RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 PHLDA1Q8WV24 401 aaPredicted RBP8.82□□□□□ -1
CLSTN3-201ENST00000266546 RNF183Q96D59 192 aa8.82□□□□□ -1
CLSTN3-201ENST00000266546 KLK9Q9UKQ9 250 aa8.82□□□□□ -1
CLSTN3-201ENST00000266546 NDUFA11Q86Y39 141 aa8.81□□□□□ -1
CLSTN3-201ENST00000266546 MGAM2Q2M2H8 2515 aa8.81□□□□□ -1
CLSTN3-201ENST00000266546 KNCNA6PVL3 124 aa8.81□□□□□ -1
CLSTN3-201ENST00000266546 RPL39P62891 51 aaKnown RBP8.81□□□□□ -1
CLSTN3-201ENST00000266546 MUSTN1Q8IVN3 82 aa8.81□□□□□ -1
CLSTN3-201ENST00000266546 NACAE9PAV3 2078 aa8.81□□□□□ -1
CLSTN3-201ENST00000266546 STHQ8IWL8 128 aa8.81□□□□□ -1
CLSTN3-201ENST00000266546 PIFOQ8TCI5 191 aa8.81□□□□□ -1
CLSTN3-201ENST00000266546 USP34Q70CQ2 3546 aa8.81□□□□□ -1
CLSTN3-201ENST00000266546 TRAV12-2A0A075B6T6 113 aa8.8□□□□□ -1
CLSTN3-201ENST00000266546 LEPROTO15243 131 aa8.8□□□□□ -1
CLSTN3-201ENST00000266546 RNF185Q96GF1 192 aa8.8□□□□□ -1
CLSTN3-201ENST00000266546 COL6A3P12111 3177 aa8.8□□□□□ -1
CLSTN3-201ENST00000266546 IGHV1OR15-1A0A075B7D0 117 aa8.8□□□□□ -1
CLSTN3-201ENST00000266546 TRAV13-1A0A0B4J241 112 aa8.8□□□□□ -1
CLSTN3-201ENST00000266546 TCL1BO95988 128 aa8.8□□□□□ -1
CLSTN3-201ENST00000266546 LINC00158P58513 81 aa8.8□□□□□ -1
CLSTN3-201ENST00000266546 C9orf47Q6ZRZ4 202 aa8.8□□□□□ -1
CLSTN3-201ENST00000266546 ZNF415Q09FC8 603 aa8.8□□□□□ -1
CLSTN3-201ENST00000266546 BBC3Q96PG8 261 aaPredicted RBP8.8□□□□□ -1
CLSTN3-201ENST00000266546 RHOHQ15669 191 aa8.8□□□□□ -1
CLSTN3-201ENST00000266546 A0A0J9YXV3 536 aa8.79□□□□□ -1
CLSTN3-201ENST00000266546 INAFM2P0DMQ5 153 aa8.79□□□□□ -1
CLSTN3-201ENST00000266546 IGHV4-38-2P0DP08 117 aa8.79□□□□□ -1
CLSTN3-201ENST00000266546 C5orf56Q8N8D9 126 aa8.79□□□□□ -1
CLSTN3-201ENST00000266546 SPATA25Q9BR10 227 aa8.79□□□□□ -1
CLSTN3-201ENST00000266546 TRGV2A0A075B6R0 118 aa8.79□□□□□ -1
CLSTN3-201ENST00000266546 SUMO4Q6EEV6 95 aa8.79□□□□□ -1
CLSTN3-201ENST00000266546 GATD1Q8NB37 220 aa8.79□□□□□ -1
CLSTN3-201ENST00000266546 TET2Q6N021 2002 aaPredicted RBP8.79□□□□□ -1
CLSTN3-201ENST00000266546 RAI1Q7Z5J4 1906 aaPredicted RBP8.78□□□□□ -1
CLSTN3-201ENST00000266546 RNASE13Q5GAN3 156 aaKnown RBP8.78□□□□□ -1
CLSTN3-201ENST00000266546 IGHG4P01861 327 aa8.78□□□□□ -1
CLSTN3-201ENST00000266546 INSL3P51460 131 aa8.78□□□□□ -1
CLSTN3-201ENST00000266546 EYSQ5T1H1 3165 aa8.78□□□□□ -1
CLSTN3-201ENST00000266546 HIST1H4AP62805 103 aaKnown RBP8.78□□□□□ -1
CLSTN3-201ENST00000266546 RPL36AP83881 106 aaKnown RBP8.78□□□□□ -1
CLSTN3-201ENST00000266546 MRAPQ8TCY5 172 aa8.78□□□□□ -1
CLSTN3-201ENST00000266546 RPL36ALQ969Q0 106 aaKnown RBP8.78□□□□□ -1
CLSTN3-201ENST00000266546 DEFB112Q30KQ8 113 aa8.77□□□□□ -1
CLSTN3-201ENST00000266546 Q8N6K4 173 aa8.77□□□□□ -1
CLSTN3-201ENST00000266546 CLUHP3Q96NS8 147 aa8.77□□□□□ -1
CLSTN3-201ENST00000266546 TIMM17AQ99595 171 aa8.77□□□□□ -1
CLSTN3-201ENST00000266546 VPREB3Q9UKI3 123 aa8.77□□□□□ -1.01
CLSTN3-201ENST00000266546 PAX4O43316 350 aa8.77□□□□□ -1.01
CLSTN3-201ENST00000266546 HHLA3Q9XRX5 114 aa8.77□□□□□ -1.01
CLSTN3-201ENST00000266546 MGAQ8IWI9 3026 aa8.77□□□□□ -1.01
CLSTN3-201ENST00000266546 IGHV7-4-1A0A0J9YVY3 117 aa8.76□□□□□ -1.01
CLSTN3-201ENST00000266546 GAS8-AS1O95177 125 aa8.76□□□□□ -1.01
CLSTN3-201ENST00000266546 NEXN-AS1Q8NBZ9 246 aa8.76□□□□□ -1.01
CLSTN3-201ENST00000266546 A0A096LNJ9 63 aa8.76□□□□□ -1.01
CLSTN3-201ENST00000266546 A6NDX4 124 aa8.76□□□□□ -1.01
CLSTN3-201ENST00000266546 PLA2G2AP14555 144 aa8.76□□□□□ -1.01
CLSTN3-201ENST00000266546 RPL35AP18077 110 aaKnown RBP8.76□□□□□ -1.01
CLSTN3-201ENST00000266546 SYNJ2BPP57105 145 aa8.76□□□□□ -1.01
CLSTN3-201ENST00000266546 C16orf54Q6UWD8 224 aa8.76□□□□□ -1.01
CLSTN3-201ENST00000266546 SPANXDQ9BXN6 97 aa8.76□□□□□ -1.01
CLSTN3-201ENST00000266546 UBE2DNLQ8IWF7 75 aa8.76□□□□□ -1.01
CLSTN3-201ENST00000266546 IGHG2P01859 326 aa8.75□□□□□ -1.01
CLSTN3-201ENST00000266546 DEFB1P60022 68 aa8.75□□□□□ -1.01
CLSTN3-201ENST00000266546 OVOL2Q9BRP0 275 aa8.75□□□□□ -1.01
CLSTN3-201ENST00000266546 SPEGQ15772 3267 aa8.75□□□□□ -1.01
CLSTN3-201ENST00000266546 TRBV10-2A0A0K0K1G8 114 aa8.75□□□□□ -1.01
CLSTN3-201ENST00000266546 TMEM89A2RUT3 159 aa8.75□□□□□ -1.01
CLSTN3-201ENST00000266546 RHODO00212 210 aa8.75□□□□□ -1.01
CLSTN3-201ENST00000266546 ELANEP08246 267 aa8.75□□□□□ -1.01
CLSTN3-201ENST00000266546 ICOSQ9Y6W8 199 aa8.75□□□□□ -1.01
CLSTN3-201ENST00000266546 TRGV1A0A0A0MS02 117 aa8.75□□□□□ -1.01
CLSTN3-201ENST00000266546 CFAP126Q5VTH2 177 aa8.75□□□□□ -1.01
CLSTN3-201ENST00000266546 TMEM86BQ8N661 226 aa8.75□□□□□ -1.01
CLSTN3-201ENST00000266546 IGHV3-38A0A0C4DH36 116 aa8.74□□□□□ -1.01
CLSTN3-201ENST00000266546 DEFB131AP59861 70 aa8.74□□□□□ -1.01
CLSTN3-201ENST00000266546 BLCAPP62952 87 aa8.74□□□□□ -1.01
CLSTN3-201ENST00000266546 AJUBAQ96IF1 538 aa8.74□□□□□ -1.01
CLSTN3-201ENST00000266546 AGRNO00468 2067 aa8.74□□□□□ -1.01
CLSTN3-201ENST00000266546 CHCHD5Q9BSY4 110 aa8.74□□□□□ -1.01
CLSTN3-201ENST00000266546 IGHV3-16A0A0C4DH30 117 aa8.73□□□□□ -1.01
CLSTN3-201ENST00000266546 A0A0J9YY99 117 aa8.73□□□□□ -1.01
CLSTN3-201ENST00000266546 IGHV3-53P01767 116 aa8.73□□□□□ -1.01
CLSTN3-201ENST00000266546 MED14OSP0DP75 135 aa8.73□□□□□ -1.01
CLSTN3-201ENST00000266546 Q8N1Y9 231 aa8.73□□□□□ -1.01
CLSTN3-201ENST00000266546 IGHV4-59P01825 116 aa8.73□□□□□ -1.01
CLSTN3-201ENST00000266546 IGHV4-31P0DP07 118 aa8.73□□□□□ -1.01
CLSTN3-201ENST00000266546 NDUFV3P56181 108 aaKnown RBP8.73□□□□□ -1.01
CLSTN3-201ENST00000266546 TRBV7-3A0A075B6L6 115 aa8.73□□□□□ -1.01
CLSTN3-201ENST00000266546 SLC25A29Q8N8R3 303 aa8.73□□□□□ -1.01
CLSTN3-201ENST00000266546 ACYP1P07311 99 aa8.72□□□□□ -1.01
CLSTN3-201ENST00000266546 H3BT86 120 aa8.72□□□□□ -1.01
CLSTN3-201ENST00000266546 XGP55808 180 aa8.72□□□□□ -1.01
CLSTN3-201ENST00000266546 JPT2Q9H910 190 aa8.72□□□□□ -1.01
CLSTN3-201ENST00000266546 SMAD5-AS1Q9Y6J3 95 aa8.72□□□□□ -1.01
CLSTN3-201ENST00000266546 TRGV4A0A0C4DH28 118 aa8.72□□□□□ -1.01
CLSTN3-201ENST00000266546 NRACQ8N912 160 aa8.72□□□□□ -1.01
CLSTN3-201ENST00000266546 CELSR3Q9NYQ7 3312 aa8.72□□□□□ -1.01
CLSTN3-201ENST00000266546 FAM236AA0A1B0GUQ0 79 aa8.72□□□□□ -1.01
CLSTN3-201ENST00000266546 FAM236BA0A1B0GV22 79 aa8.72□□□□□ -1.01
CLSTN3-201ENST00000266546 IGF1P05019 195 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms