RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 IGHV3-53P01767 116 aa10.88□□□□□ -0.67
HDHD3-201ENST00000238379 DEFB135Q30KP9 77 aa10.88□□□□□ -0.67
HDHD3-201ENST00000238379 NEGR1Q7Z3B1 354 aa10.88□□□□□ -0.67
HDHD3-201ENST00000238379 OR4C5Q8NGB2 326 aa10.88□□□□□ -0.67
HDHD3-201ENST00000238379 ZMAT5Q9UDW3 170 aaKnown RBP10.88□□□□□ -0.67
HDHD3-201ENST00000238379 TRBV27A0A0K0K1C4 114 aa10.88□□□□□ -0.67
HDHD3-201ENST00000238379 G3V4G9 280 aa10.88□□□□□ -0.67
HDHD3-201ENST00000238379 SYS1-DBNDD2H3BUS1 97 aa10.88□□□□□ -0.67
HDHD3-201ENST00000238379 VCYO14598 125 aa10.88□□□□□ -0.67
HDHD3-201ENST00000238379 P0DMU3 169 aa10.88□□□□□ -0.67
HDHD3-201ENST00000238379 FAM231AP0DMU4 169 aa10.88□□□□□ -0.67
HDHD3-201ENST00000238379 FAM231CP0DMU5 169 aa10.88□□□□□ -0.67
HDHD3-201ENST00000238379 SPATA12Q7Z6I5 190 aa10.88□□□□□ -0.67
HDHD3-201ENST00000238379 ZNF479Q96JC4 524 aa10.88□□□□□ -0.67
HDHD3-201ENST00000238379 TRAV4A0A0B4J268 109 aa10.87□□□□□ -0.67
HDHD3-201ENST00000238379 MDFIQ99750 246 aa10.87□□□□□ -0.67
HDHD3-201ENST00000238379 MAP1LC3CQ9BXW4 147 aa10.87□□□□□ -0.67
HDHD3-201ENST00000238379 Q9UF83 564 aa10.87□□□□□ -0.67
HDHD3-201ENST00000238379 GAGE12BA1L429 117 aa10.86□□□□□ -0.67
HDHD3-201ENST00000238379 GAGE7O76087 117 aa10.86□□□□□ -0.67
HDHD3-201ENST00000238379 GAGE12FP0CL80 117 aa10.86□□□□□ -0.67
HDHD3-201ENST00000238379 GAGE12GP0CL81 117 aa10.86□□□□□ -0.67
HDHD3-201ENST00000238379 GAGE12IP0CL82 117 aa10.86□□□□□ -0.67
HDHD3-201ENST00000238379 ORMDL2Q53FV1 153 aa10.86□□□□□ -0.67
HDHD3-201ENST00000238379 A8MZ25 164 aa10.86□□□□□ -0.67
HDHD3-201ENST00000238379 EMP1P54849 157 aa10.86□□□□□ -0.67
HDHD3-201ENST00000238379 SAMD5Q5TGI4 173 aa10.86□□□□□ -0.67
HDHD3-201ENST00000238379 NUDT3O95989 172 aa10.85□□□□□ -0.67
HDHD3-201ENST00000238379 TEX43Q6ZNM6 134 aa10.85□□□□□ -0.67
HDHD3-201ENST00000238379 KIR2DL4Q99706 377 aa10.85□□□□□ -0.67
HDHD3-201ENST00000238379 PET117Q6UWS5 81 aa10.84□□□□□ -0.67
HDHD3-201ENST00000238379 OR11H2Q8NH07 326 aa10.84□□□□□ -0.67
HDHD3-201ENST00000238379 IFI27L1Q96BM0 104 aa10.84□□□□□ -0.67
HDHD3-201ENST00000238379 RNF183Q96D59 192 aa10.84□□□□□ -0.67
HDHD3-201ENST00000238379 TRGV2A0A075B6R0 118 aa10.84□□□□□ -0.67
HDHD3-201ENST00000238379 S100A12P80511 92 aa10.84□□□□□ -0.67
HDHD3-201ENST00000238379 LINC00612Q8N6U2 182 aa10.84□□□□□ -0.67
HDHD3-201ENST00000238379 NEXN-AS1Q8NBZ9 246 aa10.84□□□□□ -0.67
HDHD3-201ENST00000238379 DEFB104AQ8WTQ1 72 aa10.84□□□□□ -0.67
HDHD3-201ENST00000238379 C18orf15Q96N68 181 aa10.84□□□□□ -0.67
HDHD3-201ENST00000238379 TNFRSF18Q9Y5U5 241 aa10.83□□□□□ -0.68
HDHD3-201ENST00000238379 NOTCH1P46531 2555 aa10.83□□□□□ -0.68
HDHD3-201ENST00000238379 I3L3M4 83 aa10.82□□□□□ -0.68
HDHD3-201ENST00000238379 CIDEAO60543 219 aa10.82□□□□□ -0.68
HDHD3-201ENST00000238379 TOMM6Q96B49 74 aa10.82□□□□□ -0.68
HDHD3-201ENST00000238379 DNAJC30Q96LL9 226 aa10.82□□□□□ -0.68
HDHD3-201ENST00000238379 IGHV4-28A0A0C4DH34 117 aa10.81□□□□□ -0.68
HDHD3-201ENST00000238379 H0Y8G0 127 aa10.81□□□□□ -0.68
HDHD3-201ENST00000238379 TSHBP01222 138 aa10.81□□□□□ -0.68
HDHD3-201ENST00000238379 LINC01545Q5VT33 79 aa10.81□□□□□ -0.68
HDHD3-201ENST00000238379 ZNF664Q8N3J9 261 aa10.81□□□□□ -0.68
HDHD3-201ENST00000238379 ATP5LO75964 103 aa10.81□□□□□ -0.68
HDHD3-201ENST00000238379 C2orf66Q6UXQ4 117 aa10.81□□□□□ -0.68
HDHD3-201ENST00000238379 Q8NAQ8 132 aa10.81□□□□□ -0.68
HDHD3-201ENST00000238379 NBEAL1Q6ZS30 2694 aa10.8□□□□□ -0.68
HDHD3-201ENST00000238379 C20orf202A1L168 122 aa10.8□□□□□ -0.68
HDHD3-201ENST00000238379 PCP4L1A6NKN8 68 aa10.8□□□□□ -0.68
HDHD3-201ENST00000238379 DEFB130BP0DP73 79 aa10.8□□□□□ -0.68
HDHD3-201ENST00000238379 DEFB130AP0DP74 79 aa10.8□□□□□ -0.68
HDHD3-201ENST00000238379 MIFP14174 115 aa10.8□□□□□ -0.68
HDHD3-201ENST00000238379 RIPPLY3P57055 190 aa10.8□□□□□ -0.68
HDHD3-201ENST00000238379 ATOH7Q8N100 152 aa10.8□□□□□ -0.68
HDHD3-201ENST00000238379 SLC25A29Q8N8R3 303 aa10.8□□□□□ -0.68
HDHD3-201ENST00000238379 TRBV10-1A0A0K0K1A3 114 aa10.79□□□□□ -0.68
HDHD3-201ENST00000238379 LYRM9A8MSI8 78 aa10.79□□□□□ -0.68
HDHD3-201ENST00000238379 K7EQD1 137 aa10.79□□□□□ -0.68
HDHD3-201ENST00000238379 G0S2P27469 103 aa10.79□□□□□ -0.68
HDHD3-201ENST00000238379 RHOHQ15669 191 aa10.79□□□□□ -0.68
HDHD3-201ENST00000238379 CMYA5Q8N3K9 4069 aa10.79□□□□□ -0.68
HDHD3-201ENST00000238379 DEFB4AO15263 64 aa10.79□□□□□ -0.68
HDHD3-201ENST00000238379 FHL2Q14192 279 aa10.79□□□□□ -0.68
HDHD3-201ENST00000238379 FAM222AQ5U5X8 452 aa10.79□□□□□ -0.68
HDHD3-201ENST00000238379 SCGB3A1Q96QR1 104 aa10.79□□□□□ -0.68
HDHD3-201ENST00000238379 VAMP8Q9BV40 100 aa10.79□□□□□ -0.68
HDHD3-201ENST00000238379 CYSLTR1Q9Y271 337 aa10.79□□□□□ -0.68
HDHD3-201ENST00000238379 TRBV6-4A0A1B0GX49 114 aa10.78□□□□□ -0.68
HDHD3-201ENST00000238379 LGALS9CQ6DKI2 356 aa10.78□□□□□ -0.68
HDHD3-201ENST00000238379 PMCHL2Q9BQD1 86 aa10.78□□□□□ -0.68
HDHD3-201ENST00000238379 DKK2Q9UBU2 259 aa10.78□□□□□ -0.68
HDHD3-201ENST00000238379 MGAM2Q2M2H8 2515 aa10.78□□□□□ -0.68
HDHD3-201ENST00000238379 ANK2Q01484 3957 aa10.78□□□□□ -0.68
HDHD3-201ENST00000238379 TRBV7-3A0A075B6L6 115 aa10.77□□□□□ -0.68
HDHD3-201ENST00000238379 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.77□□□□□ -0.68
HDHD3-201ENST00000238379 ERASQ7Z444 233 aa10.77□□□□□ -0.68
HDHD3-201ENST00000238379 ZNRF2Q8NHG8 242 aa10.77□□□□□ -0.68
HDHD3-201ENST00000238379 PRO1933Q9H354 126 aa10.77□□□□□ -0.68
HDHD3-201ENST00000238379 TP53TG1Q9Y2A0 90 aa10.77□□□□□ -0.68
HDHD3-201ENST00000238379 TRGV4A0A0C4DH28 118 aa10.77□□□□□ -0.69
HDHD3-201ENST00000238379 LINC01549A6NIU2 74 aa10.77□□□□□ -0.69
HDHD3-201ENST00000238379 PRSS1P07477 247 aa10.77□□□□□ -0.69
HDHD3-201ENST00000238379 RPL39P62891 51 aaKnown RBP10.77□□□□□ -0.69
HDHD3-201ENST00000238379 ZMAT4Q9H898 229 aa10.77□□□□□ -0.69
HDHD3-201ENST00000238379 PAM16Q9Y3D7 125 aa10.77□□□□□ -0.69
HDHD3-201ENST00000238379 IGIPA6NJ69 53 aa10.76□□□□□ -0.69
HDHD3-201ENST00000238379 PKIAP61925 76 aa10.76□□□□□ -0.69
HDHD3-201ENST00000238379 RPL36AP83881 106 aaKnown RBP10.76□□□□□ -0.69
HDHD3-201ENST00000238379 MAJINQ3KP22 176 aa10.76□□□□□ -0.69
HDHD3-201ENST00000238379 C20orf203Q8NBC4 194 aa10.76□□□□□ -0.69
HDHD3-201ENST00000238379 RPL36ALQ969Q0 106 aaKnown RBP10.76□□□□□ -0.69
HDHD3-201ENST00000238379 TRAV9-2A0A087WT02 112 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 332 ms