RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 ENHOQ6UWT2 76 aa5.62□□□□□ -1.51
GPNMB-201ENST00000258733 C2orf83Q53S99 150 aa5.61□□□□□ -1.51
GPNMB-201ENST00000258733 C10orf113Q5VZT2 155 aa5.61□□□□□ -1.51
GPNMB-201ENST00000258733 TMEM141Q96I45 108 aa5.61□□□□□ -1.51
GPNMB-201ENST00000258733 IGIPA6NJ69 53 aa5.61□□□□□ -1.51
GPNMB-201ENST00000258733 FOLR3P41439 243 aa5.61□□□□□ -1.51
GPNMB-201ENST00000258733 RPL11P62913 178 aaKnown RBP5.61□□□□□ -1.51
GPNMB-201ENST00000258733 LY6G5CQ5SRR4 150 aa5.61□□□□□ -1.51
GPNMB-201ENST00000258733 KLK15Q9H2R5 256 aa5.61□□□□□ -1.51
GPNMB-201ENST00000258733 TRGV8A0A0C4DH27 118 aa5.61□□□□□ -1.51
GPNMB-201ENST00000258733 A0A1W2PNR3 127 aa5.61□□□□□ -1.51
GPNMB-201ENST00000258733 hDV103S1A0JD37 113 aa5.61□□□□□ -1.51
GPNMB-201ENST00000258733 H0Y9J4 135 aa5.61□□□□□ -1.51
GPNMB-201ENST00000258733 IGLV3-19P01714 112 aa5.61□□□□□ -1.51
GPNMB-201ENST00000258733 NNATQ16517 81 aa5.61□□□□□ -1.51
GPNMB-201ENST00000258733 Q6ZSV7 163 aa5.61□□□□□ -1.51
GPNMB-201ENST00000258733 SDHAF1A6NFY7 115 aa5.6□□□□□ -1.51
GPNMB-201ENST00000258733 IGLV2-11P01706 119 aa5.6□□□□□ -1.51
GPNMB-201ENST00000258733 Q6ZTC4 211 aa5.6□□□□□ -1.51
GPNMB-201ENST00000258733 C14orf132Q9NPU4 83 aa5.6□□□□□ -1.51
GPNMB-201ENST00000258733 CACNA1BQ00975 2339 aa5.6□□□□□ -1.51
GPNMB-201ENST00000258733 MUC4Q99102 2169 aa5.6□□□□□ -1.51
GPNMB-201ENST00000258733 C17orf82Q86X59 251 aaPredicted RBP5.6□□□□□ -1.51
GPNMB-201ENST00000258733 NDUFA12Q9UI09 145 aa5.6□□□□□ -1.51
GPNMB-201ENST00000258733 RANBP2P49792 3224 aaKnown RBP5.6□□□□□ -1.51
GPNMB-201ENST00000258733 CDH23Q9H251 3354 aa5.6□□□□□ -1.51
GPNMB-201ENST00000258733 IGHV5-10-1A0A0J9YXX1 117 aa5.59□□□□□ -1.51
GPNMB-201ENST00000258733 TRBV7-4A0A0J9YYF1 115 aa5.59□□□□□ -1.51
GPNMB-201ENST00000258733 TRBV6-1A0A0K0K1D8 114 aa5.59□□□□□ -1.51
GPNMB-201ENST00000258733 EIF4EBP1Q13541 118 aaPredicted RBP5.59□□□□□ -1.51
GPNMB-201ENST00000258733 ZNF575Q86XF7 245 aa5.59□□□□□ -1.51
GPNMB-201ENST00000258733 FLVCR1-AS1Q8TAF5 88 aa5.59□□□□□ -1.51
GPNMB-201ENST00000258733 LRCOL1A6NCL2 159 aa5.59□□□□□ -1.51
GPNMB-201ENST00000258733 C12orf77C9JDV5 145 aa5.59□□□□□ -1.51
GPNMB-201ENST00000258733 CXCL6P80162 114 aa5.59□□□□□ -1.51
GPNMB-201ENST00000258733 Q8IYB0 196 aa5.59□□□□□ -1.51
GPNMB-201ENST00000258733 C11orf72Q8NBR9 251 aa5.59□□□□□ -1.51
GPNMB-201ENST00000258733 IGLV4-69A0A075B6H9 119 aa5.58□□□□□ -1.52
GPNMB-201ENST00000258733 HCG22E2RYF7 251 aa5.58□□□□□ -1.52
GPNMB-201ENST00000258733 CRIP1P50238 77 aa5.58□□□□□ -1.52
GPNMB-201ENST00000258733 PIK3CD-AS1Q5SR53 167 aa5.58□□□□□ -1.52
GPNMB-201ENST00000258733 TMEM61Q8N0U2 210 aa5.58□□□□□ -1.52
GPNMB-201ENST00000258733 ZNF706Q9Y5V0 76 aaPredicted RBP5.58□□□□□ -1.52
GPNMB-201ENST00000258733 ZNF503-AS2A6NEH8 195 aa5.58□□□□□ -1.52
GPNMB-201ENST00000258733 CCL4P13236 92 aa5.58□□□□□ -1.52
GPNMB-201ENST00000258733 A0A0J9YX75 114 aa5.57□□□□□ -1.52
GPNMB-201ENST00000258733 DEFB103AP81534 67 aa5.57□□□□□ -1.52
GPNMB-201ENST00000258733 NDPQ00604 133 aa5.57□□□□□ -1.52
GPNMB-201ENST00000258733 TNRC6BQ9UPQ9 1833 aaKnown RBP5.57□□□□□ -1.52
GPNMB-201ENST00000258733 C5orf42Q9H799 3197 aa5.57□□□□□ -1.52
GPNMB-201ENST00000258733 S100A4P26447 101 aaKnown RBP5.57□□□□□ -1.52
GPNMB-201ENST00000258733 DEFB134Q4QY38 66 aa5.57□□□□□ -1.52
GPNMB-201ENST00000258733 PATE2Q6UY27 113 aa5.57□□□□□ -1.52
GPNMB-201ENST00000258733 TMEM254Q8TBM7 123 aa5.57□□□□□ -1.52
GPNMB-201ENST00000258733 MSRB1Q9NZV6 116 aa5.57□□□□□ -1.52
GPNMB-201ENST00000258733 TFF1P04155 84 aa5.57□□□□□ -1.52
GPNMB-201ENST00000258733 LEPROTO15243 131 aa5.56□□□□□ -1.52
GPNMB-201ENST00000258733 Q5VV11 94 aa5.56□□□□□ -1.52
GPNMB-201ENST00000258733 ARRDC1-AS1Q9H2J1 176 aa5.56□□□□□ -1.52
GPNMB-201ENST00000258733 SDK2Q58EX2 2172 aa5.56□□□□□ -1.52
GPNMB-201ENST00000258733 TNCP24821 2201 aa5.56□□□□□ -1.52
GPNMB-201ENST00000258733 TRAV10A0A0B4J240 114 aa5.56□□□□□ -1.52
GPNMB-201ENST00000258733 A0A0J9YXY3 114 aa5.56□□□□□ -1.52
GPNMB-201ENST00000258733 BBC3Q96PG8 261 aaPredicted RBP5.56□□□□□ -1.52
GPNMB-201ENST00000258733 TMEM14BQ9NUH8 114 aa5.56□□□□□ -1.52
GPNMB-201ENST00000258733 IGLV3-12A0A075B6K2 115 aa5.55□□□□□ -1.52
GPNMB-201ENST00000258733 SOCS3O14543 225 aa5.55□□□□□ -1.52
GPNMB-201ENST00000258733 C6orf99Q4VX62 202 aa5.55□□□□□ -1.52
GPNMB-201ENST00000258733 C2orf66Q6UXQ4 117 aa5.55□□□□□ -1.52
GPNMB-201ENST00000258733 RP1P56715 2156 aa5.55□□□□□ -1.52
GPNMB-201ENST00000258733 GNRH2O43555 120 aa5.55□□□□□ -1.52
GPNMB-201ENST00000258733 IGLV3-21P80748 117 aaPredicted RBP5.55□□□□□ -1.52
GPNMB-201ENST00000258733 OBSCN-AS1Q96MR7 158 aa5.55□□□□□ -1.52
GPNMB-201ENST00000258733 SMIM2Q9BVW6 85 aa5.55□□□□□ -1.52
GPNMB-201ENST00000258733 PRUNE2Q8WUY3 3088 aa5.55□□□□□ -1.52
GPNMB-201ENST00000258733 CHD7Q9P2D1 2997 aa5.54□□□□□ -1.52
GPNMB-201ENST00000258733 PRYO14603 147 aa5.54□□□□□ -1.52
GPNMB-201ENST00000258733 CHKB-CPT1BH3BT56 60 aa5.54□□□□□ -1.52
GPNMB-201ENST00000258733 LITAFQ99732 161 aa5.54□□□□□ -1.52
GPNMB-201ENST00000258733 CNFNQ9BYD5 112 aa5.54□□□□□ -1.52
GPNMB-201ENST00000258733 ERC2-IT1O76042 136 aa5.53□□□□□ -1.52
GPNMB-201ENST00000258733 ZDBF2Q9HCK1 2354 aa5.53□□□□□ -1.52
GPNMB-201ENST00000258733 K7EQG2 157 aa5.53□□□□□ -1.52
GPNMB-201ENST00000258733 C9orf129Q5T035 196 aaKnown RBP5.53□□□□□ -1.52
GPNMB-201ENST00000258733 PRRC2BQ5JSZ5 2229 aaKnown RBP5.53□□□□□ -1.52
GPNMB-201ENST00000258733 HCP5Q6MZN7 132 aa5.53□□□□□ -1.52
GPNMB-201ENST00000258733 FDCSPQ8NFU4 85 aa5.53□□□□□ -1.52
GPNMB-201ENST00000258733 DEC1Q9P2X7 70 aa5.53□□□□□ -1.52
GPNMB-201ENST00000258733 PRM2P04554 102 aa5.52□□□□□ -1.53
GPNMB-201ENST00000258733 MIAQ16674 131 aa5.52□□□□□ -1.53
GPNMB-201ENST00000258733 C18orf65Q6ZTR6 163 aa5.52□□□□□ -1.53
GPNMB-201ENST00000258733 C8orf49Q96NF6 230 aa5.52□□□□□ -1.53
GPNMB-201ENST00000258733 X6R8D5 127 aa5.52□□□□□ -1.53
GPNMB-201ENST00000258733 RPS21P63220 83 aaKnown RBP5.52□□□□□ -1.53
GPNMB-201ENST00000258733 Q9HAA7 133 aa5.52□□□□□ -1.53
GPNMB-201ENST00000258733 TMEM14CQ9P0S9 112 aa5.52□□□□□ -1.53
GPNMB-201ENST00000258733 XIRP2A4UGR9 3374 aa5.52□□□□□ -1.53
GPNMB-201ENST00000258733 KIAA0087Q14695 138 aa5.51□□□□□ -1.53
GPNMB-201ENST00000258733 C1orf64Q8NEQ6 169 aa5.51□□□□□ -1.53
GPNMB-201ENST00000258733 FAM218AQ96MZ4 157 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms