RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 CLEC2BQ92478 149 aa13.41□□□□□ -0.26
PCDHA13-201ENST00000289272 A0A0J9YY99 117 aa13.41□□□□□ -0.26
PCDHA13-201ENST00000289272 NUP210LQ5VU65 1888 aa13.41□□□□□ -0.26
PCDHA13-201ENST00000289272 TMEM61Q8N0U2 210 aa13.41□□□□□ -0.26
PCDHA13-201ENST00000289272 MRPL36Q9P0J6 103 aaKnown RBP13.41□□□□□ -0.26
PCDHA13-201ENST00000289272 IGHV4-59P01825 116 aa13.41□□□□□ -0.26
PCDHA13-201ENST00000289272 E7EUB6 86 aa13.41□□□□□ -0.26
PCDHA13-201ENST00000289272 NDUFA7O95182 113 aa13.41□□□□□ -0.26
PCDHA13-201ENST00000289272 FUSP35637 526 aaKnown RBP eCLIP13.41□□□□□ -0.26
PCDHA13-201ENST00000289272 RPL39P62891 51 aaKnown RBP13.4□□□□□ -0.26
PCDHA13-201ENST00000289272 NXPH4O95158 308 aa13.4□□□□□ -0.26
PCDHA13-201ENST00000289272 SVIPQ8NHG7 77 aa13.4□□□□□ -0.26
PCDHA13-201ENST00000289272 IGHV4-30-2A0A087WSY4 118 aa13.4□□□□□ -0.27
PCDHA13-201ENST00000289272 HIST2H2BCQ6DN03 193 aa13.4□□□□□ -0.27
PCDHA13-201ENST00000289272 HIST2H2BDQ6DRA6 164 aa13.4□□□□□ -0.27
PCDHA13-201ENST00000289272 RMI2Q96E14 147 aa13.4□□□□□ -0.27
PCDHA13-201ENST00000289272 K7EQD1 137 aa13.39□□□□□ -0.27
PCDHA13-201ENST00000289272 TIMM17BO60830 172 aa13.39□□□□□ -0.27
PCDHA13-201ENST00000289272 FAM240AA0A1B0GVK7 77 aa13.39□□□□□ -0.27
PCDHA13-201ENST00000289272 RNASE13Q5GAN3 156 aaKnown RBP13.39□□□□□ -0.27
PCDHA13-201ENST00000289272 F5H768 121 aa13.38□□□□□ -0.27
PCDHA13-201ENST00000289272 PRAC2D3DTV9 90 aa13.38□□□□□ -0.27
PCDHA13-201ENST00000289272 U3KQE9 123 aa13.38□□□□□ -0.27
PCDHA13-201ENST00000289272 TRAV25A0A0B4J276 109 aa13.38□□□□□ -0.27
PCDHA13-201ENST00000289272 FAM236DA0A1B0GTK5 79 aa13.37□□□□□ -0.27
PCDHA13-201ENST00000289272 FAM236CP0DP71 79 aa13.37□□□□□ -0.27
PCDHA13-201ENST00000289272 LINC00310P59036 64 aa13.37□□□□□ -0.27
PCDHA13-201ENST00000289272 C9orf66Q5T8R8 295 aa13.37□□□□□ -0.27
PCDHA13-201ENST00000289272 CCL24O00175 119 aa13.37□□□□□ -0.27
PCDHA13-201ENST00000289272 NDUFC1O43677 76 aa13.37□□□□□ -0.27
PCDHA13-201ENST00000289272 TRAV4A0A0B4J268 109 aa13.37□□□□□ -0.27
PCDHA13-201ENST00000289272 TMEM223A0PJW6 202 aa13.37□□□□□ -0.27
PCDHA13-201ENST00000289272 IGHV3-33P01772 117 aa13.37□□□□□ -0.27
PCDHA13-201ENST00000289272 NFE4Q86UQ8 179 aa13.36□□□□□ -0.27
PCDHA13-201ENST00000289272 NOTCH3Q9UM47 2321 aa13.36□□□□□ -0.27
PCDHA13-201ENST00000289272 PRORYQ9H606 182 aa13.36□□□□□ -0.27
PCDHA13-201ENST00000289272 TEX49A0A1B0GTD5 131 aa13.36□□□□□ -0.27
PCDHA13-201ENST00000289272 MP68P56378 58 aa13.35□□□□□ -0.27
PCDHA13-201ENST00000289272 MED12LQ86YW9 2145 aa13.35□□□□□ -0.27
PCDHA13-201ENST00000289272 IGKV2D-26A0A0A0MRZ7 120 aa13.35□□□□□ -0.27
PCDHA13-201ENST00000289272 Q8N9W7 124 aa13.35□□□□□ -0.27
PCDHA13-201ENST00000289272 Q8NA96 180 aa13.35□□□□□ -0.27
PCDHA13-201ENST00000289272 LECT2O14960 151 aa13.35□□□□□ -0.27
PCDHA13-201ENST00000289272 MUC6Q6W4X9 2439 aa13.35□□□□□ -0.27
PCDHA13-201ENST00000289272 RS1O15537 224 aa13.34□□□□□ -0.27
PCDHA13-201ENST00000289272 FSTL3O95633 263 aa13.34□□□□□ -0.27
PCDHA13-201ENST00000289272 TRBV10-1A0A0K0K1A3 114 aa13.34□□□□□ -0.27
PCDHA13-201ENST00000289272 C16orf74Q96GX8 76 aa13.34□□□□□ -0.27
PCDHA13-201ENST00000289272 Q8N7P7 452 aa13.33□□□□□ -0.27
PCDHA13-201ENST00000289272 MAPKAPK5-AS1Q8N8E1 139 aa13.33□□□□□ -0.27
PCDHA13-201ENST00000289272 RNF185Q96GF1 192 aa13.33□□□□□ -0.27
PCDHA13-201ENST00000289272 TRBV7-3A0A075B6L6 115 aa13.33□□□□□ -0.28
PCDHA13-201ENST00000289272 SERP2Q8N6R1 65 aa13.33□□□□□ -0.28
PCDHA13-201ENST00000289272 ZMAT4Q9H898 229 aa13.33□□□□□ -0.28
PCDHA13-201ENST00000289272 IGHV4-38-2P0DP08 117 aa13.33□□□□□ -0.28
PCDHA13-201ENST00000289272 IGHV3-30P01768 117 aa13.33□□□□□ -0.28
PCDHA13-201ENST00000289272 IGHV3-30-5P0DP03 117 aa13.33□□□□□ -0.28
PCDHA13-201ENST00000289272 PLA2G5P39877 138 aa13.32□□□□□ -0.28
PCDHA13-201ENST00000289272 ZNF80P51504 273 aaPredicted RBP13.32□□□□□ -0.28
PCDHA13-201ENST00000289272 C5orf56Q8N8D9 126 aa13.32□□□□□ -0.28
PCDHA13-201ENST00000289272 A0A0J9YX75 114 aa13.32□□□□□ -0.28
PCDHA13-201ENST00000289272 COX7CP15954 63 aa13.32□□□□□ -0.28
PCDHA13-201ENST00000289272 FAM222AQ5U5X8 452 aa13.32□□□□□ -0.28
PCDHA13-201ENST00000289272 GPHB5Q86YW7 130 aa13.32□□□□□ -0.28
PCDHA13-201ENST00000289272 DAND5Q8N907 189 aa13.32□□□□□ -0.28
PCDHA13-201ENST00000289272 FANCD2OSQ96PS1 177 aa13.32□□□□□ -0.28
PCDHA13-201ENST00000289272 ARHGAP21Q5T5U3 1957 aa13.32□□□□□ -0.28
PCDHA13-201ENST00000289272 NREPQ16612 68 aa13.32□□□□□ -0.28
PCDHA13-201ENST00000289272 NDUFC2-KCTD14E9PQ53 114 aa13.31□□□□□ -0.28
PCDHA13-201ENST00000289272 ARFGEF3Q5TH69 2177 aa13.31□□□□□ -0.28
PCDHA13-201ENST00000289272 XGP55808 180 aa13.31□□□□□ -0.28
PCDHA13-201ENST00000289272 M0QXV9 152 aa13.31□□□□□ -0.28
PCDHA13-201ENST00000289272 ANKHD1Q8IWZ3 2542 aaKnown RBP13.3□□□□□ -0.28
PCDHA13-201ENST00000289272 PYGO1Q9Y3Y4 419 aa13.3□□□□□ -0.28
PCDHA13-201ENST00000289272 PTPRSQ13332 1948 aa13.3□□□□□ -0.28
PCDHA13-201ENST00000289272 TRBV6-5A0A0K0K1A5 114 aa13.3□□□□□ -0.28
PCDHA13-201ENST00000289272 TRIAP1O43715 76 aa13.29□□□□□ -0.28
PCDHA13-201ENST00000289272 IGLV2-11P01706 119 aa13.29□□□□□ -0.28
PCDHA13-201ENST00000289272 C1orf229Q6ZS94 237 aaPredicted RBP13.29□□□□□ -0.28
PCDHA13-201ENST00000289272 IGHV4-4A0A075B6R2 117 aa13.29□□□□□ -0.28
PCDHA13-201ENST00000289272 H7C423 109 aa13.29□□□□□ -0.28
PCDHA13-201ENST00000289272 ZNF22P17026 224 aaPredicted RBP13.29□□□□□ -0.28
PCDHA13-201ENST00000289272 SIRPDQ9H106 197 aa13.29□□□□□ -0.28
PCDHA13-201ENST00000289272 CNFNQ9BYD5 112 aa13.29□□□□□ -0.28
PCDHA13-201ENST00000289272 DYSFO75923 2080 aa13.29□□□□□ -0.28
PCDHA13-201ENST00000289272 NDUFA1O15239 70 aa13.28□□□□□ -0.28
PCDHA13-201ENST00000289272 RPL18AQ02543 176 aaKnown RBP13.28□□□□□ -0.28
PCDHA13-201ENST00000289272 PKIGQ9Y2B9 76 aa13.28□□□□□ -0.28
PCDHA13-201ENST00000289272 TIRAPP58753 221 aa13.28□□□□□ -0.28
PCDHA13-201ENST00000289272 MRPS36P82909 103 aaKnown RBP13.28□□□□□ -0.28
PCDHA13-201ENST00000289272 UPK3BQ9BT76 320 aa13.28□□□□□ -0.28
PCDHA13-201ENST00000289272 PRB1P04280 392 aa13.28□□□□□ -0.28
PCDHA13-201ENST00000289272 BDP1A6H8Y1 2624 aa13.28□□□□□ -0.28
PCDHA13-201ENST00000289272 LST1O00453 97 aa13.27□□□□□ -0.28
PCDHA13-201ENST00000289272 ANGP03950 147 aaKnown RBP13.27□□□□□ -0.28
PCDHA13-201ENST00000289272 CFHR3Q02985 330 aa13.27□□□□□ -0.28
PCDHA13-201ENST00000289272 AJUBAQ96IF1 538 aa13.27□□□□□ -0.29
PCDHA13-201ENST00000289272 MRPS12O15235 138 aaKnown RBP13.27□□□□□ -0.29
PCDHA13-201ENST00000289272 ZFP36P26651 326 aaKnown RBP13.27□□□□□ -0.29
PCDHA13-201ENST00000289272 CRIP1P50238 77 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms