ENST00000293880 FANCD2OSQ96PS1 177 aa12.34□□□□□ -0.43
SSRP1-202ENST00000293880 SPAG11BQ08648 103 aa12.34□□□□□ -0.43
SSRP1-202ENST00000293880 Q8N9W7 124 aa12.34□□□□□ -0.43
SSRP1-202ENST00000293880 USP17L23D6RBM5 183 aa12.34□□□□□ -0.43
SSRP1-202ENST00000293880 NDUFA11Q86Y39 141 aa12.34□□□□□ -0.43
SSRP1-202ENST00000293880 BPY2O14599 106 aa12.33□□□□□ -0.44
SSRP1-202ENST00000293880 ZFP36P26651 326 aaKnown RBP12.33□□□□□ -0.44
SSRP1-202ENST00000293880 LINC00694P0DN24 101 aa12.33□□□□□ -0.44
SSRP1-202ENST00000293880 UNQ9165/PRO28630Q6UXU0 137 aa12.33□□□□□ -0.44
SSRP1-202ENST00000293880 RNF138Q8WVD3 245 aa12.33□□□□□ -0.44
SSRP1-202ENST00000293880 TMEM263Q8WUH6 116 aaKnown RBP12.32□□□□□ -0.44
SSRP1-202ENST00000293880 DEFB113Q30KQ7 82 aa12.32□□□□□ -0.44
SSRP1-202ENST00000293880 IGKV2-24A0A0C4DH68 120 aa12.32□□□□□ -0.44
SSRP1-202ENST00000293880 IGHV4-30-4P0DP06 118 aa12.32□□□□□ -0.44
SSRP1-202ENST00000293880 IGHV4-31P0DP07 118 aa12.32□□□□□ -0.44
SSRP1-202ENST00000293880 TMEM256-PLSCR3K7ERE1 68 aa12.31□□□□□ -0.44
SSRP1-202ENST00000293880 ODF3L1Q8IXM7 274 aa12.31□□□□□ -0.44
SSRP1-202ENST00000293880 SPANXB1Q9NS25 103 aaPredicted RBP12.31□□□□□ -0.44
SSRP1-202ENST00000293880 IGHV1-58A0A0C4DH39 117 aa12.31□□□□□ -0.44
SSRP1-202ENST00000293880 KRTAP27-1Q3LI81 207 aa12.31□□□□□ -0.44
SSRP1-202ENST00000293880 PIK3CD-AS1Q5SR53 167 aa12.31□□□□□ -0.44
SSRP1-202ENST00000293880 LENEPQ9Y5L5 61 aa12.31□□□□□ -0.44
SSRP1-202ENST00000293880 H3BT86 120 aa12.31□□□□□ -0.44
SSRP1-202ENST00000293880 TANC1Q9C0D5 1861 aa12.3□□□□□ -0.44
SSRP1-202ENST00000293880 CXCL5P42830 114 aa12.3□□□□□ -0.44
SSRP1-202ENST00000293880 PCNX1Q96RV3 2341 aa12.3□□□□□ -0.44
SSRP1-202ENST00000293880 BDP1A6H8Y1 2624 aa12.29□□□□□ -0.44
SSRP1-202ENST00000293880 HIGD1BQ9P298 99 aa12.29□□□□□ -0.44
SSRP1-202ENST00000293880 K7ERS5 55 aa12.29□□□□□ -0.44
SSRP1-202ENST00000293880 COX7BP24311 80 aa12.29□□□□□ -0.44
SSRP1-202ENST00000293880 NDUFA7O95182 113 aa12.28□□□□□ -0.44
SSRP1-202ENST00000293880 ZNF80P51504 273 aaPredicted RBP12.28□□□□□ -0.44
SSRP1-202ENST00000293880 Q8N7P7 452 aa12.28□□□□□ -0.44
SSRP1-202ENST00000293880 WNK2Q9Y3S1 2297 aa12.28□□□□□ -0.44
SSRP1-202ENST00000293880 POM121L12Q8N7R1 296 aa12.27□□□□□ -0.44
SSRP1-202ENST00000293880 DCANP1Q8TF63 244 aa12.27□□□□□ -0.44
SSRP1-202ENST00000293880 ZFAND3Q9H8U3 227 aa12.27□□□□□ -0.44
SSRP1-202ENST00000293880 GDF5OSQ5U4N7 250 aa12.27□□□□□ -0.45
SSRP1-202ENST00000293880 C4orf3Q8WVX3 66 aa12.27□□□□□ -0.45
SSRP1-202ENST00000293880 NACAE9PAV3 2078 aa12.27□□□□□ -0.45
SSRP1-202ENST00000293880 CTRLP40313 264 aa12.27□□□□□ -0.45
SSRP1-202ENST00000293880 MIAQ16674 131 aa12.27□□□□□ -0.45
SSRP1-202ENST00000293880 SOSTDC1Q6X4U4 206 aa12.27□□□□□ -0.45
SSRP1-202ENST00000293880 C4orf48Q5BLP8 95 aa12.26□□□□□ -0.45
SSRP1-202ENST00000293880 LINC00322Q6ZN03 302 aaPredicted RBP12.26□□□□□ -0.45
SSRP1-202ENST00000293880 LINC00269Q8N2A0 174 aa12.26□□□□□ -0.45
SSRP1-202ENST00000293880 OBSL1O75147 1896 aa12.26□□□□□ -0.45
SSRP1-202ENST00000293880 EML6Q6ZMW3 1958 aa12.26□□□□□ -0.45
SSRP1-202ENST00000293880 NOTCH4Q99466 2003 aa12.25□□□□□ -0.45
SSRP1-202ENST00000293880 A0A0J9YXY3 114 aa12.25□□□□□ -0.45
SSRP1-202ENST00000293880 NANOS2P60321 138 aaKnown RBP12.25□□□□□ -0.45
SSRP1-202ENST00000293880 RBX1P62877 108 aa12.25□□□□□ -0.45
SSRP1-202ENST00000293880 TRBV6-1A0A0K0K1D8 114 aa12.24□□□□□ -0.45
SSRP1-202ENST00000293880 ADORA2A-AS1P86434 159 aa12.24□□□□□ -0.45
SSRP1-202ENST00000293880 PMAIP1Q13794 54 aa12.23□□□□□ -0.45
SSRP1-202ENST00000293880 B9D2Q9BPU9 175 aa12.23□□□□□ -0.45
SSRP1-202ENST00000293880 PRR15LQ9BU68 103 aa12.23□□□□□ -0.45
SSRP1-202ENST00000293880 TRBV27A0A0K0K1C4 114 aa12.23□□□□□ -0.45
SSRP1-202ENST00000293880 LINC00467Q9BRT7 94 aa12.23□□□□□ -0.45
SSRP1-202ENST00000293880 TTC28Q96AY4 2481 aa12.23□□□□□ -0.45
SSRP1-202ENST00000293880 LINC01548A6NM66 108 aa12.22□□□□□ -0.45
SSRP1-202ENST00000293880 HIGD2AQ9BW72 106 aa12.22□□□□□ -0.45
SSRP1-202ENST00000293880 MAP6D1Q9H9H5 199 aa12.22□□□□□ -0.45
SSRP1-202ENST00000293880 C3orf84H3BNL1 204 aa12.22□□□□□ -0.45
SSRP1-202ENST00000293880 IGF1P05019 195 aa12.22□□□□□ -0.45
SSRP1-202ENST00000293880 MRPS12O15235 138 aaKnown RBP12.22□□□□□ -0.45
SSRP1-202ENST00000293880 C20orf173Q96LM9 149 aa12.22□□□□□ -0.45
SSRP1-202ENST00000293880 WISP2O76076 250 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms