RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 TRBV27A0A0K0K1C4 114 aa9.61□□□□□ -0.87
C9orf3-201ENST00000277198 LGALS9O00182 355 aa9.61□□□□□ -0.87
C9orf3-201ENST00000277198 LGALS1P09382 135 aaKnown RBP9.61□□□□□ -0.87
C9orf3-201ENST00000277198 SCGB2A2Q13296 93 aa9.61□□□□□ -0.87
C9orf3-201ENST00000277198 ZFP2Q6ZN57 461 aa9.61□□□□□ -0.87
C9orf3-201ENST00000277198 Q6ZS46 218 aa9.61□□□□□ -0.87
C9orf3-201ENST00000277198 PRADC1Q9BSG0 188 aa9.61□□□□□ -0.87
C9orf3-201ENST00000277198 IGKV3-7A0A075B6H7 116 aa9.61□□□□□ -0.87
C9orf3-201ENST00000277198 SPRY2O43597 315 aa9.61□□□□□ -0.87
C9orf3-201ENST00000277198 HERVK_113P61574 105 aa9.61□□□□□ -0.87
C9orf3-201ENST00000277198 SNRPD3P62318 126 aaKnown RBP9.61□□□□□ -0.87
C9orf3-201ENST00000277198 PMVKQ15126 192 aa9.61□□□□□ -0.87
C9orf3-201ENST00000277198 RRN3P1Q2M238 152 aa9.61□□□□□ -0.87
C9orf3-201ENST00000277198 SUMO4Q6EEV6 95 aa9.61□□□□□ -0.87
C9orf3-201ENST00000277198 SYT8Q8NBV8 401 aa9.61□□□□□ -0.87
C9orf3-201ENST00000277198 C9orf85Q96MD7 179 aa9.61□□□□□ -0.87
C9orf3-201ENST00000277198 HOXA3O43365 443 aaPredicted RBP9.6□□□□□ -0.87
C9orf3-201ENST00000277198 CRYGDP07320 174 aa9.6□□□□□ -0.87
C9orf3-201ENST00000277198 RNF152Q8N8N0 203 aa9.6□□□□□ -0.87
C9orf3-201ENST00000277198 FBN3Q75N90 2809 aa9.59□□□□□ -0.87
C9orf3-201ENST00000277198 DUSP14O95147 198 aaKnown RBP9.59□□□□□ -0.87
C9orf3-201ENST00000277198 CD7P09564 240 aa9.59□□□□□ -0.87
C9orf3-201ENST00000277198 LCNL1Q6ZST4 164 aa9.59□□□□□ -0.87
C9orf3-201ENST00000277198 TP53TG1Q9Y2A0 90 aa9.59□□□□□ -0.87
C9orf3-201ENST00000277198 IGHV3-16A0A0C4DH30 117 aa9.59□□□□□ -0.87
C9orf3-201ENST00000277198 ZNF815PA8K554 130 aa9.59□□□□□ -0.87
C9orf3-201ENST00000277198 TSHBP01222 138 aa9.59□□□□□ -0.87
C9orf3-201ENST00000277198 IGLV4-69A0A075B6H9 119 aa9.58□□□□□ -0.88
C9orf3-201ENST00000277198 A0A0J9YX75 114 aa9.58□□□□□ -0.88
C9orf3-201ENST00000277198 SDHAF1A6NFY7 115 aa9.58□□□□□ -0.88
C9orf3-201ENST00000277198 J3QR89 54 aa9.58□□□□□ -0.88
C9orf3-201ENST00000277198 RHOHQ15669 191 aa9.58□□□□□ -0.88
C9orf3-201ENST00000277198 TRAV12-3A0A0B4J271 114 aa9.57□□□□□ -0.88
C9orf3-201ENST00000277198 C11orf86A6NJI1 115 aa9.57□□□□□ -0.88
C9orf3-201ENST00000277198 K7EQG2 157 aa9.57□□□□□ -0.88
C9orf3-201ENST00000277198 F5H697 171 aa9.57□□□□□ -0.88
C9orf3-201ENST00000277198 NSUN5P1Q3KNT7 163 aa9.57□□□□□ -0.88
C9orf3-201ENST00000277198 ZNF876PQ49A33 203 aa9.57□□□□□ -0.88
C9orf3-201ENST00000277198 SCGB1D4Q6XE38 83 aa9.57□□□□□ -0.88
C9orf3-201ENST00000277198 IGHV4-59P01825 116 aa9.56□□□□□ -0.88
C9orf3-201ENST00000277198 UBE2D1P51668 147 aa9.56□□□□□ -0.88
C9orf3-201ENST00000277198 RPL24P83731 157 aaKnown RBP9.56□□□□□ -0.88
C9orf3-201ENST00000277198 SPANXB1Q9NS25 103 aaPredicted RBP9.56□□□□□ -0.88
C9orf3-201ENST00000277198 TRRAPQ9Y4A5 3859 aa9.56□□□□□ -0.88
C9orf3-201ENST00000277198 IGHV1OR15-1A0A075B7D0 117 aa9.55□□□□□ -0.88
C9orf3-201ENST00000277198 TEX48A0A1B0GUV7 120 aa9.55□□□□□ -0.88
C9orf3-201ENST00000277198 M0QY20 66 aa9.55□□□□□ -0.88
C9orf3-201ENST00000277198 RNASE1P07998 156 aaKnown RBP9.55□□□□□ -0.88
C9orf3-201ENST00000277198 Q6YL49 198 aa9.55□□□□□ -0.88
C9orf3-201ENST00000277198 TRPT1Q86TN4 253 aaKnown RBP9.55□□□□□ -0.88
C9orf3-201ENST00000277198 SELENOKQ9Y6D0 94 aa9.55□□□□□ -0.88
C9orf3-201ENST00000277198 A0A087WWL8 130 aa9.55□□□□□ -0.88
C9orf3-201ENST00000277198 ELANEP08246 267 aa9.55□□□□□ -0.88
C9orf3-201ENST00000277198 ZNF688P0C7X2 276 aa9.55□□□□□ -0.88
C9orf3-201ENST00000277198 SRSF9Q13242 221 aaKnown RBP eCLIP9.55□□□□□ -0.88
C9orf3-201ENST00000277198 GAGE13Q4V321 117 aa9.55□□□□□ -0.88
C9orf3-201ENST00000277198 JPT2Q9H910 190 aa9.55□□□□□ -0.88
C9orf3-201ENST00000277198 EDA2RQ9HAV5 297 aa9.55□□□□□ -0.88
C9orf3-201ENST00000277198 ZNF256Q9Y2P7 627 aaPredicted RBP9.55□□□□□ -0.88
C9orf3-201ENST00000277198 NBEAL1Q6ZS30 2694 aa9.54□□□□□ -0.88
C9orf3-201ENST00000277198 EDN2P20800 178 aa9.54□□□□□ -0.88
C9orf3-201ENST00000277198 CD300EQ496F6 205 aaPredicted RBP9.54□□□□□ -0.88
C9orf3-201ENST00000277198 LYRM7Q5U5X0 104 aa9.54□□□□□ -0.88
C9orf3-201ENST00000277198 MORN3Q6PF18 240 aaPredicted RBP9.54□□□□□ -0.88
C9orf3-201ENST00000277198 NFE4Q86UQ8 179 aa9.54□□□□□ -0.88
C9orf3-201ENST00000277198 TRGV11A0A075B6L2 103 aa9.54□□□□□ -0.88
C9orf3-201ENST00000277198 A0A0J9YY99 117 aa9.54□□□□□ -0.88
C9orf3-201ENST00000277198 H3BMG7 143 aa9.54□□□□□ -0.88
C9orf3-201ENST00000277198 Q8N1Y9 231 aa9.54□□□□□ -0.88
C9orf3-201ENST00000277198 MDFICQ9P1T7 246 aa9.53□□□□□ -0.88
C9orf3-201ENST00000277198 MUC4Q99102 2169 aa9.53□□□□□ -0.88
C9orf3-201ENST00000277198 RPL39P62891 51 aaKnown RBP9.52□□□□□ -0.89
C9orf3-201ENST00000277198 WFDC2Q14508 124 aa9.52□□□□□ -0.89
C9orf3-201ENST00000277198 TMEM95Q3KNT9 176 aa9.52□□□□□ -0.89
C9orf3-201ENST00000277198 SLC25A29Q8N8R3 303 aa9.52□□□□□ -0.89
C9orf3-201ENST00000277198 UBE2E2Q96LR5 201 aa9.52□□□□□ -0.89
C9orf3-201ENST00000277198 MRPL16Q9NX20 251 aaKnown RBP9.52□□□□□ -0.89
C9orf3-201ENST00000277198 PGPEP1Q9NXJ5 209 aa9.52□□□□□ -0.89
C9orf3-201ENST00000277198 PRO0461Q9UI25 63 aa9.52□□□□□ -0.89
C9orf3-201ENST00000277198 I3L3M4 83 aa9.52□□□□□ -0.89
C9orf3-201ENST00000277198 ZNF56Q15929 161 aa9.52□□□□□ -0.89
C9orf3-201ENST00000277198 FAM74A4Q5TZK3 123 aa9.52□□□□□ -0.89
C9orf3-201ENST00000277198 PLEKHB2Q96CS7 222 aa9.52□□□□□ -0.89
C9orf3-201ENST00000277198 PIK3CD-AS1Q5SR53 167 aa9.51□□□□□ -0.89
C9orf3-201ENST00000277198 TMEM170BQ5T4T1 132 aa9.51□□□□□ -0.89
C9orf3-201ENST00000277198 C20orf203Q8NBC4 194 aa9.51□□□□□ -0.89
C9orf3-201ENST00000277198 KLHL30-AS1Q8NEE0 82 aa9.51□□□□□ -0.89
C9orf3-201ENST00000277198 DLX4Q92988 240 aaPredicted RBP9.51□□□□□ -0.89
C9orf3-201ENST00000277198 PKD1L1Q8TDX9 2849 aa9.51□□□□□ -0.89
C9orf3-201ENST00000277198 CRYBA4P53673 196 aa9.5□□□□□ -0.89
C9orf3-201ENST00000277198 AMTNQ6UX39 209 aa9.5□□□□□ -0.89
C9orf3-201ENST00000277198 C3orf56Q8N813 242 aa9.5□□□□□ -0.89
C9orf3-201ENST00000277198 ATP6V0E2Q8NHE4 81 aa9.5□□□□□ -0.89
C9orf3-201ENST00000277198 ZNRF2Q8NHG8 242 aa9.5□□□□□ -0.89
C9orf3-201ENST00000277198 WFDC12Q8WWY7 111 aa9.5□□□□□ -0.89
C9orf3-201ENST00000277198 VPREB3Q9UKI3 123 aa9.5□□□□□ -0.89
C9orf3-201ENST00000277198 TRAV12-2A0A075B6T6 113 aa9.5□□□□□ -0.89
C9orf3-201ENST00000277198 J3QQQ9 107 aa9.5□□□□□ -0.89
C9orf3-201ENST00000277198 SCGB1A1P11684 91 aa9.5□□□□□ -0.89
C9orf3-201ENST00000277198 SYNJ2BPP57105 145 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms