RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 NFE4Q86UQ8 179 aa6.74□□□□□ -1.33
MTHFD1-201ENST00000216605 U3KQK5 164 aa6.74□□□□□ -1.33
MTHFD1-201ENST00000216605 IGHV4OR15-8A0A075B7B6 117 aa6.73□□□□□ -1.33
MTHFD1-201ENST00000216605 A0A087WW49 117 aa6.73□□□□□ -1.33
MTHFD1-201ENST00000216605 A0A087WWL8 130 aa6.73□□□□□ -1.33
MTHFD1-201ENST00000216605 CRYGDP07320 174 aa6.73□□□□□ -1.33
MTHFD1-201ENST00000216605 CKS2P33552 79 aa6.73□□□□□ -1.33
MTHFD1-201ENST00000216605 ASIPP42127 132 aa6.73□□□□□ -1.33
MTHFD1-201ENST00000216605 AMTNQ6UX39 209 aa6.73□□□□□ -1.33
MTHFD1-201ENST00000216605 C18orf15Q96N68 181 aa6.73□□□□□ -1.33
MTHFD1-201ENST00000216605 WNK1Q9H4A3 2382 aa6.73□□□□□ -1.33
MTHFD1-201ENST00000216605 PCP2Q8IVA1 136 aa6.73□□□□□ -1.33
MTHFD1-201ENST00000216605 AMN1Q8IY45 258 aa6.73□□□□□ -1.33
MTHFD1-201ENST00000216605 C20orf173Q96LM9 149 aa6.73□□□□□ -1.33
MTHFD1-201ENST00000216605 LINC00477Q96M19 166 aa6.73□□□□□ -1.33
MTHFD1-201ENST00000216605 IGLL5B9A064 214 aa6.72□□□□□ -1.33
MTHFD1-201ENST00000216605 LGALS1P09382 135 aaKnown RBP6.72□□□□□ -1.33
MTHFD1-201ENST00000216605 TRAV4A0A0B4J268 109 aa6.72□□□□□ -1.33
MTHFD1-201ENST00000216605 RBAKDNA6NC62 111 aa6.72□□□□□ -1.33
MTHFD1-201ENST00000216605 ATP5LO75964 103 aa6.72□□□□□ -1.33
MTHFD1-201ENST00000216605 S100A4P26447 101 aaKnown RBP6.72□□□□□ -1.33
MTHFD1-201ENST00000216605 HOXD3P31249 432 aaPredicted RBP6.72□□□□□ -1.33
MTHFD1-201ENST00000216605 HERVK_113P63121 156 aa6.72□□□□□ -1.33
MTHFD1-201ENST00000216605 C9orf153Q5TBE3 101 aa6.72□□□□□ -1.33
MTHFD1-201ENST00000216605 HRCT1Q6UXD1 115 aa6.72□□□□□ -1.33
MTHFD1-201ENST00000216605 GPHB5Q86YW7 130 aa6.72□□□□□ -1.33
MTHFD1-201ENST00000216605 C10orf126Q8N4M7 172 aa6.72□□□□□ -1.33
MTHFD1-201ENST00000216605 HIVEP2P31629 2446 aa6.72□□□□□ -1.33
MTHFD1-201ENST00000216605 DNAJC9-AS1A6NH13 148 aa6.72□□□□□ -1.33
MTHFD1-201ENST00000216605 OVOL1O14753 267 aa6.72□□□□□ -1.33
MTHFD1-201ENST00000216605 MRPL51Q4U2R6 128 aaKnown RBP6.72□□□□□ -1.33
MTHFD1-201ENST00000216605 KLHL30-AS1Q8NEE0 82 aa6.72□□□□□ -1.33
MTHFD1-201ENST00000216605 PHLDA1Q8WV24 401 aaPredicted RBP6.72□□□□□ -1.33
MTHFD1-201ENST00000216605 UBE2E2Q96LR5 201 aa6.72□□□□□ -1.33
MTHFD1-201ENST00000216605 HIGD1BQ9P298 99 aa6.72□□□□□ -1.33
MTHFD1-201ENST00000216605 ITPR2Q14571 2701 aa6.71□□□□□ -1.33
MTHFD1-201ENST00000216605 SPRY2O43597 315 aa6.71□□□□□ -1.34
MTHFD1-201ENST00000216605 RNASE4P34096 147 aaKnown RBP6.71□□□□□ -1.34
MTHFD1-201ENST00000216605 SLURP1P55000 103 aa6.71□□□□□ -1.34
MTHFD1-201ENST00000216605 FXYD7P58549 80 aa6.71□□□□□ -1.34
MTHFD1-201ENST00000216605 C18orf65Q6ZTR6 163 aa6.71□□□□□ -1.34
MTHFD1-201ENST00000216605 TEN1Q86WV5 123 aa6.71□□□□□ -1.34
MTHFD1-201ENST00000216605 K7ERJ3 54 aa6.71□□□□□ -1.34
MTHFD1-201ENST00000216605 RPL35AP18077 110 aaKnown RBP6.71□□□□□ -1.34
MTHFD1-201ENST00000216605 CFAP126Q5VTH2 177 aa6.71□□□□□ -1.34
MTHFD1-201ENST00000216605 DKK2Q9UBU2 259 aa6.71□□□□□ -1.34
MTHFD1-201ENST00000216605 MXRA5Q9NR99 2828 aa6.71□□□□□ -1.34
MTHFD1-201ENST00000216605 K7EMT4 169 aa6.7□□□□□ -1.34
MTHFD1-201ENST00000216605 PRSS1P07477 247 aa6.7□□□□□ -1.34
MTHFD1-201ENST00000216605 FXYD2P54710 66 aa6.7□□□□□ -1.34
MTHFD1-201ENST00000216605 SNRPD3P62318 126 aaKnown RBP6.7□□□□□ -1.34
MTHFD1-201ENST00000216605 SPANXN1Q5VSR9 72 aa6.7□□□□□ -1.34
MTHFD1-201ENST00000216605 NHP2Q9NX24 153 aaKnown RBP6.7□□□□□ -1.34
MTHFD1-201ENST00000216605 CRLF1O75462 422 aa6.7□□□□□ -1.34
MTHFD1-201ENST00000216605 FOXC2Q99958 501 aa6.7□□□□□ -1.34
MTHFD1-201ENST00000216605 C9orf47Q6ZRZ4 202 aa6.7□□□□□ -1.34
MTHFD1-201ENST00000216605 DYNLRB2Q8TF09 96 aa6.7□□□□□ -1.34
MTHFD1-201ENST00000216605 SMR3AQ99954 134 aa6.7□□□□□ -1.34
MTHFD1-201ENST00000216605 DUSP14O95147 198 aaKnown RBP6.69□□□□□ -1.34
MTHFD1-201ENST00000216605 C4orf26Q17RF5 130 aa6.69□□□□□ -1.34
MTHFD1-201ENST00000216605 Q6ZQT7 251 aa6.69□□□□□ -1.34
MTHFD1-201ENST00000216605 Q6ZSV7 163 aa6.69□□□□□ -1.34
MTHFD1-201ENST00000216605 CHAC1Q9BUX1 264 aa6.69□□□□□ -1.34
MTHFD1-201ENST00000216605 ZNF580Q9UK33 172 aa6.69□□□□□ -1.34
MTHFD1-201ENST00000216605 NPYP01303 97 aa6.69□□□□□ -1.34
MTHFD1-201ENST00000216605 MSRB1Q9NZV6 116 aa6.69□□□□□ -1.34
MTHFD1-201ENST00000216605 PKIGQ9Y2B9 76 aa6.69□□□□□ -1.34
MTHFD1-201ENST00000216605 LINC01619G3V211 115 aa6.68□□□□□ -1.34
MTHFD1-201ENST00000216605 H3BVH4 76 aa6.68□□□□□ -1.34
MTHFD1-201ENST00000216605 IGKCP01834 107 aa6.68□□□□□ -1.34
MTHFD1-201ENST00000216605 FCER1GP30273 86 aa6.68□□□□□ -1.34
MTHFD1-201ENST00000216605 LINC01620Q4KN68 170 aa6.68□□□□□ -1.34
MTHFD1-201ENST00000216605 CARD19Q96LW7 228 aa6.68□□□□□ -1.34
MTHFD1-201ENST00000216605 NXT2Q9NPJ8 142 aaKnown RBP6.68□□□□□ -1.34
MTHFD1-201ENST00000216605 KMT2BQ9UMN6 2715 aaPredicted RBP6.68□□□□□ -1.34
MTHFD1-201ENST00000216605 UNC79Q9P2D8 2635 aa6.68□□□□□ -1.34
MTHFD1-201ENST00000216605 TRAV21A0A0B4J279 112 aa6.68□□□□□ -1.34
MTHFD1-201ENST00000216605 LEPP41159 167 aa6.68□□□□□ -1.34
MTHFD1-201ENST00000216605 TRPT1Q86TN4 253 aaKnown RBP6.68□□□□□ -1.34
MTHFD1-201ENST00000216605 IGKV3D-20A0A0C4DH25 116 aa6.67□□□□□ -1.34
MTHFD1-201ENST00000216605 SMKR1H3BMG3 65 aa6.67□□□□□ -1.34
MTHFD1-201ENST00000216605 H3BS24 57 aa6.67□□□□□ -1.34
MTHFD1-201ENST00000216605 M0R381 172 aa6.67□□□□□ -1.34
MTHFD1-201ENST00000216605 CEND1Q8N111 149 aa6.67□□□□□ -1.34
MTHFD1-201ENST00000216605 DLX4Q92988 240 aaPredicted RBP6.67□□□□□ -1.34
MTHFD1-201ENST00000216605 HHLA3Q9XRX5 114 aa6.67□□□□□ -1.34
MTHFD1-201ENST00000216605 TRBV25-1A0A075B6N4 114 aa6.67□□□□□ -1.34
MTHFD1-201ENST00000216605 HTN1P15515 57 aa6.67□□□□□ -1.34
MTHFD1-201ENST00000216605 SMCPP49901 116 aaPredicted RBP6.67□□□□□ -1.34
MTHFD1-201ENST00000216605 TMEM86BQ8N661 226 aa6.67□□□□□ -1.34
MTHFD1-201ENST00000216605 ESM1Q9NQ30 184 aa6.67□□□□□ -1.34
MTHFD1-201ENST00000216605 C11orf21Q9P2W6 132 aa6.67□□□□□ -1.34
MTHFD1-201ENST00000216605 NOTCH3Q9UM47 2321 aa6.67□□□□□ -1.34
MTHFD1-201ENST00000216605 DPM2O94777 84 aa6.67□□□□□ -1.34
MTHFD1-201ENST00000216605 PMVKQ15126 192 aa6.67□□□□□ -1.34
MTHFD1-201ENST00000216605 RRN3P1Q2M238 152 aa6.67□□□□□ -1.34
MTHFD1-201ENST00000216605 PRR9Q5T870 116 aa6.67□□□□□ -1.34
MTHFD1-201ENST00000216605 C3orf22Q8N5N4 141 aa6.67□□□□□ -1.34
MTHFD1-201ENST00000216605 NBPF19A0A087WUL8 3843 aa6.66□□□□□ -1.34
MTHFD1-201ENST00000216605 IGKV2D-26A0A0A0MRZ7 120 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms