RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 PaxxQ8K0Y7 205 aa9.78□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Mrpl16Q99N93 251 aa9.78□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Wrap73Q9JM98 462 aa9.78□□□□□ -0.84
Pcif1-201ENSMUST00000041643 P01660 111 aa9.78□□□□□ -0.84
Pcif1-201ENSMUST00000041643 P01726 129 aa9.78□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Gm10775Q3V290 127 aa9.78□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Q8BTC1 67 aa9.78□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Cypt1Q8CH20 168 aa9.78□□□□□ -0.84
Pcif1-201ENSMUST00000041643 1700025B11RikA0A087WNZ6 93 aa9.78□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Gm5157A0A087WRH8 301 aa9.78□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Gm15080A2BI02 449 aa9.78□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Zfp456B2RUK9 458 aa9.78□□□□□ -0.84
Pcif1-201ENSMUST00000041643 P01649 108 aa9.78□□□□□ -0.84
Pcif1-201ENSMUST00000041643 TctaQ8VEA7 122 aa9.78□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Znf22Q9ERU3 237 aa9.78□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Rspo1Q9Z132 265 aa9.78□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Igkv4-51A0N8I8 119 aa9.77□□□□□ -0.84
Pcif1-201ENSMUST00000041643 BC035044E0CXF8 138 aa9.77□□□□□ -0.84
Pcif1-201ENSMUST00000041643 H2-DMb2Q31099 261 aa9.77□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Fhl4Q8CDC8 279 aa9.77□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Olfr702Q920Z2 318 aa9.77□□□□□ -0.84
Pcif1-201ENSMUST00000041643 MyofQ69ZN7 2048 aaKnown RBP9.77□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Ighv5-12-4A0A0A6YWG4 117 aa9.77□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Ighv6-4A0A0A6YX19 119 aa9.77□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Rnase2O35291 155 aa9.77□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Dynlt3P56387 116 aa9.77□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Dtx1Q61010 627 aa9.77□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Gm10190Q8BSD7 107 aa9.77□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Gm28044L7N1X0 119 aa9.77□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Shisa6Q3UH99 525 aa9.77□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Khdc1aQ3UWR2 166 aa9.77□□□□□ -0.85
Pcif1-201ENSMUST00000041643 BsxQ810B3 232 aa9.77□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Stpg1Q9D2F5 341 aa9.77□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Gp2Q9D733 531 aa9.77□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Hdgfl3Q9JMG7 202 aa9.77□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Ighv3-4A0A0A6YXF1 117 aa9.77□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Gm9964E9Q9S5 144 aa9.77□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Olfr1228Q8VGM9 323 aa9.77□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Gm45623A0A1B0GSF6 103 aa9.77□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Gm21900J3QP38 180 aa9.77□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Foxb2Q64733 428 aa9.77□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Sp5Q9JHX2 398 aa9.77□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Pglyrp3A1A547 347 aa9.76□□□□□ -0.85
Pcif1-201ENSMUST00000041643 AgaQ64191 346 aa9.76□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Olfr365Q8VFT2 312 aa9.76□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Fbln5Q9WVH9 448 aa9.76□□□□□ -0.85
Pcif1-201ENSMUST00000041643 E430018J23RikE9PZQ8 461 aa9.76□□□□□ -0.85
Pcif1-201ENSMUST00000041643 TcapO70548 167 aa9.76□□□□□ -0.85
Pcif1-201ENSMUST00000041643 BC053393A0A0B4J1F6 192 aa9.76□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Zfp493E9Q1L8 384 aa9.76□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Spata46Q4FZF2 204 aa9.76□□□□□ -0.85
Pcif1-201ENSMUST00000041643 C1qtnf5Q8K479 243 aa9.76□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Errfi1Q99JZ7 461 aa9.76□□□□□ -0.85
Pcif1-201ENSMUST00000041643 2200002J24RikQ9D807 110 aa9.76□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Gm44501A8R0T9 150 aa9.76□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Vmn1r1E9PVR6 306 aa9.76□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Gm21913J3KML9 361 aa9.76□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Gm21776J3QPJ5 361 aa9.76□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Pilrb2Q2YFS1 225 aa9.76□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Btf3Q64152 204 aaKnown RBP9.76□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Bpifa5Q9CQX3 270 aa9.76□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Gm6970F7DCP6 221 aa9.75□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Snrpd3P62320 126 aaKnown RBP9.75□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Tpsg1Q9QUL7 311 aa9.75□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Olfr912A0A1L1SSS5 310 aa9.75□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Gm5819E9PZ96 154 aa9.75□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Ly6lH3BJG9 140 aa9.75□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Sfrp2P97299 295 aa9.75□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Olfr1339Q8VGB1 315 aa9.75□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Olfr1413Q8VGU3 323 aa9.75□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Cd5lQ9QWK4 352 aa9.75□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Phf3B2RQG2 2025 aaKnown RBP9.75□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Plcxd2B2RXA1 340 aa9.75□□□□□ -0.85
Pcif1-201ENSMUST00000041643 RhogP84096 191 aa9.75□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Zfp799Q8BHK4 648 aa9.75□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Ifi27Q8C6G0 260 aa9.75□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Ammecr1lQ8JZZ6 310 aa9.75□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Spsb4Q8R5B6 273 aa9.75□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Ighv5-16A0A0B4J1P4 117 aa9.75□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Olfr1331K7N684 317 aa9.75□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Rnase9P60154 184 aa9.75□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Gm12253Q5NC48 229 aa9.75□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Znf787Q8BIF9 381 aa9.75□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Gm4894Q8CA09 118 aa9.75□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Tmem167aQ9CR64 72 aa9.75□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Sdk2Q6V4S5 2176 aa9.74□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Igkv19-93A0A0G2JFZ3 115 aa9.74□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Emp2O88662 172 aa9.74□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Hoxa6P09092 232 aa9.74□□□□□ -0.85
Pcif1-201ENSMUST00000041643 CampP51437 172 aa9.74□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Muc15Q8C6Z1 331 aa9.74□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Olfr482Q8VG03 323 aa9.74□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Esp3J3QN49 87 aa9.74□□□□□ -0.85
Pcif1-201ENSMUST00000041643 AsipQ03288 131 aa9.74□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Olfr150Q60895 312 aa9.74□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Mob4Q6PEB6 225 aa9.74□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Olfr263Q7TQT8 317 aa9.74□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Znf146Q8BQN6 292 aa9.74□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Gm10118Q8C8J5 116 aa9.74□□□□□ -0.85
Pcif1-201ENSMUST00000041643 Tmem183Q9JJB9 375 aa9.74□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 32.1 ms