RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 TRAV4A0A0B4J268 109 aa7.27□□□□□ -1.25
TUBB1-201ENST00000217133 IGHV3-11P01762 117 aa7.27□□□□□ -1.25
TUBB1-201ENST00000217133 LINC01620Q4KN68 170 aa7.27□□□□□ -1.25
TUBB1-201ENST00000217133 AJUBAQ96IF1 538 aa7.27□□□□□ -1.25
TUBB1-201ENST00000217133 OPRPNQ99935 248 aaPredicted RBP7.27□□□□□ -1.25
TUBB1-201ENST00000217133 IGHV4OR15-8A0A075B7B6 117 aa7.26□□□□□ -1.25
TUBB1-201ENST00000217133 A0A087WW49 117 aa7.26□□□□□ -1.25
TUBB1-201ENST00000217133 GAGE12JA6NER3 117 aa7.26□□□□□ -1.25
TUBB1-201ENST00000217133 GAGE7O76087 117 aa7.26□□□□□ -1.25
TUBB1-201ENST00000217133 GAGE12FP0CL80 117 aa7.26□□□□□ -1.25
TUBB1-201ENST00000217133 GAGE12GP0CL81 117 aa7.26□□□□□ -1.25
TUBB1-201ENST00000217133 GAGE12IP0CL82 117 aa7.26□□□□□ -1.25
TUBB1-201ENST00000217133 UBE2E1P51965 193 aa7.26□□□□□ -1.25
TUBB1-201ENST00000217133 GAGE4Q13068 117 aa7.26□□□□□ -1.25
TUBB1-201ENST00000217133 FBN2P35556 2912 aa7.26□□□□□ -1.25
TUBB1-201ENST00000217133 RHODO00212 210 aa7.26□□□□□ -1.25
TUBB1-201ENST00000217133 LEPROTO15243 131 aa7.26□□□□□ -1.25
TUBB1-201ENST00000217133 IFITM1P13164 125 aa7.26□□□□□ -1.25
TUBB1-201ENST00000217133 SRD5A1P18405 259 aa7.26□□□□□ -1.25
TUBB1-201ENST00000217133 NDUFV3P56181 108 aaKnown RBP7.26□□□□□ -1.25
TUBB1-201ENST00000217133 CITED1Q99966 193 aa7.26□□□□□ -1.25
TUBB1-201ENST00000217133 RPL32P62910 135 aaKnown RBP7.26□□□□□ -1.25
TUBB1-201ENST00000217133 SIRPDQ9H106 197 aa7.26□□□□□ -1.25
TUBB1-201ENST00000217133 A0A1W2PPR1 153 aa7.25□□□□□ -1.25
TUBB1-201ENST00000217133 FAM223BA6NKX1 122 aa7.25□□□□□ -1.25
TUBB1-201ENST00000217133 TRBV12-3P01733 135 aa7.25□□□□□ -1.25
TUBB1-201ENST00000217133 FAM223AQ8IWN6 122 aa7.25□□□□□ -1.25
TUBB1-201ENST00000217133 TMEM263Q8WUH6 116 aaKnown RBP7.25□□□□□ -1.25
TUBB1-201ENST00000217133 TRAV12-3A0A0B4J271 114 aa7.25□□□□□ -1.25
TUBB1-201ENST00000217133 A0A0B4J2C4 111 aa7.25□□□□□ -1.25
TUBB1-201ENST00000217133 TEX49A0A1B0GTD5 131 aa7.25□□□□□ -1.25
TUBB1-201ENST00000217133 C15orf53Q8NAA6 179 aa7.25□□□□□ -1.25
TUBB1-201ENST00000217133 IGHV3OR16-10A0A075B7F0 116 aa7.25□□□□□ -1.25
TUBB1-201ENST00000217133 H3BMM0 161 aa7.25□□□□□ -1.25
TUBB1-201ENST00000217133 CRLF1O75462 422 aa7.25□□□□□ -1.25
TUBB1-201ENST00000217133 P0DMU3 169 aa7.25□□□□□ -1.25
TUBB1-201ENST00000217133 FAM231AP0DMU4 169 aa7.25□□□□□ -1.25
TUBB1-201ENST00000217133 FAM231CP0DMU5 169 aa7.25□□□□□ -1.25
TUBB1-201ENST00000217133 LINC00315P59091 139 aa7.25□□□□□ -1.25
TUBB1-201ENST00000217133 C2orf82Q6UX34 121 aa7.25□□□□□ -1.25
TUBB1-201ENST00000217133 UBE2WQ96B02 151 aa7.25□□□□□ -1.25
TUBB1-201ENST00000217133 KIF25-AS1Q9Y6Z4 181 aa7.25□□□□□ -1.25
TUBB1-201ENST00000217133 CCDC168Q8NDH2 2452 aa7.24□□□□□ -1.25
TUBB1-201ENST00000217133 ADARB2-AS1A8MUL3 147 aa7.24□□□□□ -1.25
TUBB1-201ENST00000217133 AMELXQ99217 191 aa7.24□□□□□ -1.25
TUBB1-201ENST00000217133 CELSR1Q9NYQ6 3014 aa7.24□□□□□ -1.25
TUBB1-201ENST00000217133 A0A0J9YXV3 536 aa7.24□□□□□ -1.25
TUBB1-201ENST00000217133 TMEM223A0PJW6 202 aa7.24□□□□□ -1.25
TUBB1-201ENST00000217133 M0R2P5 195 aa7.24□□□□□ -1.25
TUBB1-201ENST00000217133 NDUFA4O00483 81 aa7.24□□□□□ -1.25
TUBB1-201ENST00000217133 COX6CP09669 75 aa7.24□□□□□ -1.25
TUBB1-201ENST00000217133 C5orf56Q8N8D9 126 aa7.24□□□□□ -1.25
TUBB1-201ENST00000217133 RHPN1-AS1Q9BWJ2 59 aa7.24□□□□□ -1.25
TUBB1-201ENST00000217133 NBPF19A0A087WUL8 3843 aa7.24□□□□□ -1.25
TUBB1-201ENST00000217133 HIST2H2BCQ6DN03 193 aa7.24□□□□□ -1.25
TUBB1-201ENST00000217133 SPXQ9BT56 116 aa7.24□□□□□ -1.25
TUBB1-201ENST00000217133 TRBV27A0A0K0K1C4 114 aa7.23□□□□□ -1.25
TUBB1-201ENST00000217133 NPFFO15130 113 aa7.23□□□□□ -1.25
TUBB1-201ENST00000217133 IGKV3-20P01619 116 aa7.23□□□□□ -1.25
TUBB1-201ENST00000217133 NHLRC4P0CG21 123 aaPredicted RBP7.23□□□□□ -1.25
TUBB1-201ENST00000217133 PF4V1P10720 104 aa7.23□□□□□ -1.25
TUBB1-201ENST00000217133 TRBV10-2A0A0K0K1G8 114 aa7.23□□□□□ -1.25
TUBB1-201ENST00000217133 CCDC179H3BU77 68 aa7.23□□□□□ -1.25
TUBB1-201ENST00000217133 SOCS3O14543 225 aa7.23□□□□□ -1.25
TUBB1-201ENST00000217133 KLK9Q2XQG4 91 aa7.23□□□□□ -1.25
TUBB1-201ENST00000217133 KLK9Q9UKQ9 250 aa7.23□□□□□ -1.25
TUBB1-201ENST00000217133 MOB4Q9Y3A3 225 aa7.23□□□□□ -1.25
TUBB1-201ENST00000217133 M0QXV9 152 aa7.22□□□□□ -1.25
TUBB1-201ENST00000217133 NXPH4O95158 308 aa7.22□□□□□ -1.25
TUBB1-201ENST00000217133 ELANEP08246 267 aa7.22□□□□□ -1.25
TUBB1-201ENST00000217133 ZNF22P17026 224 aaPredicted RBP7.22□□□□□ -1.25
TUBB1-201ENST00000217133 UBTD1Q9HAC8 227 aa7.22□□□□□ -1.25
TUBB1-201ENST00000217133 FLNBO75369 2602 aaKnown RBP7.22□□□□□ -1.25
TUBB1-201ENST00000217133 IGHV1-69P01742 117 aa7.22□□□□□ -1.25
TUBB1-201ENST00000217133 ID1P41134 155 aa7.22□□□□□ -1.25
TUBB1-201ENST00000217133 POM121L12Q8N7R1 296 aa7.22□□□□□ -1.25
TUBB1-201ENST00000217133 MUC4Q99102 2169 aa7.22□□□□□ -1.25
TUBB1-201ENST00000217133 TRIAP1O43715 76 aa7.22□□□□□ -1.25
TUBB1-201ENST00000217133 EIF4EBP3O60516 100 aaPredicted RBP7.22□□□□□ -1.25
TUBB1-201ENST00000217133 NPC2P61916 151 aa7.22□□□□□ -1.25
TUBB1-201ENST00000217133 RHOHQ15669 191 aa7.22□□□□□ -1.25
TUBB1-201ENST00000217133 NRGNQ92686 78 aa7.22□□□□□ -1.25
TUBB1-201ENST00000217133 NAV2Q8IVL1 2488 aa7.21□□□□□ -1.25
TUBB1-201ENST00000217133 TRBV7-9A0A0J9YWB2 115 aa7.21□□□□□ -1.25
TUBB1-201ENST00000217133 A0A0J9YXY3 114 aa7.21□□□□□ -1.25
TUBB1-201ENST00000217133 FBXL19-AS1Q494R0 122 aa7.21□□□□□ -1.25
TUBB1-201ENST00000217133 TIMM21Q9BVV7 248 aa7.21□□□□□ -1.25
TUBB1-201ENST00000217133 FAM19A4Q96LR4 140 aa7.21□□□□□ -1.26
TUBB1-201ENST00000217133 CREBBPQ92793 2442 aa7.21□□□□□ -1.26
TUBB1-201ENST00000217133 TRBV6-5A0A0K0K1A5 114 aa7.21□□□□□ -1.26
TUBB1-201ENST00000217133 LGALS9O00182 355 aa7.21□□□□□ -1.26
TUBB1-201ENST00000217133 LY6EQ16553 131 aa7.21□□□□□ -1.26
TUBB1-201ENST00000217133 APRG1Q8IVJ8 170 aa7.21□□□□□ -1.26
TUBB1-201ENST00000217133 C20orf203Q8NBC4 194 aa7.21□□□□□ -1.26
TUBB1-201ENST00000217133 ZNF580Q9UK33 172 aa7.21□□□□□ -1.26
TUBB1-201ENST00000217133 TRBV30A0A0K0K1B3 111 aa7.2□□□□□ -1.26
TUBB1-201ENST00000217133 CD28P10747 220 aa7.2□□□□□ -1.26
TUBB1-201ENST00000217133 C11orf71Q6IPW1 123 aa7.2□□□□□ -1.26
TUBB1-201ENST00000217133 SMIM20Q8N5G0 67 aa7.2□□□□□ -1.26
TUBB1-201ENST00000217133 KLLNB2CW77 178 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms