RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Pate4Q09098 99 aa9.25□□□□□ -0.93
Scn8a-203ENSMUST00000108908 B020031M17RikQ3UT11 173 aa9.25□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Dtx1Q61010 627 aa9.25□□□□□ -0.93
Scn8a-203ENSMUST00000108908 CrhQ8CIT0 187 aa9.25□□□□□ -0.93
Scn8a-203ENSMUST00000108908 MavsQ8VCF0 503 aa9.25□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Scgb1b24B1B0N6 92 aa9.25□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Tmem95P0DJF3 176 aa9.25□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Ucp2P70406 309 aa9.25□□□□□ -0.93
Scn8a-203ENSMUST00000108908 D1Ertd622eQ8VEB3 207 aa9.25□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Olfr982Q8VGB3 321 aa9.25□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Igkv9-123A0A140T8N8 117 aa9.24□□□□□ -0.93
Scn8a-203ENSMUST00000108908 H2-DMb2Q31099 261 aa9.24□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Olfr965Q7TRA7 312 aa9.24□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Olfr761Q7TRJ0 323 aa9.24□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Pnrc2Q9CR73 140 aa9.24□□□□□ -0.93
Scn8a-203ENSMUST00000108908 4930544G11RikQ9CR99 193 aa9.24□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Srp19Q9D7A6 144 aa9.24□□□□□ -0.93
Scn8a-203ENSMUST00000108908 CcsQ9WU84 274 aa9.24□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Ighv1-47A0A0A6YY41 117 aa9.24□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Olfr1012Q8VFJ7 311 aa9.24□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Gatad1Q920S3 266 aa9.24□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Lime1Q9EQR5 269 aa9.24□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Tbr1Q64336 681 aa9.24□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Gm10190Q8BSD7 107 aa9.24□□□□□ -0.93
Scn8a-203ENSMUST00000108908 PaxxQ8K0Y7 205 aa9.24□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Tmem101Q91VP7 257 aa9.24□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Myoz1Q9JK37 296 aa9.24□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Ypel2Q65Z95 119 aa9.24□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Cd200r1lQ6XJV6 249 aa9.24□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Ypel1Q9ESC7 118 aa9.24□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Atp5g2P56383 146 aa9.24□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Susd2Q9DBX3 820 aa9.24□□□□□ -0.93
Scn8a-203ENSMUST00000108908 3110082J24RikF6Z6Z2 108 aa9.23□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Slc16a4Q8R0M8 500 aa9.23□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Tbx19Q99ME7 446 aa9.23□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Tmem50aQ9CXL1 157 aa9.23□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Zfp983E9PUT0 460 aa9.23□□□□□ -0.93
Scn8a-203ENSMUST00000108908 SmpxQ9DC77 85 aa9.23□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Ighv1-37A0A0A6YW32 117 aa9.23□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Trbv12-1A0A0B4J1H0 124 aa9.23□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Gm4881A0A140LIR9 352 aa9.23□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Colca2F8VPY8 239 aa9.23□□□□□ -0.93
Scn8a-203ENSMUST00000108908 BmperQ8CJ69 685 aa9.23□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Ndufaf3Q9JKL4 185 aa9.23□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Hdgfl3Q9JMG7 202 aa9.23□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Znf385cA2A5E6 429 aa9.23□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Scgb1b3J3QJY4 93 aa9.23□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Cxcl13O55038 109 aa9.23□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Cited1P97769 203 aa9.23□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Znf691Q3TDE8 283 aa9.23□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Gng5Q80SZ7 68 aa9.23□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Iqcf6G3UWF2 157 aa9.23□□□□□ -0.93
Scn8a-203ENSMUST00000108908 ElaneQ3UP87 265 aa9.23□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Ccpg1osV9GXK1 122 aa9.23□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Gm8251F6VUT6 1994 aa9.23□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Gm17660B9UIU9 90 aa9.23□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Gm21719J3KMI9 230 aa9.23□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Ca11O70354 328 aa9.23□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Csn3P06796 181 aa9.23□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Cacna1eQ61290 2272 aa9.22□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Aqp7O54794 303 aa9.22□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Atp6v0cP63082 155 aa9.22□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Adra2aQ01338 450 aa9.22□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Atp5lQ9CPQ8 103 aa9.22□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Tmem183Q9JJB9 375 aa9.22□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Trav12d-1A0N8R0 115 aa9.22□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Suclg1Q9WUM5 346 aaKnown RBP9.22□□□□□ -0.93
Scn8a-203ENSMUST00000108908 D830044I16RikA0A1D5RM53 117 aa9.22□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Olfr149Q60888 311 aa9.22□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Zfp677Q6PEP4 634 aa9.22□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Vmn1r70Q8R254 298 aa9.22□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Q9DAA3 117 aa9.22□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Iglc3P01845 104 aa9.22□□□□□ -0.93
Scn8a-203ENSMUST00000108908 AdoQ6PDY2 256 aa9.22□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Elovl5Q8BHI7 299 aa9.22□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Foxj2Q9ES18 565 aa9.22□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Ighv5-16A0A0B4J1P4 117 aa9.22□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Gm44501A8R0T9 150 aa9.22□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Gm21974F6W3F3 119 aa9.22□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Gm21913J3KML9 361 aa9.22□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Gm21776J3QPJ5 361 aa9.22□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Acrv1P50289 261 aa9.22□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Smim6Q3U0I6 56 aa9.22□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Snrnp40Q6PE01 358 aa9.22□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Mob4Q6PEB6 225 aa9.22□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Olfr263Q7TQT8 317 aa9.22□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Ndufs8Q8K3J1 212 aa9.22□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Rbmxl2Q9DAE2 385 aaKnown RBP9.22□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Prss44Q402U7 372 aa9.21□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Foxs1Q61574 329 aa9.21□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Ido2Q8R0V5 405 aa9.21□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Pglyrp3A1A547 347 aa9.21□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Wdr86D3Z757 380 aa9.21□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Csrp1P97315 193 aaKnown RBP9.21□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Gm12888Q3UW77 119 aa9.21□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Olfr399Q7TRX3 311 aa9.21□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Shisal2bQ9D1Y9 158 aa9.21□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Trdv5A0A075B661 115 aa9.21□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Ighv7-2A0A0A6YX91 119 aa9.21□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Tnfrsf9P20334 256 aa9.21□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 59.6 ms