RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Ighv1-7A0A075B5T7 117 aa10.26□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Olfr466E9Q2B9 308 aa10.26□□□□□ -0.77
Rnf4-201ENSMUST00000030992 P01783 136 aa10.26□□□□□ -0.77
Rnf4-201ENSMUST00000030992 P01915 264 aa10.26□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Sult1a1P52840 291 aa10.26□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Ypel3P61237 119 aa10.26□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Dlx4P70436 240 aa10.26□□□□□ -0.77
Rnf4-201ENSMUST00000030992 H2al1nQ497L1 109 aa10.26□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Znf474Q6V5K9 347 aa10.26□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Rph3alQ768S4 302 aa10.26□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Msrb3Q8BU85 253 aa10.26□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Olfr715Q8VG49 315 aa10.26□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Slc25a2Q99ML6 265 aa10.26□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Q9D8L0 127 aa10.26□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Ighv1-39A0A075B5V5 117 aa10.26□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Igkv1-132A0A0B4J1H9 120 aa10.26□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Psg18B2RSG7 476 aa10.26□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Nsun4C4P6S0 806 aaKnown RBP10.26□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Olfr872E9PVW2 323 aa10.26□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Znf260Q62513 407 aa10.26□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Pcgf1Q8R023 259 aaKnown RBP10.26□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Vmn1r50Q9EP51 310 aa10.26□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Map1aQ9QYR6 2776 aa10.26□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Gm21775J3KMK6 180 aa10.25□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Spint5J3KMK8 105 aa10.25□□□□□ -0.77
Rnf4-201ENSMUST00000030992 E030018B13RikJ3QMS9 113 aa10.25□□□□□ -0.77
Rnf4-201ENSMUST00000030992 ErhP84089 104 aa10.25□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Cnn1Q08091 297 aaKnown RBP10.25□□□□□ -0.77
Rnf4-201ENSMUST00000030992 1700009N14RikQ14AA6 216 aaKnown RBP10.25□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Smug1Q6P5C5 279 aa10.25□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Gm10334Q792Y8 246 aa10.25□□□□□ -0.77
Rnf4-201ENSMUST00000030992 OtosQ8R448 89 aa10.25□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Olfr877Q8VF62 311 aa10.25□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Olfr1258Q8VGN6 311 aa10.25□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Mogat1Q91ZV4 335 aa10.25□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Zfp950A0A0U1RQ46 609 aa10.25□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Ovol3D3YYM0 189 aa10.25□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Slc25a17O70579 307 aa10.25□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Olfr1535Q7TQU0 326 aa10.25□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Slc25a16Q8C0K5 332 aa10.25□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Olfr491Q8VG06 310 aa10.25□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Olfr1326-ps1A0A140T8J7 311 aa10.24□□□□□ -0.77
Rnf4-201ENSMUST00000030992 P01787 123 aa10.24□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Gm21060J3KMU4 56 aa10.24□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Egr1P08046 533 aa10.24□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Crebl2Q32M00 123 aa10.24□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Iba57Q8CAK1 358 aaKnown RBP10.24□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Olfr1271Q8VG62 305 aa10.24□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Rwdd3Q8VIL2 267 aa10.24□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Ighv1-15A0A0A6YXA5 117 aa10.24□□□□□ -0.77
Rnf4-201ENSMUST00000030992 AU041133A0A0J9YVH3 498 aa10.24□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Hoxa6P09092 232 aa10.24□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Rab24P35290 203 aa10.24□□□□□ -0.77
Rnf4-201ENSMUST00000030992 F7P70375 446 aa10.24□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Ttc9cQ810A3 171 aa10.24□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Obp2aQ8K1H9 176 aa10.24□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Olfr1009Q8VFK1 314 aa10.24□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Ppp1r14aQ91VC7 147 aa10.24□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Urm1Q9D2P4 101 aa10.24□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Ap5s1Q9D742 170 aa10.24□□□□□ -0.77
Rnf4-201ENSMUST00000030992 PoleQ9WVF7 2283 aa10.23□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Igkv14-130A0A0G2JF45 117 aa10.23□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Tmem116A0A0G2JGD3 401 aa10.23□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Cldn34c4A2ANA3 212 aa10.23□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Cd209gD3Z5D4 194 aa10.23□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Ascl2O35885 263 aa10.23□□□□□ -0.77
Rnf4-201ENSMUST00000030992 BsgP18572 389 aaKnown RBP10.23□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Gstp1P19157 210 aa10.23□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Dnajc30P59041 219 aa10.23□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Scgb2b24Q7M747 112 aa10.23□□□□□ -0.77
Rnf4-201ENSMUST00000030992 B430305J03RikQ8BQQ8 176 aa10.23□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Olfr346Q8VGJ7 309 aa10.23□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Col13a1Q9R1N9 751 aa10.23□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Trav13n-4A0A0G2JG01 110 aa10.23□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Gm9920D3YVZ2 140 aa10.23□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Olfr218E9PWV2 313 aa10.23□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Gm20481G3UXK4 153 aa10.23□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Loxl2P58022 776 aa10.23□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Ccl12Q62401 104 aa10.23□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Gm10309Q8C648 119 aa10.23□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Olfr577Q8VH11 312 aa10.23□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Zmat5Q9CQR5 170 aa10.23□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Ociad1Q9CRD0 247 aaKnown RBP10.23□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Lypd8Q9D7S0 255 aa10.23□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Trav4-4-dv10A0A075B651 110 aa10.22□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Ighv9-4A0A0A6YWH6 117 aa10.22□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Ptbp1P17225 527 aaKnown RBP10.22□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Pcgf2P23798 342 aaKnown RBP10.22□□□□□ -0.77
Rnf4-201ENSMUST00000030992 SelenotP62342 195 aa10.22□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Onecut2Q6XBJ3 505 aa10.22□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Siglec12Q91Y57 467 aa10.22□□□□□ -0.77
Rnf4-201ENSMUST00000030992 PigpQ9JHG1 132 aa10.22□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Vamp5Q9Z2P8 102 aa10.22□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Gm21913J3KML9 361 aa10.22□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Gm21776J3QPJ5 361 aa10.22□□□□□ -0.77
Rnf4-201ENSMUST00000030992 LalbaP29752 143 aa10.22□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Timp3P39876 211 aa10.22□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Gm16686Q3UMN9 131 aa10.22□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Prss3Q792Z0 246 aaKnown RBP10.22□□□□□ -0.77
Rnf4-201ENSMUST00000030992 C1qtnf4Q8R066 326 aa10.22□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 39.8 ms