RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 F5H697 171 aa9.86□□□□□ -0.83
SSBP1-201ENST00000265304 CAMPP49913 170 aa9.86□□□□□ -0.83
SSBP1-201ENST00000265304 UBE2D3P61077 147 aa9.86□□□□□ -0.83
SSBP1-201ENST00000265304 UBE2D2P62837 147 aa9.86□□□□□ -0.83
SSBP1-201ENST00000265304 COX19Q49B96 90 aa9.86□□□□□ -0.83
SSBP1-201ENST00000265304 NEGR1Q7Z3B1 354 aa9.86□□□□□ -0.83
SSBP1-201ENST00000265304 AMN1Q8IY45 258 aa9.86□□□□□ -0.83
SSBP1-201ENST00000265304 NEXN-AS1Q8NBZ9 246 aa9.86□□□□□ -0.83
SSBP1-201ENST00000265304 P0DMU3 169 aa9.85□□□□□ -0.83
SSBP1-201ENST00000265304 FAM231AP0DMU4 169 aa9.85□□□□□ -0.83
SSBP1-201ENST00000265304 FAM231CP0DMU5 169 aa9.85□□□□□ -0.83
SSBP1-201ENST00000265304 RPL36AP83881 106 aaKnown RBP9.85□□□□□ -0.83
SSBP1-201ENST00000265304 RPL36ALQ969Q0 106 aaKnown RBP9.85□□□□□ -0.83
SSBP1-201ENST00000265304 GNB1LQ9BYB4 327 aa9.85□□□□□ -0.83
SSBP1-201ENST00000265304 NUDT3O95989 172 aa9.84□□□□□ -0.83
SSBP1-201ENST00000265304 PPBPP02775 128 aa9.84□□□□□ -0.83
SSBP1-201ENST00000265304 MGPP08493 103 aa9.84□□□□□ -0.83
SSBP1-201ENST00000265304 SRIP30626 198 aa9.84□□□□□ -0.83
SSBP1-201ENST00000265304 ESRGQ1W209 222 aa9.84□□□□□ -0.83
SSBP1-201ENST00000265304 MRPL51Q4U2R6 128 aaKnown RBP9.84□□□□□ -0.83
SSBP1-201ENST00000265304 LYPD5Q6UWN5 251 aa9.84□□□□□ -0.83
SSBP1-201ENST00000265304 TMEM136Q6ZRR5 245 aa9.84□□□□□ -0.83
SSBP1-201ENST00000265304 UPK3BQ9BT76 320 aa9.84□□□□□ -0.83
SSBP1-201ENST00000265304 SMCO4Q9NRQ5 59 aa9.84□□□□□ -0.83
SSBP1-201ENST00000265304 URGCP-MRPS24S4R325 110 aa9.84□□□□□ -0.83
SSBP1-201ENST00000265304 DNAH6Q9C0G6 4158 aa9.83□□□□□ -0.84
SSBP1-201ENST00000265304 PPP1R17O96001 155 aa9.83□□□□□ -0.84
SSBP1-201ENST00000265304 NRACQ8N912 160 aa9.83□□□□□ -0.84
SSBP1-201ENST00000265304 ATP6V0E2Q8NHE4 81 aa9.83□□□□□ -0.84
SSBP1-201ENST00000265304 ZNRF2Q8NHG8 242 aa9.83□□□□□ -0.84
SSBP1-201ENST00000265304 GTSF1LQ9H1H1 148 aa9.83□□□□□ -0.84
SSBP1-201ENST00000265304 PHOX2AO14813 284 aa9.82□□□□□ -0.84
SSBP1-201ENST00000265304 GAS8-AS1O95177 125 aa9.82□□□□□ -0.84
SSBP1-201ENST00000265304 S100A1P23297 94 aa9.82□□□□□ -0.84
SSBP1-201ENST00000265304 POLR2KP53803 58 aaKnown RBP9.82□□□□□ -0.84
SSBP1-201ENST00000265304 RPL32P62910 135 aaKnown RBP9.82□□□□□ -0.84
SSBP1-201ENST00000265304 DAZ4Q86SG3 579 aaKnown RBP9.82□□□□□ -0.84
SSBP1-201ENST00000265304 DAZ3Q9NR90 486 aaKnown RBP9.82□□□□□ -0.84
SSBP1-201ENST00000265304 SACSQ9NZJ4 4579 aa9.81□□□□□ -0.84
SSBP1-201ENST00000265304 TRAV26-2A0A0B4J265 109 aa9.81□□□□□ -0.84
SSBP1-201ENST00000265304 GAGE12JA6NER3 117 aa9.81□□□□□ -0.84
SSBP1-201ENST00000265304 PRSS47A8MTI9 375 aa9.81□□□□□ -0.84
SSBP1-201ENST00000265304 HLA-DQA1P01909 254 aa9.81□□□□□ -0.84
SSBP1-201ENST00000265304 MT-ND6P03923 174 aa9.81□□□□□ -0.84
SSBP1-201ENST00000265304 CCL18P55774 89 aa9.81□□□□□ -0.84
SSBP1-201ENST00000265304 GAGE1Q13065 139 aa9.81□□□□□ -0.84
SSBP1-201ENST00000265304 GAGE4Q13068 117 aa9.81□□□□□ -0.84
SSBP1-201ENST00000265304 GAGE5Q13069 117 aa9.81□□□□□ -0.84
SSBP1-201ENST00000265304 GAGE13Q4V321 117 aa9.81□□□□□ -0.84
SSBP1-201ENST00000265304 LINC00476Q8WZB0 136 aa9.81□□□□□ -0.84
SSBP1-201ENST00000265304 MRPS16Q9Y3D3 137 aaKnown RBP9.81□□□□□ -0.84
SSBP1-201ENST00000265304 LINC00588Q9Y4M8 146 aa9.81□□□□□ -0.84
SSBP1-201ENST00000265304 KMT2AQ03164 3969 aa9.8□□□□□ -0.84
SSBP1-201ENST00000265304 RPS10P46783 165 aaKnown RBP9.8□□□□□ -0.84
SSBP1-201ENST00000265304 C20orf78Q9BR46 151 aa9.8□□□□□ -0.84
SSBP1-201ENST00000265304 LAMTOR2Q9Y2Q5 125 aa9.8□□□□□ -0.84
SSBP1-201ENST00000265304 TNFRSF18Q9Y5U5 241 aa9.8□□□□□ -0.84
SSBP1-201ENST00000265304 KMT2CQ8NEZ4 4911 aaKnown RBP9.8□□□□□ -0.84
SSBP1-201ENST00000265304 TGIF2-C20orf24A0A0A6YYL0 155 aa9.79□□□□□ -0.84
SSBP1-201ENST00000265304 TRBV27A0A0K0K1C4 114 aa9.79□□□□□ -0.84
SSBP1-201ENST00000265304 LCE6AA0A183 80 aa9.79□□□□□ -0.84
SSBP1-201ENST00000265304 TMEM97Q5BJF2 176 aa9.79□□□□□ -0.84
SSBP1-201ENST00000265304 LELP1Q5T871 98 aa9.79□□□□□ -0.84
SSBP1-201ENST00000265304 RPL39LQ96EH5 51 aaKnown RBP9.79□□□□□ -0.84
SSBP1-201ENST00000265304 ATP6V1G1O75348 118 aa9.78□□□□□ -0.84
SSBP1-201ENST00000265304 CKS2P33552 79 aa9.78□□□□□ -0.84
SSBP1-201ENST00000265304 CBLN2Q8IUK8 224 aa9.78□□□□□ -0.84
SSBP1-201ENST00000265304 ORMDL3Q8N138 153 aa9.78□□□□□ -0.84
SSBP1-201ENST00000265304 TMEM70Q9BUB7 260 aa9.78□□□□□ -0.84
SSBP1-201ENST00000265304 SDHAF1A6NFY7 115 aa9.77□□□□□ -0.85
SSBP1-201ENST00000265304 COLCA2A8K830 154 aa9.77□□□□□ -0.85
SSBP1-201ENST00000265304 D6R8Y8 96 aa9.77□□□□□ -0.85
SSBP1-201ENST00000265304 OR10J3Q5JRS4 329 aa9.77□□□□□ -0.85
SSBP1-201ENST00000265304 NTM-AS1Q6ZSK4 140 aa9.77□□□□□ -0.85
SSBP1-201ENST00000265304 ST20Q9HBF5 79 aa9.77□□□□□ -0.85
SSBP1-201ENST00000265304 TRBV6-8A0A0A6YYG3 113 aa9.76□□□□□ -0.85
SSBP1-201ENST00000265304 SMKR1H3BMG3 65 aa9.76□□□□□ -0.85
SSBP1-201ENST00000265304 TNFRSF6BO95407 300 aa9.76□□□□□ -0.85
SSBP1-201ENST00000265304 NCR2O95944 276 aa9.76□□□□□ -0.85
SSBP1-201ENST00000265304 SUMO2P61956 95 aaKnown RBP9.76□□□□□ -0.85
SSBP1-201ENST00000265304 IQCJQ1A5X6 159 aa9.76□□□□□ -0.85
SSBP1-201ENST00000265304 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.76□□□□□ -0.85
SSBP1-201ENST00000265304 K7EP13 123 aa9.75□□□□□ -0.85
SSBP1-201ENST00000265304 VCYO14598 125 aa9.75□□□□□ -0.85
SSBP1-201ENST00000265304 APCSP02743 223 aa9.75□□□□□ -0.85
SSBP1-201ENST00000265304 PRELID3AQ96N28 172 aa9.75□□□□□ -0.85
SSBP1-201ENST00000265304 IGLV2-18A0A075B6J9 118 aa9.74□□□□□ -0.85
SSBP1-201ENST00000265304 I3L3M4 83 aa9.74□□□□□ -0.85
SSBP1-201ENST00000265304 NPYP01303 97 aa9.74□□□□□ -0.85
SSBP1-201ENST00000265304 DNAH10OSP0CZ25 163 aa9.74□□□□□ -0.85
SSBP1-201ENST00000265304 ALKBH7Q9BT30 221 aaPredicted RBP9.73□□□□□ -0.85
SSBP1-201ENST00000265304 MRPL18Q9H0U6 180 aaKnown RBP9.73□□□□□ -0.85
SSBP1-201ENST00000265304 Q9H8V8 135 aa9.73□□□□□ -0.85
SSBP1-201ENST00000265304 TRAV8-6A0A0B4J262 113 aa9.72□□□□□ -0.85
SSBP1-201ENST00000265304 TSHBP01222 138 aa9.72□□□□□ -0.85
SSBP1-201ENST00000265304 ESDP10768 282 aa9.72□□□□□ -0.85
SSBP1-201ENST00000265304 LINC01556Q5JQF7 62 aa9.72□□□□□ -0.85
SSBP1-201ENST00000265304 Q6ZR54 194 aa9.72□□□□□ -0.85
SSBP1-201ENST00000265304 CHCHD7Q9BUK0 85 aa9.72□□□□□ -0.85
SSBP1-201ENST00000265304 SMIM2Q9BVW6 85 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms