RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 H7C2G1 150 aa8.52□□□□□ -1.05
SCLT1-201ENST00000281142 IGHV3-30P01768 117 aa8.52□□□□□ -1.05
SCLT1-201ENST00000281142 IGHV3-30-5P0DP03 117 aa8.52□□□□□ -1.05
SCLT1-201ENST00000281142 IFITM1P13164 125 aa8.52□□□□□ -1.05
SCLT1-201ENST00000281142 TRPT1Q86TN4 253 aaKnown RBP8.52□□□□□ -1.05
SCLT1-201ENST00000281142 WFDC11Q8NEX6 87 aa8.52□□□□□ -1.05
SCLT1-201ENST00000281142 Q96MF0 132 aa8.52□□□□□ -1.05
SCLT1-201ENST00000281142 A0A096LNT2 108 aa8.51□□□□□ -1.05
SCLT1-201ENST00000281142 TRBV12-3P01733 135 aa8.51□□□□□ -1.05
SCLT1-201ENST00000281142 TMEM170BQ5T4T1 132 aa8.51□□□□□ -1.05
SCLT1-201ENST00000281142 LYRM7Q5U5X0 104 aa8.51□□□□□ -1.05
SCLT1-201ENST00000281142 UNQ9165/PRO28630Q6UXU0 137 aa8.51□□□□□ -1.05
SCLT1-201ENST00000281142 CENPVL3A0A0U1RRI6 287 aa8.51□□□□□ -1.05
SCLT1-201ENST00000281142 SCGB1C2P0DMR2 95 aa8.51□□□□□ -1.05
SCLT1-201ENST00000281142 RNASE3P12724 160 aaKnown RBP8.51□□□□□ -1.05
SCLT1-201ENST00000281142 ASIPP42127 132 aa8.51□□□□□ -1.05
SCLT1-201ENST00000281142 TTC32Q5I0X7 151 aa8.51□□□□□ -1.05
SCLT1-201ENST00000281142 C1orf122Q6ZSJ8 110 aa8.51□□□□□ -1.05
SCLT1-201ENST00000281142 MAPK1IP1LQ8NDC0 245 aa8.51□□□□□ -1.05
SCLT1-201ENST00000281142 ZNRF2Q8NHG8 242 aa8.51□□□□□ -1.05
SCLT1-201ENST00000281142 OPRPNQ99935 248 aaPredicted RBP8.51□□□□□ -1.05
SCLT1-201ENST00000281142 IGHV3-64A0A075B6Q5 118 aa8.5□□□□□ -1.05
SCLT1-201ENST00000281142 A0A087WWL8 130 aa8.5□□□□□ -1.05
SCLT1-201ENST00000281142 TMEM219Q86XT9 240 aa8.5□□□□□ -1.05
SCLT1-201ENST00000281142 U3KQE9 123 aa8.5□□□□□ -1.05
SCLT1-201ENST00000281142 ELANEP08246 267 aa8.5□□□□□ -1.05
SCLT1-201ENST00000281142 MRPL53Q96EL3 112 aaKnown RBP8.5□□□□□ -1.05
SCLT1-201ENST00000281142 TEX15Q9BXT5 2789 aa8.49□□□□□ -1.05
SCLT1-201ENST00000281142 IGIPA6NJ69 53 aa8.49□□□□□ -1.05
SCLT1-201ENST00000281142 SLC25A20O43772 301 aa8.49□□□□□ -1.05
SCLT1-201ENST00000281142 C10orf126Q8N4M7 172 aa8.49□□□□□ -1.05
SCLT1-201ENST00000281142 EEF1AKMT3Q96AZ1 226 aa8.49□□□□□ -1.05
SCLT1-201ENST00000281142 AMELXQ99217 191 aa8.49□□□□□ -1.05
SCLT1-201ENST00000281142 TRAV21A0A0B4J279 112 aa8.49□□□□□ -1.05
SCLT1-201ENST00000281142 C9JAW5 83 aa8.49□□□□□ -1.05
SCLT1-201ENST00000281142 LINC00315P59091 139 aa8.48□□□□□ -1.05
SCLT1-201ENST00000281142 RPL11P62913 178 aaKnown RBP8.48□□□□□ -1.05
SCLT1-201ENST00000281142 ZNF580Q9UK33 172 aa8.48□□□□□ -1.05
SCLT1-201ENST00000281142 NOTCH2Q04721 2471 aa8.48□□□□□ -1.05
SCLT1-201ENST00000281142 MYO9AB2RTY4 2548 aa8.48□□□□□ -1.05
SCLT1-201ENST00000281142 A4D1N5 150 aa8.48□□□□□ -1.05
SCLT1-201ENST00000281142 SAA4P35542 130 aa8.48□□□□□ -1.05
SCLT1-201ENST00000281142 PMVKQ15126 192 aa8.48□□□□□ -1.05
SCLT1-201ENST00000281142 SLC25A29Q8N8R3 303 aa8.48□□□□□ -1.05
SCLT1-201ENST00000281142 PRO1854Q9UHT4 67 aa8.48□□□□□ -1.05
SCLT1-201ENST00000281142 FLNAP21333 2647 aaKnown RBP8.47□□□□□ -1.05
SCLT1-201ENST00000281142 IGHV3OR16-10A0A075B7F0 116 aa8.47□□□□□ -1.05
SCLT1-201ENST00000281142 CYSRT1A8MQ03 144 aa8.47□□□□□ -1.05
SCLT1-201ENST00000281142 SUMO4Q6EEV6 95 aa8.47□□□□□ -1.05
SCLT1-201ENST00000281142 OR10J6PQ8NGY7 276 aa8.47□□□□□ -1.05
SCLT1-201ENST00000281142 ODF3Q96PU9 254 aa8.47□□□□□ -1.05
SCLT1-201ENST00000281142 KIF25-AS1Q9Y6Z4 181 aa8.47□□□□□ -1.05
SCLT1-201ENST00000281142 EDN2P20800 178 aa8.47□□□□□ -1.05
SCLT1-201ENST00000281142 ID1P41134 155 aa8.47□□□□□ -1.05
SCLT1-201ENST00000281142 HERVK_113P61574 105 aa8.47□□□□□ -1.05
SCLT1-201ENST00000281142 MINOS1Q5TGZ0 78 aa8.47□□□□□ -1.05
SCLT1-201ENST00000281142 C9orf139Q6ZV77 190 aa8.47□□□□□ -1.05
SCLT1-201ENST00000281142 SIRPDQ9H106 197 aa8.47□□□□□ -1.05
SCLT1-201ENST00000281142 VPREB3Q9UKI3 123 aa8.47□□□□□ -1.05
SCLT1-201ENST00000281142 MINOS1-NBL1R4GNA1 71 aa8.47□□□□□ -1.05
SCLT1-201ENST00000281142 F5H697 171 aa8.46□□□□□ -1.05
SCLT1-201ENST00000281142 MEIG1Q5JSS6 88 aa8.46□□□□□ -1.05
SCLT1-201ENST00000281142 Q6Q795 121 aa8.46□□□□□ -1.05
SCLT1-201ENST00000281142 C3orf56Q8N813 242 aa8.46□□□□□ -1.05
SCLT1-201ENST00000281142 NTN5Q8WTR8 489 aaPredicted RBP8.46□□□□□ -1.05
SCLT1-201ENST00000281142 ZNF256Q9Y2P7 627 aaPredicted RBP8.46□□□□□ -1.05
SCLT1-201ENST00000281142 TRAV2A0A0B4J234 112 aa8.46□□□□□ -1.06
SCLT1-201ENST00000281142 J3QQQ9 107 aa8.46□□□□□ -1.06
SCLT1-201ENST00000281142 IGHV3-11P01762 117 aa8.46□□□□□ -1.06
SCLT1-201ENST00000281142 Q8N1Y9 231 aa8.46□□□□□ -1.06
SCLT1-201ENST00000281142 LINC00477Q96M19 166 aa8.46□□□□□ -1.06
SCLT1-201ENST00000281142 PPDPFQ9H3Y8 114 aa8.46□□□□□ -1.06
SCLT1-201ENST00000281142 TRBV7-1A0A0A6YYK4 115 aa8.45□□□□□ -1.06
SCLT1-201ENST00000281142 SOCS3O14543 225 aa8.45□□□□□ -1.06
SCLT1-201ENST00000281142 POLR2KP53803 58 aaKnown RBP8.45□□□□□ -1.06
SCLT1-201ENST00000281142 FAM74A4Q5TZK3 123 aa8.45□□□□□ -1.06
SCLT1-201ENST00000281142 OOSP1A8MZH6 123 aa8.45□□□□□ -1.06
SCLT1-201ENST00000281142 SORL1Q92673 2214 aa8.45□□□□□ -1.06
SCLT1-201ENST00000281142 C15orf53Q8NAA6 179 aa8.45□□□□□ -1.06
SCLT1-201ENST00000281142 YAE1D1Q9NRH1 226 aa8.45□□□□□ -1.06
SCLT1-201ENST00000281142 SDHAF1A6NFY7 115 aa8.44□□□□□ -1.06
SCLT1-201ENST00000281142 ADARB2-AS1A8MUL3 147 aa8.44□□□□□ -1.06
SCLT1-201ENST00000281142 IGHV3-33P01772 117 aa8.44□□□□□ -1.06
SCLT1-201ENST00000281142 LENEPQ9Y5L5 61 aa8.44□□□□□ -1.06
SCLT1-201ENST00000281142 TEX49A0A1B0GTD5 131 aa8.44□□□□□ -1.06
SCLT1-201ENST00000281142 LGALS3P17931 250 aaKnown RBP8.44□□□□□ -1.06
SCLT1-201ENST00000281142 ZNF876PQ49A33 203 aa8.44□□□□□ -1.06
SCLT1-201ENST00000281142 MUSTN1Q8IVN3 82 aa8.44□□□□□ -1.06
SCLT1-201ENST00000281142 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.44□□□□□ -1.062e-8■■■■□ 24.1
SCLT1-201ENST00000281142 M0QXV9 152 aa8.43□□□□□ -1.06
SCLT1-201ENST00000281142 MSMBP08118 114 aa8.43□□□□□ -1.06
SCLT1-201ENST00000281142 IGHV4-31P0DP07 118 aa8.43□□□□□ -1.06
SCLT1-201ENST00000281142 TMEM263Q8WUH6 116 aaKnown RBP8.43□□□□□ -1.06
SCLT1-201ENST00000281142 MDFICQ9P1T7 246 aa8.43□□□□□ -1.06
SCLT1-201ENST00000281142 KLK9Q2XQG4 91 aa8.43□□□□□ -1.06
SCLT1-201ENST00000281142 C5orf56Q8N8D9 126 aa8.43□□□□□ -1.06
SCLT1-201ENST00000281142 FAM19A4Q96LR4 140 aa8.43□□□□□ -1.06
SCLT1-201ENST00000281142 KLK9Q9UKQ9 250 aa8.43□□□□□ -1.06
SCLT1-201ENST00000281142 IGHV1-69DA0A0B4J2H0 117 aa8.43□□□□□ -1.06
SCLT1-201ENST00000281142 B4DSR2 109 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms