RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 TRBV10-1A0A0K0K1A3 114 aa12.85□□□□□ -0.35
CROCCP3-201ENST00000263511 MDFICQ9P1T7 246 aa12.85□□□□□ -0.35
CROCCP3-201ENST00000263511 Q6YL49 198 aa12.85□□□□□ -0.35
CROCCP3-201ENST00000263511 CCDC140Q96MF4 163 aa12.85□□□□□ -0.35
CROCCP3-201ENST00000263511 TRACP01848 142 aa12.84□□□□□ -0.35
CROCCP3-201ENST00000263511 PLXNB3Q9ULL4 1909 aa12.84□□□□□ -0.35
CROCCP3-201ENST00000263511 A4D1N5 150 aa12.84□□□□□ -0.35
CROCCP3-201ENST00000263511 PRO3102Q9H379 93 aa12.84□□□□□ -0.35
CROCCP3-201ENST00000263511 LINC00173Q6ZV60 143 aa12.84□□□□□ -0.35
CROCCP3-201ENST00000263511 WFDC11Q8NEX6 87 aa12.84□□□□□ -0.35
CROCCP3-201ENST00000263511 WNK1Q9H4A3 2382 aa12.84□□□□□ -0.35
CROCCP3-201ENST00000263511 BAALCQ8WXS3 180 aa12.84□□□□□ -0.35
CROCCP3-201ENST00000263511 H3BQ85 93 aa12.83□□□□□ -0.36
CROCCP3-201ENST00000263511 ANKRD39Q53RE8 183 aa12.83□□□□□ -0.36
CROCCP3-201ENST00000263511 IGF1P05019 195 aa12.83□□□□□ -0.36
CROCCP3-201ENST00000263511 FSTL3O95633 263 aa12.83□□□□□ -0.36
CROCCP3-201ENST00000263511 C11orf45Q8TAV5 145 aa12.83□□□□□ -0.36
CROCCP3-201ENST00000263511 B5MCH6 92 aa12.82□□□□□ -0.36
CROCCP3-201ENST00000263511 NDUFB1O75438 58 aa12.82□□□□□ -0.36
CROCCP3-201ENST00000263511 C2orf16Q68DN1 1984 aa12.82□□□□□ -0.36
CROCCP3-201ENST00000263511 ADAMTS9Q9P2N4 1935 aa12.82□□□□□ -0.36
CROCCP3-201ENST00000263511 CHD3Q12873 2000 aaKnown RBP12.82□□□□□ -0.36
CROCCP3-201ENST00000263511 LINC01548A6NM66 108 aa12.81□□□□□ -0.36
CROCCP3-201ENST00000263511 ACYP1P07311 99 aa12.81□□□□□ -0.36
CROCCP3-201ENST00000263511 SS18L2Q9UHA2 77 aa12.81□□□□□ -0.36
CROCCP3-201ENST00000263511 IGKV1D-37A0A075B6S9 117 aa12.81□□□□□ -0.36
CROCCP3-201ENST00000263511 LGALS9O00182 355 aa12.81□□□□□ -0.36
CROCCP3-201ENST00000263511 C20orf203Q8NBC4 194 aa12.8□□□□□ -0.36
CROCCP3-201ENST00000263511 FREM1Q5H8C1 2179 aa12.8□□□□□ -0.36
CROCCP3-201ENST00000263511 NCR3O14931 201 aa12.8□□□□□ -0.36
CROCCP3-201ENST00000263511 DAND5Q8N907 189 aa12.8□□□□□ -0.36
CROCCP3-201ENST00000263511 C11orf86A6NJI1 115 aa12.79□□□□□ -0.36
CROCCP3-201ENST00000263511 TAX1BP3O14907 124 aa12.79□□□□□ -0.36
CROCCP3-201ENST00000263511 C4orf48Q5BLP8 95 aa12.79□□□□□ -0.36
CROCCP3-201ENST00000263511 P0C879 139 aa12.79□□□□□ -0.36
CROCCP3-201ENST00000263511 PROP1O75360 226 aa12.79□□□□□ -0.36
CROCCP3-201ENST00000263511 IGHV4-28A0A0C4DH34 117 aa12.79□□□□□ -0.36
CROCCP3-201ENST00000263511 C19orf71A6NCJ1 209 aa12.79□□□□□ -0.36
CROCCP3-201ENST00000263511 E9PLD3 99 aa12.79□□□□□ -0.36
CROCCP3-201ENST00000263511 RS1O15537 224 aa12.79□□□□□ -0.36
CROCCP3-201ENST00000263511 ODF3Q96PU9 254 aa12.79□□□□□ -0.36
CROCCP3-201ENST00000263511 INAFM1C9JVW0 142 aa12.78□□□□□ -0.36
CROCCP3-201ENST00000263511 SMIM9A6NGZ8 99 aa12.77□□□□□ -0.36
CROCCP3-201ENST00000263511 C14orf177Q52M58 125 aa12.77□□□□□ -0.37
CROCCP3-201ENST00000263511 DIRC1Q969H9 104 aa12.77□□□□□ -0.37
CROCCP3-201ENST00000263511 C22orf34Q6ZV56 151 aa12.77□□□□□ -0.37
CROCCP3-201ENST00000263511 IGHV1-58A0A0C4DH39 117 aa12.76□□□□□ -0.37
CROCCP3-201ENST00000263511 DEFB114Q30KQ6 69 aa12.76□□□□□ -0.37
CROCCP3-201ENST00000263511 K7EQG2 157 aa12.76□□□□□ -0.37
CROCCP3-201ENST00000263511 HIGD1BQ9P298 99 aa12.76□□□□□ -0.37
CROCCP3-201ENST00000263511 TRAV26-1A0A087WT03 109 aa12.75□□□□□ -0.37
CROCCP3-201ENST00000263511 ZNF843Q8N446 348 aa12.75□□□□□ -0.37
CROCCP3-201ENST00000263511 MIR7-3HGQ8N6C7 128 aa12.75□□□□□ -0.37
CROCCP3-201ENST00000263511 C11orf1Q9H5F2 150 aa12.75□□□□□ -0.37
CROCCP3-201ENST00000263511 LYRM9A8MSI8 78 aa12.75□□□□□ -0.37
CROCCP3-201ENST00000263511 NREPQ16612 68 aa12.75□□□□□ -0.37
CROCCP3-201ENST00000263511 Q6ZTI0 123 aa12.75□□□□□ -0.37
CROCCP3-201ENST00000263511 LTBP2Q14767 1821 aa12.75□□□□□ -0.37
CROCCP3-201ENST00000263511 MYO18BQ8IUG5 2567 aa12.75□□□□□ -0.37
CROCCP3-201ENST00000263511 COL4A3Q01955 1670 aa12.75□□□□□ -0.37
CROCCP3-201ENST00000263511 SHISA2Q6UWI4 295 aa12.75□□□□□ -0.37
CROCCP3-201ENST00000263511 FAM222AQ5U5X8 452 aa12.74□□□□□ -0.37
CROCCP3-201ENST00000263511 LINC01620Q4KN68 170 aa12.73□□□□□ -0.37
CROCCP3-201ENST00000263511 HILS1P60008 231 aa12.73□□□□□ -0.37
CROCCP3-201ENST00000263511 EBI3Q14213 229 aa12.73□□□□□ -0.37
CROCCP3-201ENST00000263511 LECT2O14960 151 aa12.73□□□□□ -0.37
CROCCP3-201ENST00000263511 WFDC2Q14508 124 aa12.73□□□□□ -0.37
CROCCP3-201ENST00000263511 TTTY13Q9BZ97 58 aa12.73□□□□□ -0.37
CROCCP3-201ENST00000263511 JMJD7-PLA2G4BH0Y9G9 81 aa12.72□□□□□ -0.37
CROCCP3-201ENST00000263511 ZNF80P51504 273 aaPredicted RBP12.72□□□□□ -0.37
CROCCP3-201ENST00000263511 Q6ZSV7 163 aa12.72□□□□□ -0.37
CROCCP3-201ENST00000263511 ODF1Q14990 250 aa12.72□□□□□ -0.37
CROCCP3-201ENST00000263511 TMEM131Q92545 1883 aa12.72□□□□□ -0.37
CROCCP3-201ENST00000263511 BRWD1-AS2P59051 145 aa12.72□□□□□ -0.37
CROCCP3-201ENST00000263511 Q6ZUT4 128 aa12.72□□□□□ -0.37
CROCCP3-201ENST00000263511 FXYD2P54710 66 aa12.71□□□□□ -0.37
CROCCP3-201ENST00000263511 TP53TG3Q9ULZ0 132 aa12.71□□□□□ -0.37
CROCCP3-201ENST00000263511 C11orf71Q6IPW1 123 aa12.71□□□□□ -0.37
CROCCP3-201ENST00000263511 SPATA25Q9BR10 227 aa12.71□□□□□ -0.37
CROCCP3-201ENST00000263511 G3V4G9 280 aa12.7□□□□□ -0.38
CROCCP3-201ENST00000263511 SMIM20Q8N5G0 67 aa12.7□□□□□ -0.38
CROCCP3-201ENST00000263511 RNF183Q96D59 192 aa12.7□□□□□ -0.38
CROCCP3-201ENST00000263511 SORL1Q92673 2214 aa12.7□□□□□ -0.38
CROCCP3-201ENST00000263511 REG3AQ06141 175 aa12.7□□□□□ -0.38
CROCCP3-201ENST00000263511 CEMP1Q6PRD7 247 aaPredicted RBP12.7□□□□□ -0.38
CROCCP3-201ENST00000263511 SPANXCQ9NY87 97 aa12.7□□□□□ -0.38
CROCCP3-201ENST00000263511 DEFB131BA0A096LNP1 70 aa12.69□□□□□ -0.38
CROCCP3-201ENST00000263511 A0A0B4J2C4 111 aa12.69□□□□□ -0.38
CROCCP3-201ENST00000263511 FRMD6-AS1P0C7T7 363 aa12.69□□□□□ -0.38
CROCCP3-201ENST00000263511 LINC00269Q8N2A0 174 aa12.69□□□□□ -0.38
CROCCP3-201ENST00000263511 ZFAND2AQ8N6M9 145 aa12.69□□□□□ -0.38
CROCCP3-201ENST00000263511 NAV2Q8IVL1 2488 aa12.69□□□□□ -0.38
CROCCP3-201ENST00000263511 PIEZO1Q92508 2521 aa12.69□□□□□ -0.38
CROCCP3-201ENST00000263511 MP68P56378 58 aa12.69□□□□□ -0.38
CROCCP3-201ENST00000263511 HIGD2BQ4VC39 106 aa12.69□□□□□ -0.38
CROCCP3-201ENST00000263511 B9D2Q9BPU9 175 aa12.69□□□□□ -0.38
CROCCP3-201ENST00000263511 LY6LH3BQJ8 138 aa12.69□□□□□ -0.38
CROCCP3-201ENST00000263511 CRYGBP07316 175 aa12.69□□□□□ -0.38
CROCCP3-201ENST00000263511 RBM3P98179 157 aaKnown RBP12.69□□□□□ -0.38
CROCCP3-201ENST00000263511 UFSP1Q6NVU6 142 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms