RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 KCNIP4Q6PIL6 250 aa9.45□□□□□ -0.9
GPN3-201ENST00000228827 FER1L6-AS1Q8NA97 138 aa9.45□□□□□ -0.9
GPN3-201ENST00000228827 NTN5Q8WTR8 489 aaPredicted RBP9.45□□□□□ -0.9
GPN3-201ENST00000228827 AP1S3Q96PC3 154 aa9.45□□□□□ -0.9
GPN3-201ENST00000228827 TMEM262E9PQX1 116 aa9.44□□□□□ -0.9
GPN3-201ENST00000228827 P01737 135 aa9.44□□□□□ -0.9
GPN3-201ENST00000228827 MGPP08493 103 aa9.44□□□□□ -0.9
GPN3-201ENST00000228827 IGLC6P0CF74 106 aa9.44□□□□□ -0.9
GPN3-201ENST00000228827 RPS20P60866 119 aaKnown RBP9.44□□□□□ -0.9
GPN3-201ENST00000228827 HAMPP81172 84 aa9.44□□□□□ -0.9
GPN3-201ENST00000228827 KIF25-AS1Q9Y6Z4 181 aa9.44□□□□□ -0.9
GPN3-201ENST00000228827 IGKV2D-24A0A075B6R9 120 aa9.43□□□□□ -0.9
GPN3-201ENST00000228827 TRBV6-8A0A0A6YYG3 113 aa9.43□□□□□ -0.9
GPN3-201ENST00000228827 ALKAL2Q6UX46 152 aa9.43□□□□□ -0.9
GPN3-201ENST00000228827 UBE2WQ96B02 151 aa9.43□□□□□ -0.9
GPN3-201ENST00000228827 SMIM12Q96EX1 92 aa9.43□□□□□ -0.9
GPN3-201ENST00000228827 BAALCQ8WXS3 180 aa9.42□□□□□ -0.9
GPN3-201ENST00000228827 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.41□□□□□ -0.9
GPN3-201ENST00000228827 XKRY2A2RUG3 117 aa9.41□□□□□ -0.9
GPN3-201ENST00000228827 EPM2AB3EWF7 344 aa9.41□□□□□ -0.9
GPN3-201ENST00000228827 SMR3BP02814 79 aaPredicted RBP9.41□□□□□ -0.9
GPN3-201ENST00000228827 LYZL1Q6UWQ5 148 aa9.41□□□□□ -0.9
GPN3-201ENST00000228827 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.41□□□□□ -0.9
GPN3-201ENST00000228827 RMI2Q96E14 147 aa9.41□□□□□ -0.9
GPN3-201ENST00000228827 CHCHD7Q9BUK0 85 aa9.41□□□□□ -0.9
GPN3-201ENST00000228827 BIN3Q9NQY0 253 aa9.41□□□□□ -0.9
GPN3-201ENST00000228827 COX11Q9Y6N1 276 aa9.41□□□□□ -0.9
GPN3-201ENST00000228827 TAGLN2P37802 199 aaKnown RBP9.4□□□□□ -0.9
GPN3-201ENST00000228827 CACNG7P62955 275 aa9.4□□□□□ -0.9
GPN3-201ENST00000228827 ELOBQ15370 118 aa9.4□□□□□ -0.9
GPN3-201ENST00000228827 NUDT10Q8NFP7 164 aa9.4□□□□□ -0.9
GPN3-201ENST00000228827 NUDT11Q96G61 164 aa9.4□□□□□ -0.9
GPN3-201ENST00000228827 CHCHD5Q9BSY4 110 aa9.4□□□□□ -0.9
GPN3-201ENST00000228827 FAT1Q14517 4588 aa9.4□□□□□ -0.9
GPN3-201ENST00000228827 MPV17L2Q567V2 206 aa9.4□□□□□ -0.91
GPN3-201ENST00000228827 SUMO4Q6EEV6 95 aa9.4□□□□□ -0.91
GPN3-201ENST00000228827 C15orf54Q8N8G6 183 aa9.4□□□□□ -0.91
GPN3-201ENST00000228827 F2Z2F3 143 aa9.39□□□□□ -0.91
GPN3-201ENST00000228827 K7EN84 100 aa9.39□□□□□ -0.91
GPN3-201ENST00000228827 NKX2-5P52952 324 aaPredicted RBP9.39□□□□□ -0.91
GPN3-201ENST00000228827 BLOC1S1P78537 153 aa9.39□□□□□ -0.91
GPN3-201ENST00000228827 NTM-AS1Q6ZSK4 140 aa9.39□□□□□ -0.91
GPN3-201ENST00000228827 OCC1Q8TAD7 63 aa9.39□□□□□ -0.91
GPN3-201ENST00000228827 RNASE7Q9H1E1 156 aaKnown RBP9.39□□□□□ -0.91
GPN3-201ENST00000228827 M0QY20 66 aa9.38□□□□□ -0.91
GPN3-201ENST00000228827 CRPP02741 224 aa9.38□□□□□ -0.91
GPN3-201ENST00000228827 ANGP03950 147 aaKnown RBP9.38□□□□□ -0.91
GPN3-201ENST00000228827 NTF3P20783 257 aa9.38□□□□□ -0.91
GPN3-201ENST00000228827 CEBPGP53567 150 aa9.38□□□□□ -0.91
GPN3-201ENST00000228827 GAGE6Q13070 117 aa9.38□□□□□ -0.91
GPN3-201ENST00000228827 Q5VSD8 79 aa9.38□□□□□ -0.91
GPN3-201ENST00000228827 Q8N976 141 aa9.38□□□□□ -0.91
GPN3-201ENST00000228827 RPP21Q9H633 154 aaKnown RBP9.38□□□□□ -0.91
GPN3-201ENST00000228827 FAM30AQ9NZY2 134 aa9.38□□□□□ -0.91
GPN3-201ENST00000228827 DNAH8Q96JB1 4490 aa9.37□□□□□ -0.91
GPN3-201ENST00000228827 H7C1H1 209 aa9.37□□□□□ -0.91
GPN3-201ENST00000228827 TRGC1P0CF51 173 aa9.37□□□□□ -0.91
GPN3-201ENST00000228827 Q0VG73 95 aa9.37□□□□□ -0.91
GPN3-201ENST00000228827 TMEM97Q5BJF2 176 aa9.37□□□□□ -0.91
GPN3-201ENST00000228827 ENHOQ6UWT2 76 aa9.37□□□□□ -0.91
GPN3-201ENST00000228827 FRZBQ92765 325 aa9.37□□□□□ -0.91
GPN3-201ENST00000228827 TMEM70Q9BUB7 260 aa9.37□□□□□ -0.91
GPN3-201ENST00000228827 TRBV25-1A0A075B6N4 114 aa9.36□□□□□ -0.91
GPN3-201ENST00000228827 TWIST1Q15672 202 aa9.36□□□□□ -0.91
GPN3-201ENST00000228827 LINC01620Q4KN68 170 aa9.36□□□□□ -0.91
GPN3-201ENST00000228827 ATRAIDQ6UW56 229 aa9.36□□□□□ -0.91
GPN3-201ENST00000228827 DEFB104AQ8WTQ1 72 aa9.36□□□□□ -0.91
GPN3-201ENST00000228827 C1orf43Q9BWL3 253 aa9.36□□□□□ -0.91
GPN3-201ENST00000228827 DPH3P1Q9H4G8 78 aa9.36□□□□□ -0.91
GPN3-201ENST00000228827 CTRLP40313 264 aa9.35□□□□□ -0.91
GPN3-201ENST00000228827 PKIAP61925 76 aa9.35□□□□□ -0.91
GPN3-201ENST00000228827 RASL11AQ6T310 242 aa9.35□□□□□ -0.91
GPN3-201ENST00000228827 CLPSL2Q6UWE3 100 aa9.35□□□□□ -0.91
GPN3-201ENST00000228827 IGHV1-24A0A0C4DH33 117 aa9.34□□□□□ -0.91
GPN3-201ENST00000228827 TMEM250H0YL14 139 aa9.34□□□□□ -0.91
GPN3-201ENST00000228827 RBX1P62877 108 aa9.34□□□□□ -0.91
GPN3-201ENST00000228827 LYPD6BQ8NI32 183 aa9.34□□□□□ -0.91
GPN3-201ENST00000228827 INAFM2P0DMQ5 153 aa9.34□□□□□ -0.91
GPN3-201ENST00000228827 IQCJQ1A5X6 159 aa9.34□□□□□ -0.91
GPN3-201ENST00000228827 GATCO43716 136 aaKnown RBP9.33□□□□□ -0.92
GPN3-201ENST00000228827 HLA-DQA1P01909 254 aa9.33□□□□□ -0.92
GPN3-201ENST00000228827 WDR73Q6P4I2 378 aa9.33□□□□□ -0.92
GPN3-201ENST00000228827 LINC00269Q8N2A0 174 aa9.33□□□□□ -0.92
GPN3-201ENST00000228827 GTSF1Q8WW33 167 aa9.33□□□□□ -0.92
GPN3-201ENST00000228827 EIF5A2Q9GZV4 153 aaKnown RBP9.33□□□□□ -0.92
GPN3-201ENST00000228827 NIT2Q9NQR4 276 aa9.33□□□□□ -0.92
GPN3-201ENST00000228827 TRAV26-2A0A0B4J265 109 aa9.32□□□□□ -0.92
GPN3-201ENST00000228827 FAM229AH3BQW9 127 aa9.32□□□□□ -0.92
GPN3-201ENST00000228827 FOXA3P55318 350 aaPredicted RBP9.31□□□□□ -0.92
GPN3-201ENST00000228827 MIAQ16674 131 aa9.31□□□□□ -0.92
GPN3-201ENST00000228827 PGLYRP4Q96LB8 373 aa9.31□□□□□ -0.92
GPN3-201ENST00000228827 TMEM243Q9BU79 118 aa9.31□□□□□ -0.92
GPN3-201ENST00000228827 CNFNQ9BYD5 112 aa9.31□□□□□ -0.92
GPN3-201ENST00000228827 FAM231DQ6ZW35 169 aa9.3□□□□□ -0.92
GPN3-201ENST00000228827 GATD1Q8NB37 220 aa9.3□□□□□ -0.92
GPN3-201ENST00000228827 SMIM7Q9BQ49 75 aa9.3□□□□□ -0.92
GPN3-201ENST00000228827 USP17L23D6RBM5 183 aa9.29□□□□□ -0.92
GPN3-201ENST00000228827 Q6ZSA8 131 aa9.29□□□□□ -0.92
GPN3-201ENST00000228827 SMIM15Q7Z3B0 74 aa9.29□□□□□ -0.92
GPN3-201ENST00000228827 FAM210AQ96ND0 272 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms