RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 TNFRSF13BO14836 293 aaPredicted RBP8.34□□□□□ -1.07
CCDC170-201ENST00000239374 C3orf56Q8N813 242 aa8.34□□□□□ -1.07
CCDC170-201ENST00000239374 RS1O15537 224 aa8.34□□□□□ -1.07
CCDC170-201ENST00000239374 IGHV4-38-2P0DP08 117 aa8.34□□□□□ -1.07
CCDC170-201ENST00000239374 PRR9Q5T870 116 aa8.34□□□□□ -1.07
CCDC170-201ENST00000239374 CLUHP3Q96NS8 147 aa8.34□□□□□ -1.07
CCDC170-201ENST00000239374 IGHV3-30-3P0DP02 117 aa8.34□□□□□ -1.07
CCDC170-201ENST00000239374 C6orf226Q5I0X4 101 aa8.33□□□□□ -1.08
CCDC170-201ENST00000239374 CFAP161Q6P656 301 aa8.33□□□□□ -1.08
CCDC170-201ENST00000239374 MAPK1IP1LQ8NDC0 245 aa8.33□□□□□ -1.08
CCDC170-201ENST00000239374 TEX49A0A1B0GTD5 131 aa8.33□□□□□ -1.08
CCDC170-201ENST00000239374 XGP55808 180 aa8.33□□□□□ -1.08
CCDC170-201ENST00000239374 MRGPRG-AS1Q2M3A8 158 aa8.33□□□□□ -1.08
CCDC170-201ENST00000239374 CEMP1Q6PRD7 247 aaPredicted RBP8.33□□□□□ -1.08
CCDC170-201ENST00000239374 ZMAT4Q9H898 229 aa8.33□□□□□ -1.08
CCDC170-201ENST00000239374 PFN2P35080 140 aa8.33□□□□□ -1.08
CCDC170-201ENST00000239374 BAALC-AS2P0C853 105 aa8.32□□□□□ -1.08
CCDC170-201ENST00000239374 PTPRBP23467 1997 aa8.32□□□□□ -1.08
CCDC170-201ENST00000239374 HERVK_113P63121 156 aa8.32□□□□□ -1.08
CCDC170-201ENST00000239374 IGHV4-61A0A0C4DH41 118 aa8.31□□□□□ -1.08
CCDC170-201ENST00000239374 CFHR3Q02985 330 aa8.31□□□□□ -1.08
CCDC170-201ENST00000239374 EBI3Q14213 229 aa8.31□□□□□ -1.08
CCDC170-201ENST00000239374 Q6ZS46 218 aa8.31□□□□□ -1.08
CCDC170-201ENST00000239374 OVOL2Q9BRP0 275 aa8.31□□□□□ -1.08
CCDC170-201ENST00000239374 A0A0J9YXY3 114 aa8.31□□□□□ -1.08
CCDC170-201ENST00000239374 ADORA2A-AS1P86434 159 aa8.31□□□□□ -1.08
CCDC170-201ENST00000239374 CFAP54Q96N23 3096 aa8.31□□□□□ -1.08
CCDC170-201ENST00000239374 IGHV4-59P01825 116 aa8.31□□□□□ -1.08
CCDC170-201ENST00000239374 FAM236AA0A1B0GUQ0 79 aa8.31□□□□□ -1.08
CCDC170-201ENST00000239374 FAM236BA0A1B0GV22 79 aa8.31□□□□□ -1.08
CCDC170-201ENST00000239374 NDUFV3P56181 108 aaKnown RBP8.31□□□□□ -1.08
CCDC170-201ENST00000239374 IGHV3-33P01772 117 aa8.3□□□□□ -1.08
CCDC170-201ENST00000239374 A0A0B4J2C4 111 aa8.3□□□□□ -1.08
CCDC170-201ENST00000239374 H3BT86 120 aa8.3□□□□□ -1.08
CCDC170-201ENST00000239374 RPL35AP18077 110 aaKnown RBP8.3□□□□□ -1.08
CCDC170-201ENST00000239374 MALP21145 153 aa8.3□□□□□ -1.08
CCDC170-201ENST00000239374 HOXD3P31249 432 aaPredicted RBP8.3□□□□□ -1.08
CCDC170-201ENST00000239374 IGHV3-30P01768 117 aa8.3□□□□□ -1.08
CCDC170-201ENST00000239374 IGHV3-30-5P0DP03 117 aa8.3□□□□□ -1.08
CCDC170-201ENST00000239374 IGHV1-58A0A0C4DH39 117 aa8.3□□□□□ -1.08
CCDC170-201ENST00000239374 F8W735 103 aaPredicted RBP8.3□□□□□ -1.08
CCDC170-201ENST00000239374 LGALS9O00182 355 aa8.3□□□□□ -1.08
CCDC170-201ENST00000239374 ZNF22P17026 224 aaPredicted RBP8.29□□□□□ -1.08
CCDC170-201ENST00000239374 LINC01619G3V211 115 aa8.29□□□□□ -1.08
CCDC170-201ENST00000239374 P0DMU3 169 aa8.29□□□□□ -1.08
CCDC170-201ENST00000239374 FAM231AP0DMU4 169 aa8.29□□□□□ -1.08
CCDC170-201ENST00000239374 FAM231CP0DMU5 169 aa8.29□□□□□ -1.08
CCDC170-201ENST00000239374 U3KQE9 123 aa8.29□□□□□ -1.08
CCDC170-201ENST00000239374 IGHV4-4A0A075B6R2 117 aa8.29□□□□□ -1.08
CCDC170-201ENST00000239374 RNASE3P12724 160 aaKnown RBP8.29□□□□□ -1.08
CCDC170-201ENST00000239374 DEFB136Q30KP8 78 aa8.29□□□□□ -1.08
CCDC170-201ENST00000239374 Q8N6K4 173 aa8.29□□□□□ -1.08
CCDC170-201ENST00000239374 CLPSL1A2RUU4 121 aa8.28□□□□□ -1.08
CCDC170-201ENST00000239374 SOCS3O14543 225 aa8.28□□□□□ -1.08
CCDC170-201ENST00000239374 IGHG2P01859 326 aa8.28□□□□□ -1.08
CCDC170-201ENST00000239374 S100A7L2Q5SY68 101 aa8.28□□□□□ -1.08
CCDC170-201ENST00000239374 FBXL19-AS1Q494R0 122 aa8.28□□□□□ -1.08
CCDC170-201ENST00000239374 COX8CQ7Z4L0 72 aa8.28□□□□□ -1.08
CCDC170-201ENST00000239374 TMEM243Q9BU79 118 aa8.28□□□□□ -1.08
CCDC170-201ENST00000239374 RAI1Q7Z5J4 1906 aaPredicted RBP8.28□□□□□ -1.08
CCDC170-201ENST00000239374 PRO3102Q9H379 93 aa8.28□□□□□ -1.08
CCDC170-201ENST00000239374 TRAV13-2A0A0B4J235 113 aa8.28□□□□□ -1.08
CCDC170-201ENST00000239374 A0A0J9YX75 114 aa8.28□□□□□ -1.08
CCDC170-201ENST00000239374 ACYP1P07311 99 aa8.28□□□□□ -1.08
CCDC170-201ENST00000239374 DEFB112Q30KQ8 113 aa8.28□□□□□ -1.08
CCDC170-201ENST00000239374 NFE4Q86UQ8 179 aa8.28□□□□□ -1.08
CCDC170-201ENST00000239374 LINC01356Q8N9X3 169 aa8.28□□□□□ -1.08
CCDC170-201ENST00000239374 TMEM223A0PJW6 202 aa8.27□□□□□ -1.08
CCDC170-201ENST00000239374 TRIAP1O43715 76 aa8.27□□□□□ -1.08
CCDC170-201ENST00000239374 IGLV2-18A0A075B6J9 118 aa8.27□□□□□ -1.09
CCDC170-201ENST00000239374 TINCRA0A1B0GVN0 87 aa8.27□□□□□ -1.09
CCDC170-201ENST00000239374 K7EMT4 169 aa8.27□□□□□ -1.09
CCDC170-201ENST00000239374 DSCR9P59020 149 aa8.27□□□□□ -1.09
CCDC170-201ENST00000239374 LMO4P61968 165 aa8.27□□□□□ -1.09
CCDC170-201ENST00000239374 IGLV4-3A0A075B6K6 122 aa8.26□□□□□ -1.09
CCDC170-201ENST00000239374 HTN3P15516 51 aa8.26□□□□□ -1.09
CCDC170-201ENST00000239374 APRG1Q8IVJ8 170 aa8.26□□□□□ -1.09
CCDC170-201ENST00000239374 DEFB130BP0DP73 79 aa8.26□□□□□ -1.09
CCDC170-201ENST00000239374 DEFB130AP0DP74 79 aa8.26□□□□□ -1.09
CCDC170-201ENST00000239374 LAMTOR3Q9UHA4 124 aa8.26□□□□□ -1.09
CCDC170-201ENST00000239374 TRANK1O15050 2925 aa8.26□□□□□ -1.09
CCDC170-201ENST00000239374 NXPH4O95158 308 aa8.26□□□□□ -1.09
CCDC170-201ENST00000239374 UBE2D1P51668 147 aa8.26□□□□□ -1.09
CCDC170-201ENST00000239374 MIAQ16674 131 aa8.26□□□□□ -1.09
CCDC170-201ENST00000239374 ELANEP08246 267 aa8.26□□□□□ -1.09
CCDC170-201ENST00000239374 POLR2KP53803 58 aaKnown RBP8.26□□□□□ -1.09
CCDC170-201ENST00000239374 TRBV27A0A0K0K1C4 114 aa8.25□□□□□ -1.09
CCDC170-201ENST00000239374 M0QY20 66 aa8.25□□□□□ -1.09
CCDC170-201ENST00000239374 PF4P02776 101 aa8.25□□□□□ -1.09
CCDC170-201ENST00000239374 GATA3P23771 443 aa8.25□□□□□ -1.09
CCDC170-201ENST00000239374 GPHB5Q86YW7 130 aa8.25□□□□□ -1.09
CCDC170-201ENST00000239374 VSIG2Q96IQ7 327 aa8.25□□□□□ -1.09
CCDC170-201ENST00000239374 DNAJC30Q96LL9 226 aa8.25□□□□□ -1.09
CCDC170-201ENST00000239374 TRAV4A0A0B4J268 109 aa8.25□□□□□ -1.09
CCDC170-201ENST00000239374 CDH23Q9H251 3354 aa8.25□□□□□ -1.09
CCDC170-201ENST00000239374 IGHV4OR15-8A0A075B7B6 117 aa8.24□□□□□ -1.09
CCDC170-201ENST00000239374 A0A087WW49 117 aa8.24□□□□□ -1.09
CCDC170-201ENST00000239374 RNF223E7ERA6 249 aa8.24□□□□□ -1.09
CCDC170-201ENST00000239374 SLURP1P55000 103 aa8.24□□□□□ -1.09
CCDC170-201ENST00000239374 NCOR2Q9Y618 2525 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms