RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 RPL39P62891 51 aaKnown RBP9.21□□□□□ -0.94
BEST3-201ENST00000266661 PAPPA-AS1Q5QFB9 102 aa9.21□□□□□ -0.94
BEST3-201ENST00000266661 SPANXB1Q9NS25 103 aaPredicted RBP9.21□□□□□ -0.94
BEST3-201ENST00000266661 ZNF815PA8K554 130 aa9.2□□□□□ -0.94
BEST3-201ENST00000266661 ZNF688P0C7X2 276 aa9.2□□□□□ -0.94
BEST3-201ENST00000266661 DSCR9P59020 149 aa9.2□□□□□ -0.94
BEST3-201ENST00000266661 WFDC2Q14508 124 aa9.2□□□□□ -0.94
BEST3-201ENST00000266661 ZNF876PQ49A33 203 aa9.2□□□□□ -0.94
BEST3-201ENST00000266661 AMTNQ6UX39 209 aa9.2□□□□□ -0.94
BEST3-201ENST00000266661 AMELXQ99217 191 aa9.2□□□□□ -0.94
BEST3-201ENST00000266661 NIPBLQ6KC79 2804 aaeCLIP9.19□□□□□ -0.94
BEST3-201ENST00000266661 MXRA5Q9NR99 2828 aa9.19□□□□□ -0.94
BEST3-201ENST00000266661 Q8N1Y9 231 aa9.19□□□□□ -0.94
BEST3-201ENST00000266661 KLHL30-AS1Q8NEE0 82 aa9.19□□□□□ -0.94
BEST3-201ENST00000266661 ZNRF2Q8NHG8 242 aa9.19□□□□□ -0.94
BEST3-201ENST00000266661 KIR2DL4Q99706 377 aa9.19□□□□□ -0.94
BEST3-201ENST00000266661 ZNF256Q9Y2P7 627 aaPredicted RBP9.19□□□□□ -0.94
BEST3-201ENST00000266661 A0A0J9YY99 117 aa9.19□□□□□ -0.94
BEST3-201ENST00000266661 HOXA3O43365 443 aaPredicted RBP9.19□□□□□ -0.94
BEST3-201ENST00000266661 P0DMU3 169 aa9.19□□□□□ -0.94
BEST3-201ENST00000266661 FAM231AP0DMU4 169 aa9.19□□□□□ -0.94
BEST3-201ENST00000266661 FAM231CP0DMU5 169 aa9.19□□□□□ -0.94
BEST3-201ENST00000266661 TSPEAR-AS2P59090 65 aa9.19□□□□□ -0.94
BEST3-201ENST00000266661 NSUN5P1Q3KNT7 163 aa9.19□□□□□ -0.94
BEST3-201ENST00000266661 CD300EQ496F6 205 aaPredicted RBP9.19□□□□□ -0.94
BEST3-201ENST00000266661 TRAV12-2A0A075B6T6 113 aa9.18□□□□□ -0.94
BEST3-201ENST00000266661 IGHV1OR15-1A0A075B7D0 117 aa9.18□□□□□ -0.94
BEST3-201ENST00000266661 H3BMG7 143 aa9.18□□□□□ -0.94
BEST3-201ENST00000266661 FSHBP01225 129 aa9.18□□□□□ -0.94
BEST3-201ENST00000266661 NFE4Q86UQ8 179 aa9.18□□□□□ -0.94
BEST3-201ENST00000266661 A8MTW9 85 aa9.17□□□□□ -0.94
BEST3-201ENST00000266661 KRTAP1-1Q07627 177 aa9.17□□□□□ -0.94
BEST3-201ENST00000266661 RHOHQ15669 191 aa9.17□□□□□ -0.94
BEST3-201ENST00000266661 LINC01356Q8N9X3 169 aa9.17□□□□□ -0.94
BEST3-201ENST00000266661 F5H697 171 aa9.17□□□□□ -0.94
BEST3-201ENST00000266661 SNRPD3P62318 126 aaKnown RBP9.17□□□□□ -0.94
BEST3-201ENST00000266661 SYT8Q8NBV8 401 aa9.17□□□□□ -0.94
BEST3-201ENST00000266661 DEFB104AQ8WTQ1 72 aa9.17□□□□□ -0.94
BEST3-201ENST00000266661 EDA2RQ9HAV5 297 aa9.17□□□□□ -0.94
BEST3-201ENST00000266661 J3QLI3 93 aa9.16□□□□□ -0.94
BEST3-201ENST00000266661 IGHV4-31P0DP07 118 aa9.16□□□□□ -0.94
BEST3-201ENST00000266661 EMP1P54849 157 aa9.16□□□□□ -0.94
BEST3-201ENST00000266661 HERVK_113P61574 105 aa9.16□□□□□ -0.94
BEST3-201ENST00000266661 RPL24P83731 157 aaKnown RBP9.16□□□□□ -0.94
BEST3-201ENST00000266661 NSD1Q96L73 2696 aaPredicted RBP9.16□□□□□ -0.94
BEST3-201ENST00000266661 LY6G6DO95868 133 aa9.15□□□□□ -0.94
BEST3-201ENST00000266661 ELANEP08246 267 aa9.15□□□□□ -0.94
BEST3-201ENST00000266661 RBMY1A1P0DJD3 496 aaKnown RBP9.15□□□□□ -0.94
BEST3-201ENST00000266661 RBMY1CP0DJD4 496 aa9.15□□□□□ -0.94
BEST3-201ENST00000266661 SYNJ2BPP57105 145 aa9.15□□□□□ -0.94
BEST3-201ENST00000266661 RBMY1FQ15415 496 aaKnown RBP9.15□□□□□ -0.94
BEST3-201ENST00000266661 SPINK13Q1W4C9 94 aa9.15□□□□□ -0.94
BEST3-201ENST00000266661 TRPT1Q86TN4 253 aaKnown RBP9.15□□□□□ -0.94
BEST3-201ENST00000266661 SLC25A29Q8N8R3 303 aa9.15□□□□□ -0.94
BEST3-201ENST00000266661 ZNF702PQ9H963 129 aa9.15□□□□□ -0.94
BEST3-201ENST00000266661 PGPEP1Q9NXJ5 209 aa9.15□□□□□ -0.94
BEST3-201ENST00000266661 SETD2Q9BYW2 2564 aaPredicted RBP9.15□□□□□ -0.94
BEST3-201ENST00000266661 TGFAP01135 160 aa9.15□□□□□ -0.95
BEST3-201ENST00000266661 IGKV3-20P01619 116 aa9.15□□□□□ -0.95
BEST3-201ENST00000266661 IGHV3-30P01768 117 aa9.15□□□□□ -0.95
BEST3-201ENST00000266661 IGHV3-30-5P0DP03 117 aa9.15□□□□□ -0.95
BEST3-201ENST00000266661 UBE2D3P61077 147 aa9.15□□□□□ -0.95
BEST3-201ENST00000266661 UBE2D2P62837 147 aa9.15□□□□□ -0.95
BEST3-201ENST00000266661 GAGE13Q4V321 117 aa9.15□□□□□ -0.95
BEST3-201ENST00000266661 FAM74A4Q5TZK3 123 aa9.15□□□□□ -0.95
BEST3-201ENST00000266661 SCGB1D4Q6XE38 83 aa9.15□□□□□ -0.95
BEST3-201ENST00000266661 C20orf203Q8NBC4 194 aa9.15□□□□□ -0.95
BEST3-201ENST00000266661 FN1P02751 2386 aaKnown RBP9.14□□□□□ -0.95
BEST3-201ENST00000266661 TMEM238LA0A1B0GVL6 79 aa9.14□□□□□ -0.95
BEST3-201ENST00000266661 A6NJY4 79 aa9.14□□□□□ -0.95
BEST3-201ENST00000266661 TSPAN13O95857 204 aa9.14□□□□□ -0.95
BEST3-201ENST00000266661 SH2D6Q7Z4S9 175 aa9.14□□□□□ -0.95
BEST3-201ENST00000266661 FAM104AQ969W3 186 aa9.14□□□□□ -0.95
BEST3-201ENST00000266661 UBE2E2Q96LR5 201 aa9.14□□□□□ -0.95
BEST3-201ENST00000266661 OPRPNQ99935 248 aaPredicted RBP9.14□□□□□ -0.95
BEST3-201ENST00000266661 HIVEP2P31629 2446 aa9.13□□□□□ -0.95
BEST3-201ENST00000266661 TMEM223A0PJW6 202 aa9.13□□□□□ -0.95
BEST3-201ENST00000266661 HOXD3P31249 432 aaPredicted RBP9.13□□□□□ -0.95
BEST3-201ENST00000266661 SMCPP49901 116 aaPredicted RBP9.13□□□□□ -0.95
BEST3-201ENST00000266661 SCGB2A2Q13296 93 aa9.13□□□□□ -0.95
BEST3-201ENST00000266661 ZNF56Q15929 161 aa9.13□□□□□ -0.95
BEST3-201ENST00000266661 Q6YL49 198 aa9.13□□□□□ -0.95
BEST3-201ENST00000266661 NDUFA11Q86Y39 141 aa9.13□□□□□ -0.95
BEST3-201ENST00000266661 SPAG8Q99932 426 aaPredicted RBP9.13□□□□□ -0.95
BEST3-201ENST00000266661 VPREB3Q9UKI3 123 aa9.13□□□□□ -0.95
BEST3-201ENST00000266661 SRSF9Q13242 221 aaKnown RBP eCLIP9.13□□□□□ -0.95
BEST3-201ENST00000266661 ETDBQ3ZM63 59 aa9.13□□□□□ -0.95
BEST3-201ENST00000266661 TRGV11A0A075B6L2 103 aa9.12□□□□□ -0.95
BEST3-201ENST00000266661 I3L3M4 83 aa9.12□□□□□ -0.95
BEST3-201ENST00000266661 J3QQQ9 107 aa9.12□□□□□ -0.95
BEST3-201ENST00000266661 CFC1BP0CG36 223 aa9.12□□□□□ -0.95
BEST3-201ENST00000266661 CFC1P0CG37 223 aa9.12□□□□□ -0.95
BEST3-201ENST00000266661 TMEM170BQ5T4T1 132 aa9.12□□□□□ -0.95
BEST3-201ENST00000266661 CFAP126Q5VTH2 177 aa9.12□□□□□ -0.95
BEST3-201ENST00000266661 IGLV4-3A0A075B6K6 122 aa9.11□□□□□ -0.95
BEST3-201ENST00000266661 LEPROTO15243 131 aa9.11□□□□□ -0.95
BEST3-201ENST00000266661 ZNF22P17026 224 aaPredicted RBP9.11□□□□□ -0.95
BEST3-201ENST00000266661 DLX4Q92988 240 aaPredicted RBP9.11□□□□□ -0.95
BEST3-201ENST00000266661 DUX5Q96PT3 197 aa9.11□□□□□ -0.95
BEST3-201ENST00000266661 YAE1D1Q9NRH1 226 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms