RNA–Protein interactions for RNA: ENST00000255448.8

DCLK1-201, Transcript of doublecortin like kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK1, Length 5,703 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-201ENST00000255448 Q6ZSR3 168 aa8.42□□□□□ -1.06
DCLK1-201ENST00000255448 IGHV4-61A0A0C4DH41 118 aa8.42□□□□□ -1.06
DCLK1-201ENST00000255448 IGHV4-59P01825 116 aa8.42□□□□□ -1.06
DCLK1-201ENST00000255448 XCL1P47992 114 aa8.42□□□□□ -1.06
DCLK1-201ENST00000255448 NKAPP1Q8N9T2 125 aa8.42□□□□□ -1.06
DCLK1-201ENST00000255448 PRO3102Q9H379 93 aa8.42□□□□□ -1.06
DCLK1-201ENST00000255448 A0A0J9YXY3 114 aa8.41□□□□□ -1.06
DCLK1-201ENST00000255448 A0A0J9YY99 117 aa8.41□□□□□ -1.06
DCLK1-201ENST00000255448 I3L2K1 104 aa8.41□□□□□ -1.06
DCLK1-201ENST00000255448 FAM19A5Q7Z5A7 132 aaPredicted RBP8.41□□□□□ -1.06
DCLK1-201ENST00000255448 NFE4Q86UQ8 179 aa8.41□□□□□ -1.06
DCLK1-201ENST00000255448 COX7A2LO14548 114 aa8.41□□□□□ -1.06
DCLK1-201ENST00000255448 MIAQ16674 131 aa8.41□□□□□ -1.06
DCLK1-201ENST00000255448 IGHV1-58A0A0C4DH39 117 aa8.41□□□□□ -1.06
DCLK1-201ENST00000255448 IGHV3-33P01772 117 aa8.4□□□□□ -1.06
DCLK1-201ENST00000255448 ENHOQ6UWT2 76 aa8.4□□□□□ -1.06
DCLK1-201ENST00000255448 ADORA2A-AS1P86434 159 aa8.4□□□□□ -1.06
DCLK1-201ENST00000255448 CUL9Q8IWT3 2517 aa8.4□□□□□ -1.06
DCLK1-201ENST00000255448 K7EIM0 57 aa8.4□□□□□ -1.06
DCLK1-201ENST00000255448 P0DMU3 169 aa8.4□□□□□ -1.06
DCLK1-201ENST00000255448 FAM231AP0DMU4 169 aa8.4□□□□□ -1.06
DCLK1-201ENST00000255448 FAM231CP0DMU5 169 aa8.4□□□□□ -1.06
DCLK1-201ENST00000255448 RPL18AQ02543 176 aaKnown RBP8.4□□□□□ -1.06
DCLK1-201ENST00000255448 MLST8Q9BVC4 326 aa8.4□□□□□ -1.07
DCLK1-201ENST00000255448 USP17L23D6RBM5 183 aa8.4□□□□□ -1.07
DCLK1-201ENST00000255448 FUSP35637 526 aaKnown RBP eCLIP8.4□□□□□ -1.07
DCLK1-201ENST00000255448 HIST2H2BCQ6DN03 193 aa8.4□□□□□ -1.07
DCLK1-201ENST00000255448 TIMM17BO60830 172 aa8.39□□□□□ -1.07
DCLK1-201ENST00000255448 CXCL5P42830 114 aa8.39□□□□□ -1.07
DCLK1-201ENST00000255448 FBXL19-AS1Q494R0 122 aa8.39□□□□□ -1.07
DCLK1-201ENST00000255448 FANCD2OSQ96PS1 177 aa8.39□□□□□ -1.07
DCLK1-201ENST00000255448 IGHV4-30-2A0A087WSY4 118 aa8.39□□□□□ -1.07
DCLK1-201ENST00000255448 RMI2Q96E14 147 aa8.39□□□□□ -1.07
DCLK1-201ENST00000255448 TRBV6-1A0A0K0K1D8 114 aa8.39□□□□□ -1.07
DCLK1-201ENST00000255448 NPBQ8NG41 125 aa8.39□□□□□ -1.07
DCLK1-201ENST00000255448 RITA1Q96K30 269 aa8.39□□□□□ -1.07
DCLK1-201ENST00000255448 TEX22C9J3V5 150 aa8.39□□□□□ -1.07
DCLK1-201ENST00000255448 Q6Q795 121 aa8.39□□□□□ -1.07
DCLK1-201ENST00000255448 C20orf173Q96LM9 149 aa8.38□□□□□ -1.07
DCLK1-201ENST00000255448 CSDC2Q9Y534 153 aaKnown RBP8.38□□□□□ -1.07
DCLK1-201ENST00000255448 CACNA1AO00555 2505 aa8.38□□□□□ -1.07
DCLK1-201ENST00000255448 E7EUB6 86 aa8.38□□□□□ -1.07
DCLK1-201ENST00000255448 TMEM256-PLSCR3K7ERE1 68 aa8.38□□□□□ -1.07
DCLK1-201ENST00000255448 CCL24O00175 119 aa8.38□□□□□ -1.07
DCLK1-201ENST00000255448 NEXN-AS1Q8NBZ9 246 aa8.38□□□□□ -1.07
DCLK1-201ENST00000255448 TRBV30A0A0K0K1B3 111 aa8.38□□□□□ -1.07
DCLK1-201ENST00000255448 A0A1W2PNU3 283 aaPredicted RBP8.38□□□□□ -1.07
DCLK1-201ENST00000255448 PPDPFQ9H3Y8 114 aa8.38□□□□□ -1.07
DCLK1-201ENST00000255448 MIR7-3HGQ8N6C7 128 aa8.38□□□□□ -1.07
DCLK1-201ENST00000255448 SNURFQ9Y675 71 aa8.38□□□□□ -1.07
DCLK1-201ENST00000255448 LOC107984640A0A0U1RRK4 108 aa8.37□□□□□ -1.07
DCLK1-201ENST00000255448 P0C879 139 aa8.37□□□□□ -1.07
DCLK1-201ENST00000255448 Q6ZQT7 251 aa8.37□□□□□ -1.07
DCLK1-201ENST00000255448 PLXNB1O43157 2135 aa8.37□□□□□ -1.07
DCLK1-201ENST00000255448 FREM1Q5H8C1 2179 aa8.37□□□□□ -1.07
DCLK1-201ENST00000255448 NDUFS5O43920 106 aa8.37□□□□□ -1.07
DCLK1-201ENST00000255448 ZMAT4Q9H898 229 aa8.37□□□□□ -1.07
DCLK1-201ENST00000255448 ZNF80P51504 273 aaPredicted RBP8.37□□□□□ -1.07
DCLK1-201ENST00000255448 Q6ZPA2 131 aa8.37□□□□□ -1.07
DCLK1-201ENST00000255448 HIST2H2BDQ6DRA6 164 aa8.36□□□□□ -1.07
DCLK1-201ENST00000255448 MED13Q9UHV7 2174 aa8.36□□□□□ -1.07
DCLK1-201ENST00000255448 C9orf66Q5T8R8 295 aa8.36□□□□□ -1.07
DCLK1-201ENST00000255448 A0A096LPF7 62 aa8.36□□□□□ -1.07
DCLK1-201ENST00000255448 TNRC6BQ9UPQ9 1833 aaKnown RBP8.36□□□□□ -1.07
DCLK1-201ENST00000255448 ANGP03950 147 aaKnown RBP8.36□□□□□ -1.07
DCLK1-201ENST00000255448 IGHV7-81A0A0B4J1V7 117 aa8.35□□□□□ -1.07
DCLK1-201ENST00000255448 IGHV4-38-2P0DP08 117 aa8.35□□□□□ -1.07
DCLK1-201ENST00000255448 SEM1Q6ZVN7 128 aa8.35□□□□□ -1.07
DCLK1-201ENST00000255448 C20orf203Q8NBC4 194 aa8.35□□□□□ -1.07
DCLK1-201ENST00000255448 DENND4CQ5VZ89 1909 aa8.35□□□□□ -1.07
DCLK1-201ENST00000255448 CTSGP08311 255 aa8.35□□□□□ -1.07
DCLK1-201ENST00000255448 CEMP1Q6PRD7 247 aaPredicted RBP8.35□□□□□ -1.07
DCLK1-201ENST00000255448 SPRNQ5BIV9 151 aa8.35□□□□□ -1.07
DCLK1-201ENST00000255448 KLK5Q9Y337 293 aaPredicted RBP8.35□□□□□ -1.07
DCLK1-201ENST00000255448 OBSL1O75147 1896 aa8.35□□□□□ -1.07
DCLK1-201ENST00000255448 IGKV1D-37A0A075B6S9 117 aa8.34□□□□□ -1.07
DCLK1-201ENST00000255448 NCR3O14931 201 aa8.34□□□□□ -1.07
DCLK1-201ENST00000255448 PIEZO1Q92508 2521 aa8.34□□□□□ -1.07
DCLK1-201ENST00000255448 IGHV3-30P01768 117 aa8.34□□□□□ -1.07
DCLK1-201ENST00000255448 IGHV3-30-5P0DP03 117 aa8.34□□□□□ -1.07
DCLK1-201ENST00000255448 SPG11Q96JI7 2443 aa8.34□□□□□ -1.07
DCLK1-201ENST00000255448 LTBP2Q14767 1821 aa8.34□□□□□ -1.07
DCLK1-201ENST00000255448 SMIM26A0A096LP01 95 aa8.34□□□□□ -1.07
DCLK1-201ENST00000255448 BRWD1-AS2P59051 145 aa8.34□□□□□ -1.07
DCLK1-201ENST00000255448 SCXQ7RTU7 201 aa8.34□□□□□ -1.07
DCLK1-201ENST00000255448 KIAA1549Q9HCM3 1950 aa8.33□□□□□ -1.08
DCLK1-201ENST00000255448 IGLV11-55A0A075B6I3 123 aa8.33□□□□□ -1.08
DCLK1-201ENST00000255448 TRBV7-3A0A075B6L6 115 aa8.33□□□□□ -1.08
DCLK1-201ENST00000255448 HIGD2BQ4VC39 106 aa8.33□□□□□ -1.08
DCLK1-201ENST00000255448 ATP5EP2Q5VTU8 51 aa8.33□□□□□ -1.08
DCLK1-201ENST00000255448 LINC00526Q96FQ7 95 aa8.33□□□□□ -1.08
DCLK1-201ENST00000255448 MED12LQ86YW9 2145 aa8.33□□□□□ -1.08
DCLK1-201ENST00000255448 SLPIP03973 132 aa8.33□□□□□ -1.08
DCLK1-201ENST00000255448 ANKHD1Q8IWZ3 2542 aaKnown RBP8.33□□□□□ -1.08
DCLK1-201ENST00000255448 C9orf47Q6ZRZ4 202 aa8.33□□□□□ -1.08
DCLK1-201ENST00000255448 PRORYQ9H606 182 aa8.33□□□□□ -1.08
DCLK1-201ENST00000255448 TMEM89A2RUT3 159 aa8.32□□□□□ -1.08
DCLK1-201ENST00000255448 DEFB1P60022 68 aa8.32□□□□□ -1.08
DCLK1-201ENST00000255448 KIF26AQ9ULI4 1882 aaPredicted RBP8.32□□□□□ -1.08
DCLK1-201ENST00000255448 CHKB-CPT1BH3BT56 60 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms