RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 GPHB5Q86YW7 130 aa9.86□□□□□ -0.83
NUP54-201ENST00000264883 ZNF843Q8N446 348 aa9.86□□□□□ -0.83
NUP54-201ENST00000264883 DEFB104AQ8WTQ1 72 aa9.86□□□□□ -0.83
NUP54-201ENST00000264883 PHLDA3Q9Y5J5 127 aa9.86□□□□□ -0.83
NUP54-201ENST00000264883 CLPSL1A2RUU4 121 aa9.85□□□□□ -0.83
NUP54-201ENST00000264883 UQCRQO14949 82 aa9.85□□□□□ -0.83
NUP54-201ENST00000264883 ZNF22P17026 224 aaPredicted RBP9.85□□□□□ -0.83
NUP54-201ENST00000264883 S100A4P26447 101 aaKnown RBP9.85□□□□□ -0.83
NUP54-201ENST00000264883 CEMP1Q6PRD7 247 aaPredicted RBP9.85□□□□□ -0.83
NUP54-201ENST00000264883 C9orf139Q6ZV77 190 aa9.85□□□□□ -0.83
NUP54-201ENST00000264883 ICOSQ9Y6W8 199 aa9.85□□□□□ -0.83
NUP54-201ENST00000264883 U3KQE9 123 aa9.85□□□□□ -0.83
NUP54-201ENST00000264883 TMEM223A0PJW6 202 aa9.85□□□□□ -0.83
NUP54-201ENST00000264883 PRR9Q5T870 116 aa9.85□□□□□ -0.83
NUP54-201ENST00000264883 TIMM17AQ99595 171 aa9.85□□□□□ -0.83
NUP54-201ENST00000264883 COX6CP09669 75 aa9.84□□□□□ -0.83
NUP54-201ENST00000264883 FAM19A5Q7Z5A7 132 aaPredicted RBP9.84□□□□□ -0.83
NUP54-201ENST00000264883 LRBAP50851 2863 aa9.84□□□□□ -0.83
NUP54-201ENST00000264883 PRB1P04280 392 aa9.83□□□□□ -0.84
NUP54-201ENST00000264883 UBE2E1P51965 193 aa9.83□□□□□ -0.84
NUP54-201ENST00000264883 LINC00526Q96FQ7 95 aa9.83□□□□□ -0.84
NUP54-201ENST00000264883 LINC00477Q96M19 166 aa9.83□□□□□ -0.84
NUP54-201ENST00000264883 SPANXDQ9BXN6 97 aa9.83□□□□□ -0.84
NUP54-201ENST00000264883 EPG5Q9HCE0 2579 aa9.83□□□□□ -0.84
NUP54-201ENST00000264883 IGHV3-64A0A075B6Q5 118 aa9.83□□□□□ -0.84
NUP54-201ENST00000264883 FLNCQ14315 2725 aa9.83□□□□□ -0.84
NUP54-201ENST00000264883 A0A1B0GX51 115 aa9.82□□□□□ -0.84
NUP54-201ENST00000264883 CLEC2BQ92478 149 aa9.82□□□□□ -0.84
NUP54-201ENST00000264883 CCDC140Q96MF4 163 aa9.82□□□□□ -0.84
NUP54-201ENST00000264883 KLK5Q9Y337 293 aaPredicted RBP9.82□□□□□ -0.84
NUP54-201ENST00000264883 IGHV3OR16-13A0A075B7E8 117 aa9.82□□□□□ -0.84
NUP54-201ENST00000264883 IGHV3-74A0A0B4J1X5 117 aa9.82□□□□□ -0.84
NUP54-201ENST00000264883 TRAV21A0A0B4J279 112 aa9.82□□□□□ -0.84
NUP54-201ENST00000264883 ECSCRQ19T08 205 aa9.82□□□□□ -0.84
NUP54-201ENST00000264883 ACYP1P07311 99 aa9.81□□□□□ -0.84
NUP54-201ENST00000264883 CLEC19AQ6UXS0 136 aa9.81□□□□□ -0.84
NUP54-201ENST00000264883 LINC00527Q9UJ94 153 aa9.81□□□□□ -0.84
NUP54-201ENST00000264883 ZNF256Q9Y2P7 627 aaPredicted RBP9.81□□□□□ -0.84
NUP54-201ENST00000264883 DCHS2Q6V1P9 2916 aa9.81□□□□□ -0.84
NUP54-201ENST00000264883 A0A0J9YXY3 114 aa9.81□□□□□ -0.84
NUP54-201ENST00000264883 SDHAF1A6NFY7 115 aa9.81□□□□□ -0.84
NUP54-201ENST00000264883 OVOL1O14753 267 aa9.81□□□□□ -0.84
NUP54-201ENST00000264883 ATP6V0E1O15342 81 aa9.81□□□□□ -0.84
NUP54-201ENST00000264883 C16orf92Q96LL3 132 aa9.81□□□□□ -0.84
NUP54-201ENST00000264883 SIRPDQ9H106 197 aa9.81□□□□□ -0.84
NUP54-201ENST00000264883 UBTD1Q9HAC8 227 aa9.81□□□□□ -0.84
NUP54-201ENST00000264883 A0A0J9YX75 114 aa9.8□□□□□ -0.84
NUP54-201ENST00000264883 LST1O00453 97 aa9.8□□□□□ -0.84
NUP54-201ENST00000264883 VCYO14598 125 aa9.8□□□□□ -0.84
NUP54-201ENST00000264883 IGF1P05019 195 aa9.8□□□□□ -0.84
NUP54-201ENST00000264883 C11orf71Q6IPW1 123 aa9.8□□□□□ -0.84
NUP54-201ENST00000264883 POLR2KP53803 58 aaKnown RBP9.8□□□□□ -0.84
NUP54-201ENST00000264883 DOPEY1Q5JWR5 2465 aa9.79□□□□□ -0.84
NUP54-201ENST00000264883 USP9XQ93008 2570 aaPredicted RBP9.79□□□□□ -0.84
NUP54-201ENST00000264883 FAM223BA6NKX1 122 aa9.79□□□□□ -0.84
NUP54-201ENST00000264883 WIPF1O43516 503 aa9.79□□□□□ -0.84
NUP54-201ENST00000264883 PRSS2P07478 247 aa9.79□□□□□ -0.84
NUP54-201ENST00000264883 FAM223AQ8IWN6 122 aa9.79□□□□□ -0.84
NUP54-201ENST00000264883 IGHV3-49A0A0A0MS15 119 aa9.79□□□□□ -0.84
NUP54-201ENST00000264883 A0A1W2PPR1 153 aa9.79□□□□□ -0.84
NUP54-201ENST00000264883 C19orf84I3L1E1 186 aa9.79□□□□□ -0.84
NUP54-201ENST00000264883 ATP5G1P05496 136 aa9.79□□□□□ -0.84
NUP54-201ENST00000264883 IGHV4OR15-8A0A075B7B6 117 aa9.78□□□□□ -0.84
NUP54-201ENST00000264883 A0A087WW49 117 aa9.78□□□□□ -0.84
NUP54-201ENST00000264883 LINC00643Q86TS7 51 aa9.78□□□□□ -0.84
NUP54-201ENST00000264883 OR13C6PQ8NH95 151 aa9.78□□□□□ -0.84
NUP54-201ENST00000264883 EDA2RQ9HAV5 297 aa9.78□□□□□ -0.84
NUP54-201ENST00000264883 KMT2BQ9UMN6 2715 aaPredicted RBP9.78□□□□□ -0.84
NUP54-201ENST00000264883 MYO18BQ8IUG5 2567 aa9.78□□□□□ -0.84
NUP54-201ENST00000264883 TRAV8-3A0A0A6YYJ7 113 aa9.78□□□□□ -0.84
NUP54-201ENST00000264883 TRAV25A0A0B4J276 109 aa9.78□□□□□ -0.84
NUP54-201ENST00000264883 SMCR5Q8TEV8 140 aa9.78□□□□□ -0.84
NUP54-201ENST00000264883 OPRPNQ99935 248 aaPredicted RBP9.78□□□□□ -0.84
NUP54-201ENST00000264883 RPS28P62857 69 aaKnown RBP9.77□□□□□ -0.85
NUP54-201ENST00000264883 GAGE2AQ6NT46 116 aa9.77□□□□□ -0.85
NUP54-201ENST00000264883 TMEM219Q86XT9 240 aa9.77□□□□□ -0.85
NUP54-201ENST00000264883 SPANXCQ9NY87 97 aa9.77□□□□□ -0.85
NUP54-201ENST00000264883 ZNF462Q96JM2 2506 aa9.77□□□□□ -0.85
NUP54-201ENST00000264883 I3L3M4 83 aa9.77□□□□□ -0.85
NUP54-201ENST00000264883 GNRH2O43555 120 aa9.77□□□□□ -0.85
NUP54-201ENST00000264883 IGHV1-69P01742 117 aa9.77□□□□□ -0.85
NUP54-201ENST00000264883 COX7CP15954 63 aa9.77□□□□□ -0.85
NUP54-201ENST00000264883 Q6ZSV7 163 aa9.77□□□□□ -0.85
NUP54-201ENST00000264883 APRG1Q8IVJ8 170 aa9.77□□□□□ -0.85
NUP54-201ENST00000264883 ZFAND2AQ8N6M9 145 aa9.77□□□□□ -0.85
NUP54-201ENST00000264883 LITAFQ99732 161 aa9.77□□□□□ -0.85
NUP54-201ENST00000264883 ZNF580Q9UK33 172 aa9.77□□□□□ -0.85
NUP54-201ENST00000264883 KIF25-AS1Q9Y6Z4 181 aa9.77□□□□□ -0.85
NUP54-201ENST00000264883 ADARB2-AS1A8MUL3 147 aa9.76□□□□□ -0.85
NUP54-201ENST00000264883 LY6HO94772 140 aa9.76□□□□□ -0.85
NUP54-201ENST00000264883 NXPH4O95158 308 aa9.76□□□□□ -0.85
NUP54-201ENST00000264883 LINC00315P59091 139 aa9.76□□□□□ -0.85
NUP54-201ENST00000264883 SUMO4Q6EEV6 95 aa9.76□□□□□ -0.85
NUP54-201ENST00000264883 RNASE3P12724 160 aaKnown RBP9.75□□□□□ -0.85
NUP54-201ENST00000264883 SPTAN1Q13813 2472 aaKnown RBP9.75□□□□□ -0.85
NUP54-201ENST00000264883 FAM19A4Q96LR4 140 aa9.75□□□□□ -0.85
NUP54-201ENST00000264883 ARHGAP32A7KAX9 2087 aa9.75□□□□□ -0.85
NUP54-201ENST00000264883 COL12A1Q99715 3063 aa9.75□□□□□ -0.85
NUP54-201ENST00000264883 A0A0J9YXV3 536 aa9.74□□□□□ -0.85
NUP54-201ENST00000264883 F5H697 171 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms