RNA–Protein interactions for RNA: ENST00000261439.8

TBC1D1-201, Transcript of TBC1 domain family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TBC1D1, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-201ENST00000261439 SEM1Q6ZVN7 128 aa11.12□□□□□ -0.63
TBC1D1-201ENST00000261439 ZNF295-AS1Q8N0V1 137 aa11.12□□□□□ -0.63
TBC1D1-201ENST00000261439 DENND4AQ7Z401 1863 aa11.12□□□□□ -0.63
TBC1D1-201ENST00000261439 ATP5G1P05496 136 aa11.12□□□□□ -0.63
TBC1D1-201ENST00000261439 BRWD1-AS2P59051 145 aa11.12□□□□□ -0.63
TBC1D1-201ENST00000261439 HHLA3Q9XRX5 114 aa11.12□□□□□ -0.63
TBC1D1-201ENST00000261439 TNCP24821 2201 aa11.12□□□□□ -0.63
TBC1D1-201ENST00000261439 WISP2O76076 250 aa11.12□□□□□ -0.63
TBC1D1-201ENST00000261439 IGKV2D-26A0A0A0MRZ7 120 aa11.11□□□□□ -0.63
TBC1D1-201ENST00000261439 DSCAML1Q8TD84 2053 aa11.11□□□□□ -0.63
TBC1D1-201ENST00000261439 MP68P56378 58 aa11.11□□□□□ -0.63
TBC1D1-201ENST00000261439 PLXNB3Q9ULL4 1909 aa11.11□□□□□ -0.63
TBC1D1-201ENST00000261439 P0DMU3 169 aa11.1□□□□□ -0.63
TBC1D1-201ENST00000261439 FAM231AP0DMU4 169 aa11.1□□□□□ -0.63
TBC1D1-201ENST00000261439 FAM231CP0DMU5 169 aa11.1□□□□□ -0.63
TBC1D1-201ENST00000261439 DEFB4AO15263 64 aa11.1□□□□□ -0.63
TBC1D1-201ENST00000261439 PROP1O75360 226 aa11.1□□□□□ -0.63
TBC1D1-201ENST00000261439 TIRAPP58753 221 aa11.1□□□□□ -0.63
TBC1D1-201ENST00000261439 NRGNQ92686 78 aa11.1□□□□□ -0.63
TBC1D1-201ENST00000261439 COL4A3Q01955 1670 aa11.1□□□□□ -0.63
TBC1D1-201ENST00000261439 NDUFC2O95298 119 aa11.1□□□□□ -0.63
TBC1D1-201ENST00000261439 SPART-AS1P0CW21 52 aa11.1□□□□□ -0.63
TBC1D1-201ENST00000261439 TNRC6BQ9UPQ9 1833 aaKnown RBP11.09□□□□□ -0.63
TBC1D1-201ENST00000261439 TEX49A0A1B0GTD5 131 aa11.09□□□□□ -0.63
TBC1D1-201ENST00000261439 K7EMT4 169 aa11.09□□□□□ -0.63
TBC1D1-201ENST00000261439 OBSL1O75147 1896 aa11.09□□□□□ -0.63
TBC1D1-201ENST00000261439 MIAQ16674 131 aa11.09□□□□□ -0.63
TBC1D1-201ENST00000261439 SPATA25Q9BR10 227 aa11.09□□□□□ -0.63
TBC1D1-201ENST00000261439 TP53TG3Q9ULZ0 132 aa11.09□□□□□ -0.63
TBC1D1-201ENST00000261439 A0A0J9YXY3 114 aa11.08□□□□□ -0.64
TBC1D1-201ENST00000261439 NDUFA1O15239 70 aa11.08□□□□□ -0.64
TBC1D1-201ENST00000261439 TRAV23DV6A0A075B6W5 121 aa11.08□□□□□ -0.64
TBC1D1-201ENST00000261439 CHKB-CPT1BH3BT56 60 aa11.08□□□□□ -0.64
TBC1D1-201ENST00000261439 SPAG11BQ08648 103 aa11.08□□□□□ -0.64
TBC1D1-201ENST00000261439 GPHB5Q86YW7 130 aa11.08□□□□□ -0.64
TBC1D1-201ENST00000261439 LINC00643Q86TS7 51 aa11.07□□□□□ -0.64
TBC1D1-201ENST00000261439 FREM1Q5H8C1 2179 aa11.07□□□□□ -0.64
TBC1D1-201ENST00000261439 A0A0J9YX75 114 aa11.07□□□□□ -0.64
TBC1D1-201ENST00000261439 NDUFV3P56181 108 aaKnown RBP11.07□□□□□ -0.64
TBC1D1-201ENST00000261439 SPANXB1Q9NS25 103 aaPredicted RBP11.07□□□□□ -0.64
TBC1D1-201ENST00000261439 C1orf229Q6ZS94 237 aaPredicted RBP11.07□□□□□ -0.64
TBC1D1-201ENST00000261439 DIRC1Q969H9 104 aa11.07□□□□□ -0.64
TBC1D1-201ENST00000261439 TMEM256-PLSCR3K7ERE1 68 aa11.06□□□□□ -0.64
TBC1D1-201ENST00000261439 HIGD2BQ4VC39 106 aa11.06□□□□□ -0.64
TBC1D1-201ENST00000261439 C10orf105Q8TEF2 133 aa11.06□□□□□ -0.64
TBC1D1-201ENST00000261439 WFDC11Q8NEX6 87 aa11.06□□□□□ -0.64
TBC1D1-201ENST00000261439 MLST8Q9BVC4 326 aa11.06□□□□□ -0.64
TBC1D1-201ENST00000261439 KLK12Q9UKR0 248 aa11.06□□□□□ -0.64
TBC1D1-201ENST00000261439 C9orf66Q5T8R8 295 aa11.06□□□□□ -0.64
TBC1D1-201ENST00000261439 ZMAT4Q9H898 229 aa11.06□□□□□ -0.64
TBC1D1-201ENST00000261439 ADORA2A-AS1P86434 159 aa11.05□□□□□ -0.64
TBC1D1-201ENST00000261439 CCDC140Q96MF4 163 aa11.05□□□□□ -0.64
TBC1D1-201ENST00000261439 NDUFB1O75438 58 aa11.05□□□□□ -0.64
TBC1D1-201ENST00000261439 CRIP3Q6Q6R5 217 aa11.05□□□□□ -0.64
TBC1D1-201ENST00000261439 IGLC6P0CF74 106 aa11.05□□□□□ -0.64
TBC1D1-201ENST00000261439 MAPKAPK5-AS1Q8N8E1 139 aa11.05□□□□□ -0.64
TBC1D1-201ENST00000261439 LINC01548A6NM66 108 aa11.04□□□□□ -0.64
TBC1D1-201ENST00000261439 SDIM1Q6ZPB5 146 aa11.04□□□□□ -0.64
TBC1D1-201ENST00000261439 BRK1Q8WUW1 75 aa11.04□□□□□ -0.64
TBC1D1-201ENST00000261439 MBD6Q96DN6 1003 aa11.04□□□□□ -0.64
TBC1D1-201ENST00000261439 SIRPDQ9H106 197 aa11.04□□□□□ -0.64
TBC1D1-201ENST00000261439 A0A1W2PNU3 283 aaPredicted RBP11.04□□□□□ -0.64
TBC1D1-201ENST00000261439 DEFB113Q30KQ7 82 aa11.04□□□□□ -0.64
TBC1D1-201ENST00000261439 YPEL4Q96NS1 127 aa11.04□□□□□ -0.64
TBC1D1-201ENST00000261439 WNK1Q9H4A3 2382 aa11.04□□□□□ -0.64
TBC1D1-201ENST00000261439 DEFB135Q30KP9 77 aa11.04□□□□□ -0.64
TBC1D1-201ENST00000261439 NEXN-AS1Q8NBZ9 246 aa11.04□□□□□ -0.64
TBC1D1-201ENST00000261439 CXCL5P42830 114 aa11.03□□□□□ -0.64
TBC1D1-201ENST00000261439 H3BQ85 93 aa11.03□□□□□ -0.64
TBC1D1-201ENST00000261439 IGF1P05019 195 aa11.03□□□□□ -0.64
TBC1D1-201ENST00000261439 UPK3BQ9BT76 320 aa11.03□□□□□ -0.64
TBC1D1-201ENST00000261439 TM2D2Q9BX73 214 aa11.03□□□□□ -0.64
TBC1D1-201ENST00000261439 TANC1Q9C0D5 1861 aa11.02□□□□□ -0.64
TBC1D1-201ENST00000261439 PTPRQQ9UMZ3 2332 aa11.02□□□□□ -0.65
TBC1D1-201ENST00000261439 CCL18P55774 89 aa11.02□□□□□ -0.65
TBC1D1-201ENST00000261439 FAM208BQ5VWN6 2430 aa11.02□□□□□ -0.65
TBC1D1-201ENST00000261439 HIST2H2BDQ6DRA6 164 aa11.02□□□□□ -0.65
TBC1D1-201ENST00000261439 J3QKU1 62 aa11.02□□□□□ -0.65
TBC1D1-201ENST00000261439 FAM110AQ9BQ89 295 aa11.01□□□□□ -0.65
TBC1D1-201ENST00000261439 C20orf197Q8N268 126 aa11.01□□□□□ -0.65
TBC1D1-201ENST00000261439 F8W735 103 aaPredicted RBP11□□□□□ -0.65
TBC1D1-201ENST00000261439 NCOA6Q14686 2063 aaPredicted RBP11□□□□□ -0.65
TBC1D1-201ENST00000261439 NUP210Q8TEM1 1887 aaPredicted RBP11□□□□□ -0.65
TBC1D1-201ENST00000261439 TMEM263Q8WUH6 116 aaKnown RBP11□□□□□ -0.65
TBC1D1-201ENST00000261439 UBE2AP49459 152 aa11□□□□□ -0.65
TBC1D1-201ENST00000261439 CRIP1P50238 77 aa11□□□□□ -0.65
TBC1D1-201ENST00000261439 CDKN2A-AS1Q9UH64 79 aa11□□□□□ -0.65
TBC1D1-201ENST00000261439 ZFHX2Q9C0A1 2572 aaPredicted RBP11□□□□□ -0.65
TBC1D1-201ENST00000261439 SLPIP03973 132 aa11□□□□□ -0.65
TBC1D1-201ENST00000261439 LINC00467Q9BRT7 94 aa11□□□□□ -0.65
TBC1D1-201ENST00000261439 COX7BP24311 80 aa10.99□□□□□ -0.65
TBC1D1-201ENST00000261439 RBX1P62877 108 aa10.99□□□□□ -0.65
TBC1D1-201ENST00000261439 MAP6D1Q9H9H5 199 aa10.99□□□□□ -0.65
TBC1D1-201ENST00000261439 C4orf3Q8WVX3 66 aa10.99□□□□□ -0.65
TBC1D1-201ENST00000261439 Q6ZTI0 123 aa10.98□□□□□ -0.65
TBC1D1-201ENST00000261439 C20orf173Q96LM9 149 aa10.98□□□□□ -0.65
TBC1D1-201ENST00000261439 ZNF22P17026 224 aaPredicted RBP10.98□□□□□ -0.65
TBC1D1-201ENST00000261439 EIF4EBP1Q13541 118 aaPredicted RBP10.98□□□□□ -0.65
TBC1D1-201ENST00000261439 TRIAP1O43715 76 aa10.98□□□□□ -0.65
TBC1D1-201ENST00000261439 TMEM223A0PJW6 202 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms