RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 IGLV2-8P01709 118 aa16.48■□□□□ 0.23
U2AF1-201ENST00000291552 SCXQ7RTU7 201 aa16.48■□□□□ 0.23
U2AF1-201ENST00000291552 SSTP61278 116 aa16.47■□□□□ 0.23
U2AF1-201ENST00000291552 KCNIP4Q6PIL6 250 aa16.47■□□□□ 0.23
U2AF1-201ENST00000291552 NTM-AS1Q6ZSK4 140 aa16.47■□□□□ 0.23
U2AF1-201ENST00000291552 C15orf54Q8N8G6 183 aa16.47■□□□□ 0.23
U2AF1-201ENST00000291552 GNG13Q9P2W3 67 aa16.47■□□□□ 0.23
U2AF1-201ENST00000291552 TMEM262E9PQX1 116 aa16.46■□□□□ 0.23
U2AF1-201ENST00000291552 GZMBP10144 247 aa16.46■□□□□ 0.23
U2AF1-201ENST00000291552 EIF5AP63241 154 aaKnown RBP16.46■□□□□ 0.23
U2AF1-201ENST00000291552 MANBALQ9NQG1 85 aa16.46■□□□□ 0.23
U2AF1-201ENST00000291552 VAX2Q9UIW0 290 aa16.46■□□□□ 0.23
U2AF1-201ENST00000291552 TRAV1-1A0A0B4J248 108 aa16.45■□□□□ 0.22
U2AF1-201ENST00000291552 Q0VG73 95 aa16.45■□□□□ 0.22
U2AF1-201ENST00000291552 CENPWQ5EE01 88 aa16.45■□□□□ 0.22
U2AF1-201ENST00000291552 F5H697 171 aa16.44■□□□□ 0.22
U2AF1-201ENST00000291552 IGLC6P0CF74 106 aa16.44■□□□□ 0.22
U2AF1-201ENST00000291552 AP1S3Q96PC3 154 aa16.44■□□□□ 0.22
U2AF1-201ENST00000291552 C1orf43Q9BWL3 253 aa16.44■□□□□ 0.22
U2AF1-201ENST00000291552 LRP1Q07954 4544 aaKnown RBP16.44■□□□□ 0.22
U2AF1-201ENST00000291552 CHCHD5Q9BSY4 110 aa16.43■□□□□ 0.22
U2AF1-201ENST00000291552 FAT3Q8TDW7 4589 aa16.43■□□□□ 0.22
U2AF1-201ENST00000291552 C19orf71A6NCJ1 209 aa16.42■□□□□ 0.22
U2AF1-201ENST00000291552 ANGP03950 147 aaKnown RBP16.42■□□□□ 0.22
U2AF1-201ENST00000291552 PLA2G1BP04054 148 aaKnown RBP16.42■□□□□ 0.22
U2AF1-201ENST00000291552 CRPP02741 224 aa16.41■□□□□ 0.22
U2AF1-201ENST00000291552 KRTAP10-4P60372 401 aaPredicted RBP16.41■□□□□ 0.22
U2AF1-201ENST00000291552 CHAC1Q9BUX1 264 aa16.41■□□□□ 0.22
U2AF1-201ENST00000291552 RAB19A4D1S5 217 aa16.4■□□□□ 0.22
U2AF1-201ENST00000291552 TRBV20OR9-2A0A075B6H5 130 aa16.39■□□□□ 0.21
U2AF1-201ENST00000291552 M0QY20 66 aa16.39■□□□□ 0.21
U2AF1-201ENST00000291552 SMIM17P0DL12 118 aa16.39■□□□□ 0.21
U2AF1-201ENST00000291552 FER1L6-AS1Q8NA97 138 aa16.39■□□□□ 0.21
U2AF1-201ENST00000291552 OR2D3Q8NGH3 330 aa16.39■□□□□ 0.21
U2AF1-201ENST00000291552 TPPP3Q9BW30 176 aa16.39■□□□□ 0.21
U2AF1-201ENST00000291552 USP17L23D6RBM5 183 aa16.38■□□□□ 0.21
U2AF1-201ENST00000291552 RAB5CP51148 216 aa16.38■□□□□ 0.21
U2AF1-201ENST00000291552 RBX1P62877 108 aa16.38■□□□□ 0.21
U2AF1-201ENST00000291552 GAGE6Q13070 117 aa16.38■□□□□ 0.21
U2AF1-201ENST00000291552 KRTAP26-1Q6PEX3 210 aa16.38■□□□□ 0.21
U2AF1-201ENST00000291552 PRR34Q9NV39 138 aa16.38■□□□□ 0.21
U2AF1-201ENST00000291552 MGPP08493 103 aa16.37■□□□□ 0.21
U2AF1-201ENST00000291552 SULT1A2P50226 295 aa16.37■□□□□ 0.21
U2AF1-201ENST00000291552 PKIAP61925 76 aa16.37■□□□□ 0.21
U2AF1-201ENST00000291552 C14orf177Q52M58 125 aa16.37■□□□□ 0.21
U2AF1-201ENST00000291552 TMEM97Q5BJF2 176 aa16.37■□□□□ 0.21
U2AF1-201ENST00000291552 SUMO4Q6EEV6 95 aa16.37■□□□□ 0.21
U2AF1-201ENST00000291552 CLPSL2Q6UWE3 100 aa16.37■□□□□ 0.21
U2AF1-201ENST00000291552 CIRBP-AS1Q8TBR5 109 aa16.37■□□□□ 0.21
U2AF1-201ENST00000291552 HLA-DQA1P01909 254 aa16.36■□□□□ 0.21
U2AF1-201ENST00000291552 RPS20P60866 119 aaKnown RBP16.36■□□□□ 0.21
U2AF1-201ENST00000291552 MIAQ16674 131 aa16.36■□□□□ 0.21
U2AF1-201ENST00000291552 IQCJQ1A5X6 159 aa16.36■□□□□ 0.21
U2AF1-201ENST00000291552 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.36■□□□□ 0.21
U2AF1-201ENST00000291552 GNG4P50150 75 aa16.35■□□□□ 0.21
U2AF1-201ENST00000291552 MEF2BQ02080 365 aaPredicted RBP16.35■□□□□ 0.21
U2AF1-201ENST00000291552 TRBV25-1A0A075B6N4 114 aa16.34■□□□□ 0.21
U2AF1-201ENST00000291552 PRSS1P07477 247 aa16.34■□□□□ 0.21
U2AF1-201ENST00000291552 LINC00269Q8N2A0 174 aa16.34■□□□□ 0.21
U2AF1-201ENST00000291552 DAZAP1Q96EP5 407 aaKnown RBP16.34■□□□□ 0.21
U2AF1-201ENST00000291552 SMIM12Q96EX1 92 aa16.34■□□□□ 0.21
U2AF1-201ENST00000291552 CACNG7P62955 275 aa16.33■□□□□ 0.2
U2AF1-201ENST00000291552 IGHV1-24A0A0C4DH33 117 aa16.32■□□□□ 0.2
U2AF1-201ENST00000291552 J3QL48 77 aa16.32■□□□□ 0.2
U2AF1-201ENST00000291552 BCL2P10415 239 aa16.32■□□□□ 0.2
U2AF1-201ENST00000291552 EIF5AL1Q6IS14 154 aaKnown RBP16.32■□□□□ 0.2
U2AF1-201ENST00000291552 KRTAP29-1A8MX34 341 aaPredicted RBP16.31■□□□□ 0.2
U2AF1-201ENST00000291552 PDE6DO43924 150 aa16.31■□□□□ 0.2
U2AF1-201ENST00000291552 P01737 135 aa16.31■□□□□ 0.2
U2AF1-201ENST00000291552 LYZL1Q6UWQ5 148 aa16.31■□□□□ 0.2
U2AF1-201ENST00000291552 TCTE3Q8IZS6 198 aa16.31■□□□□ 0.2
U2AF1-201ENST00000291552 DEFB104AQ8WTQ1 72 aa16.31■□□□□ 0.2
U2AF1-201ENST00000291552 MED9Q9NWA0 146 aa16.31■□□□□ 0.2
U2AF1-201ENST00000291552 TEX46H3BTG2 121 aa16.3■□□□□ 0.2
U2AF1-201ENST00000291552 NKX2-5P52952 324 aaPredicted RBP16.3■□□□□ 0.2
U2AF1-201ENST00000291552 H7C1H1 209 aa16.29■□□□□ 0.2
U2AF1-201ENST00000291552 C20orf203Q8NBC4 194 aa16.29■□□□□ 0.2
U2AF1-201ENST00000291552 GFRA4Q9GZZ7 299 aa16.29■□□□□ 0.2
U2AF1-201ENST00000291552 IFNA1P01562 189 aa16.28■□□□□ 0.2
U2AF1-201ENST00000291552 CTRLP40313 264 aa16.28■□□□□ 0.2
U2AF1-201ENST00000291552 RASL11AQ6T310 242 aa16.28■□□□□ 0.2
U2AF1-201ENST00000291552 F2Z2F3 143 aa16.27■□□□□ 0.2
U2AF1-201ENST00000291552 NUDT10Q8NFP7 164 aa16.27■□□□□ 0.2
U2AF1-201ENST00000291552 NUDT11Q96G61 164 aa16.27■□□□□ 0.2
U2AF1-201ENST00000291552 DPH3P1Q9H4G8 78 aa16.27■□□□□ 0.2
U2AF1-201ENST00000291552 IGLV4-60A0A075B6I1 120 aa16.26■□□□□ 0.19
U2AF1-201ENST00000291552 XKRY2A2RUG3 117 aa16.26■□□□□ 0.19
U2AF1-201ENST00000291552 TRGC1P0CF51 173 aa16.26■□□□□ 0.19
U2AF1-201ENST00000291552 NTF3P20783 257 aa16.26■□□□□ 0.19
U2AF1-201ENST00000291552 REG3AQ06141 175 aa16.26■□□□□ 0.19
U2AF1-201ENST00000291552 SLC51BQ86UW2 128 aa16.26■□□□□ 0.19
U2AF1-201ENST00000291552 HMCN2Q8NDA2 5059 aa16.25■□□□□ 0.19
U2AF1-201ENST00000291552 IGLV10-54A0A075B6I4 117 aa16.25■□□□□ 0.19
U2AF1-201ENST00000291552 K7EN84 100 aa16.25■□□□□ 0.19
U2AF1-201ENST00000291552 C9orf62Q8N4C0 152 aa16.25■□□□□ 0.19
U2AF1-201ENST00000291552 C9orf163Q8N9P6 203 aa16.25■□□□□ 0.19
U2AF1-201ENST00000291552 TMEM243Q9BU79 118 aa16.25■□□□□ 0.19
U2AF1-201ENST00000291552 PANO1I0J062 215 aa16.24■□□□□ 0.19
U2AF1-201ENST00000291552 DGAT2L7PQ6IED9 249 aa16.24■□□□□ 0.19
U2AF1-201ENST00000291552 CNFNQ9BYD5 112 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms