RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 GPHB5Q86YW7 130 aa15.09■□□□□ 0.01
SOX4-201ENST00000244745 Q8NA96 180 aa15.09■□□□□ 0.01
SOX4-201ENST00000244745 SRCAPQ6ZRS2 3230 aa15.09■□□□□ 0.01
SOX4-201ENST00000244745 IGKV2D-26A0A0A0MRZ7 120 aa15.09■□□□□ 0.01
SOX4-201ENST00000244745 CEMP1Q6PRD7 247 aaPredicted RBP15.09■□□□□ 0.01
SOX4-201ENST00000244745 IGHV1-58A0A0C4DH39 117 aa15.09■□□□□ 0.01
SOX4-201ENST00000244745 TEX49A0A1B0GTD5 131 aa15.09■□□□□ 0.01
SOX4-201ENST00000244745 MAPKAPK5-AS1Q8N8E1 139 aa15.09■□□□□ 0.01
SOX4-201ENST00000244745 C2orf91Q6ZV80 131 aa15.09■□□□□ 0.01
SOX4-201ENST00000244745 CRIP1P50238 77 aa15.08■□□□□ 0.01
SOX4-201ENST00000244745 TRBV7-3A0A075B6L6 115 aa15.08■□□□□ 0
SOX4-201ENST00000244745 DEFB105AQ8NG35 78 aa15.08■□□□□ 0
SOX4-201ENST00000244745 VSIG2Q96IQ7 327 aa15.07■□□□□ 0
SOX4-201ENST00000244745 LECT2O14960 151 aa15.07■□□□□ 0
SOX4-201ENST00000244745 IGHV3-30-3P0DP02 117 aa15.07■□□□□ 0
SOX4-201ENST00000244745 C20orf203Q8NBC4 194 aa15.06■□□□□ 0
SOX4-201ENST00000244745 DEFB113Q30KQ7 82 aa15.06■□□□□ 0
SOX4-201ENST00000244745 HIST2H2BCQ6DN03 193 aa15.06■□□□□ 0
SOX4-201ENST00000244745 MIAQ16674 131 aa15.05■□□□□ 0
SOX4-201ENST00000244745 LINC00643Q86TS7 51 aa15.05■□□□□ 0
SOX4-201ENST00000244745 NEXN-AS1Q8NBZ9 246 aa15.05■□□□□ 0
SOX4-201ENST00000244745 C20orf173Q96LM9 149 aa15.05■□□□□ 0
SOX4-201ENST00000244745 Q9HAA7 133 aa15.05■□□□□ 0
SOX4-201ENST00000244745 A0A0J9YX75 114 aa15.05■□□□□ 0
SOX4-201ENST00000244745 P0DMU3 169 aa15.05■□□□□ -0
SOX4-201ENST00000244745 FAM231AP0DMU4 169 aa15.05■□□□□ -0
SOX4-201ENST00000244745 FAM231CP0DMU5 169 aa15.05■□□□□ -0
SOX4-201ENST00000244745 NDUFC2O95298 119 aa15.05■□□□□ -0
SOX4-201ENST00000244745 NCR3O14931 201 aa15.04■□□□□ -0
SOX4-201ENST00000244745 ZGRF1Q86YA3 2104 aa15.04■□□□□ -0
SOX4-201ENST00000244745 IGKV2D-24A0A075B6R9 120 aa15.04■□□□□ -0
SOX4-201ENST00000244745 A6NDX4 124 aa15.04■□□□□ -0
SOX4-201ENST00000244745 A0A0J9YXY3 114 aa15.04■□□□□ -0
SOX4-201ENST00000244745 IGF1P05019 195 aa15.04■□□□□ -0
SOX4-201ENST00000244745 ATP5G1P05496 136 aa15.04■□□□□ -0
SOX4-201ENST00000244745 MYCNOSP40205 109 aa15.03■□□□□ -0
SOX4-201ENST00000244745 U3KQK5 164 aa15.03■□□□□ -0
SOX4-201ENST00000244745 SMAD5-AS1Q9Y6J3 95 aa15.03■□□□□ -0
SOX4-201ENST00000244745 COX7A2LO14548 114 aa15.03■□□□□ -0
SOX4-201ENST00000244745 C14orf132Q9NPU4 83 aa15.02■□□□□ -0
SOX4-201ENST00000244745 ESM1Q9NQ30 184 aa15.02■□□□□ -0
SOX4-201ENST00000244745 RNF185Q96GF1 192 aa15.01□□□□□ -0.01
SOX4-201ENST00000244745 IGLV2-11P01706 119 aa15.01□□□□□ -0.01
SOX4-201ENST00000244745 C4orf3Q8WVX3 66 aa15□□□□□ -0.01
SOX4-201ENST00000244745 DAZAP2Q15038 168 aaPredicted RBP15□□□□□ -0.01
SOX4-201ENST00000244745 IGHV3-30P01768 117 aa15□□□□□ -0.01
SOX4-201ENST00000244745 IGHV3-33P01772 117 aa15□□□□□ -0.01
SOX4-201ENST00000244745 IGHV3-30-5P0DP03 117 aa15□□□□□ -0.01
SOX4-201ENST00000244745 FBXL19-AS1Q494R0 122 aa14.99□□□□□ -0.01
SOX4-201ENST00000244745 PCNX1Q96RV3 2341 aa14.99□□□□□ -0.01
SOX4-201ENST00000244745 JMJD7-PLA2G4BH0Y9G9 81 aa14.99□□□□□ -0.01
SOX4-201ENST00000244745 PRB2P02812 416 aaPredicted RBP14.99□□□□□ -0.01
SOX4-201ENST00000244745 C5orf47Q569G3 176 aa14.99□□□□□ -0.01
SOX4-201ENST00000244745 Q8N976 141 aa14.99□□□□□ -0.01
SOX4-201ENST00000244745 SPATA25Q9BR10 227 aa14.99□□□□□ -0.01
SOX4-201ENST00000244745 LINC00310P59036 64 aa14.99□□□□□ -0.01
SOX4-201ENST00000244745 MIR7-3HGQ8N6C7 128 aa14.99□□□□□ -0.01
SOX4-201ENST00000244745 HHLA3Q9XRX5 114 aa14.99□□□□□ -0.01
SOX4-201ENST00000244745 LY6LH3BQJ8 138 aa14.98□□□□□ -0.01
SOX4-201ENST00000244745 MED12LQ86YW9 2145 aa14.98□□□□□ -0.01
SOX4-201ENST00000244745 RPL18AQ02543 176 aaKnown RBP14.98□□□□□ -0.01
SOX4-201ENST00000244745 IGHV4-28A0A0C4DH34 117 aa14.98□□□□□ -0.01
SOX4-201ENST00000244745 KIAA1549Q9HCM3 1950 aa14.98□□□□□ -0.01
SOX4-201ENST00000244745 TMEM89A2RUT3 159 aa14.97□□□□□ -0.01
SOX4-201ENST00000244745 UQCRQO14949 82 aa14.97□□□□□ -0.01
SOX4-201ENST00000244745 ATG2AQ2TAZ0 1938 aa14.97□□□□□ -0.01
SOX4-201ENST00000244745 C3orf22Q8N5N4 141 aa14.97□□□□□ -0.01
SOX4-201ENST00000244745 RMI2Q96E14 147 aa14.97□□□□□ -0.01
SOX4-201ENST00000244745 CAMK2N2Q96S95 79 aa14.96□□□□□ -0.01
SOX4-201ENST00000244745 SDIM1Q6ZPB5 146 aa14.96□□□□□ -0.01
SOX4-201ENST00000244745 MAP6D1Q9H9H5 199 aa14.96□□□□□ -0.02
SOX4-201ENST00000244745 ZFAND3Q9H8U3 227 aa14.95□□□□□ -0.02
SOX4-201ENST00000244745 LMO4P61968 165 aa14.95□□□□□ -0.02
SOX4-201ENST00000244745 TMEM223A0PJW6 202 aa14.95□□□□□ -0.02
SOX4-201ENST00000244745 C9orf66Q5T8R8 295 aa14.95□□□□□ -0.02
SOX4-201ENST00000244745 TRAV23DV6A0A075B6W5 121 aa14.94□□□□□ -0.02
SOX4-201ENST00000244745 TRIAP1O43715 76 aa14.94□□□□□ -0.02
SOX4-201ENST00000244745 WFDC9Q8NEX5 89 aa14.93□□□□□ -0.02
SOX4-201ENST00000244745 CEP192Q8TEP8 1941 aa14.93□□□□□ -0.02
SOX4-201ENST00000244745 FUSP35637 526 aaKnown RBP eCLIP14.93□□□□□ -0.02
SOX4-201ENST00000244745 BRK1Q8WUW1 75 aa14.93□□□□□ -0.02
SOX4-201ENST00000244745 J3QKU1 62 aa14.92□□□□□ -0.02
SOX4-201ENST00000244745 DEFB4AO15263 64 aa14.92□□□□□ -0.02
SOX4-201ENST00000244745 CACNA1GO43497 2377 aa14.92□□□□□ -0.02
SOX4-201ENST00000244745 MRPS12O15235 138 aaKnown RBP14.92□□□□□ -0.02
SOX4-201ENST00000244745 NREPQ16612 68 aa14.91□□□□□ -0.02
SOX4-201ENST00000244745 CFAP126Q5VTH2 177 aa14.91□□□□□ -0.02
SOX4-201ENST00000244745 TMEM256-PLSCR3K7ERE1 68 aa14.91□□□□□ -0.02
SOX4-201ENST00000244745 TMEM263Q8WUH6 116 aaKnown RBP14.91□□□□□ -0.02
SOX4-201ENST00000244745 CCDC179H3BU77 68 aa14.91□□□□□ -0.02
SOX4-201ENST00000244745 INSL3P51460 131 aa14.91□□□□□ -0.02
SOX4-201ENST00000244745 UPK3BQ9BT76 320 aa14.91□□□□□ -0.02
SOX4-201ENST00000244745 LINC00467Q9BRT7 94 aa14.91□□□□□ -0.02
SOX4-201ENST00000244745 PCNX2A6NKB5 2137 aa14.9□□□□□ -0.02
SOX4-201ENST00000244745 UBE2BP63146 152 aa14.9□□□□□ -0.02
SOX4-201ENST00000244745 RIF1Q5UIP0 2472 aaKnown RBP14.9□□□□□ -0.02
SOX4-201ENST00000244745 CLUHP3Q96NS8 147 aa14.9□□□□□ -0.02
SOX4-201ENST00000244745 CACNA1BQ00975 2339 aa14.9□□□□□ -0.02
SOX4-201ENST00000244745 SPART-AS1P0CW21 52 aa14.9□□□□□ -0.02
SOX4-201ENST00000244745 H3BQ85 93 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms