RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Olfr1458A0A1L1SSD5 307 aa13.35□□□□□ -0.27
Trim28-201ENSMUST00000005705 Frrs1lB1AXV0 293 aa13.35□□□□□ -0.27
Trim28-201ENSMUST00000005705 Rnf212bD3Z423 297 aa13.35□□□□□ -0.27
Trim28-201ENSMUST00000005705 Zfp708F8VPP0 541 aa13.35□□□□□ -0.27
Trim28-201ENSMUST00000005705 Hoxb2P0C1T1 354 aa13.35□□□□□ -0.27
Trim28-201ENSMUST00000005705 Gnb4P29387 340 aa13.35□□□□□ -0.27
Trim28-201ENSMUST00000005705 Tctn2Q2MV57 700 aa13.35□□□□□ -0.27
Trim28-201ENSMUST00000005705 Gm10842Q3U587 122 aa13.35□□□□□ -0.27
Trim28-201ENSMUST00000005705 SriQ6P069 198 aa13.35□□□□□ -0.27
Trim28-201ENSMUST00000005705 Olfr1181Q7TR18 311 aa13.35□□□□□ -0.27
Trim28-201ENSMUST00000005705 Olfr1102Q8VES2 324 aa13.35□□□□□ -0.27
Trim28-201ENSMUST00000005705 Rab29Q91YQ1 204 aa13.35□□□□□ -0.27
Trim28-201ENSMUST00000005705 TecrQ9CY27 308 aa13.35□□□□□ -0.27
Trim28-201ENSMUST00000005705 Tmem9bQ9JJR8 199 aa13.35□□□□□ -0.27
Trim28-201ENSMUST00000005705 Lbhd2G3UW55 114 aa13.35□□□□□ -0.27
Trim28-201ENSMUST00000005705 Mtco2P00405 227 aaKnown RBP13.35□□□□□ -0.27
Trim28-201ENSMUST00000005705 P18525 117 aa13.35□□□□□ -0.27
Trim28-201ENSMUST00000005705 Olfr963Q7TRA9 311 aa13.35□□□□□ -0.27
Trim28-201ENSMUST00000005705 Necap1Q9CR95 275 aa13.35□□□□□ -0.27
Trim28-201ENSMUST00000005705 Fkbp11Q9D1M7 201 aa13.35□□□□□ -0.27
Trim28-201ENSMUST00000005705 Adamts17E9Q4D1 1122 aa13.34□□□□□ -0.27
Trim28-201ENSMUST00000005705 Gm21244J3QK38 227 aa13.34□□□□□ -0.27
Trim28-201ENSMUST00000005705 F2rl2O08675 369 aa13.34□□□□□ -0.27
Trim28-201ENSMUST00000005705 AgerQ62151 402 aa13.34□□□□□ -0.27
Trim28-201ENSMUST00000005705 Fam19a2Q7TPG7 131 aa13.34□□□□□ -0.27
Trim28-201ENSMUST00000005705 Wipf1Q8K1I7 493 aa13.34□□□□□ -0.27
Trim28-201ENSMUST00000005705 Ndufa2Q9CQ75 99 aa13.34□□□□□ -0.27
Trim28-201ENSMUST00000005705 Cml1Q9JIZ0 222 aa13.34□□□□□ -0.27
Trim28-201ENSMUST00000005705 Chst5Q9QUP4 395 aa13.34□□□□□ -0.27
Trim28-201ENSMUST00000005705 Fcrl6A1YIY0 268 aa13.34□□□□□ -0.27
Trim28-201ENSMUST00000005705 MyadmO35682 320 aaKnown RBP13.34□□□□□ -0.27
Trim28-201ENSMUST00000005705 Timp3P39876 211 aa13.34□□□□□ -0.27
Trim28-201ENSMUST00000005705 Atp5g2P56383 146 aa13.34□□□□□ -0.27
Trim28-201ENSMUST00000005705 Ercc8Q8CFD5 397 aa13.34□□□□□ -0.27
Trim28-201ENSMUST00000005705 Igkv6-23A0A140T8N5 115 aa13.34□□□□□ -0.27
Trim28-201ENSMUST00000005705 Twist1P26687 206 aa13.34□□□□□ -0.27
Trim28-201ENSMUST00000005705 Arrdc5Q497K5 325 aa13.34□□□□□ -0.27
Trim28-201ENSMUST00000005705 Znf329Q6GQR8 522 aa13.34□□□□□ -0.27
Trim28-201ENSMUST00000005705 GgctQ9D7X8 188 aa13.34□□□□□ -0.27
Trim28-201ENSMUST00000005705 Dopey1Q8BL99 2399 aa13.33□□□□□ -0.28
Trim28-201ENSMUST00000005705 H3BKT1 185 aa13.33□□□□□ -0.28
Trim28-201ENSMUST00000005705 Hoxa3P02831 443 aa13.33□□□□□ -0.28
Trim28-201ENSMUST00000005705 Tnfrsf9P20334 256 aa13.33□□□□□ -0.28
Trim28-201ENSMUST00000005705 Rac2Q05144 192 aa13.33□□□□□ -0.28
Trim28-201ENSMUST00000005705 Shisal1Q0VBP7 198 aa13.33□□□□□ -0.28
Trim28-201ENSMUST00000005705 Olfr25Q7TRD6 313 aa13.33□□□□□ -0.28
Trim28-201ENSMUST00000005705 A0A286YDM5 308 aa13.33□□□□□ -0.28
Trim28-201ENSMUST00000005705 Olfr918E9PVZ7 325 aa13.33□□□□□ -0.28
Trim28-201ENSMUST00000005705 Arl14eplQ3UKZ7 152 aa13.33□□□□□ -0.28
Trim28-201ENSMUST00000005705 MiaQ61865 130 aa13.33□□□□□ -0.28
Trim28-201ENSMUST00000005705 Olfr1462Q8VFW3 307 aa13.33□□□□□ -0.28
Trim28-201ENSMUST00000005705 Higd1bQ99JY6 98 aa13.33□□□□□ -0.28
Trim28-201ENSMUST00000005705 Wdr31Q9JHB4 367 aa13.33□□□□□ -0.28
Trim28-201ENSMUST00000005705 Igkv1-133A0A0B4J1H8 120 aa13.32□□□□□ -0.28
Trim28-201ENSMUST00000005705 Efnb3O35393 340 aa13.32□□□□□ -0.28
Trim28-201ENSMUST00000005705 P01674 108 aa13.32□□□□□ -0.28
Trim28-201ENSMUST00000005705 Sumo1P63166 101 aaKnown RBP13.32□□□□□ -0.28
Trim28-201ENSMUST00000005705 Lyplal1Q3UFF7 239 aa13.32□□□□□ -0.28
Trim28-201ENSMUST00000005705 Olfr147Q60886 317 aa13.32□□□□□ -0.28
Trim28-201ENSMUST00000005705 Urm1Q9D2P4 101 aa13.32□□□□□ -0.28
Trim28-201ENSMUST00000005705 Gm27027S4R1M6 97 aa13.32□□□□□ -0.28
Trim28-201ENSMUST00000005705 BC053393A0A0B4J1F6 192 aa13.32□□□□□ -0.28
Trim28-201ENSMUST00000005705 Olfr816Q8VFU2 312 aa13.32□□□□□ -0.28
Trim28-201ENSMUST00000005705 P01655 112 aa13.32□□□□□ -0.28
Trim28-201ENSMUST00000005705 Adam8Q05910 826 aa13.32□□□□□ -0.28
Trim28-201ENSMUST00000005705 Psg17Q62056 475 aa13.32□□□□□ -0.28
Trim28-201ENSMUST00000005705 4930583I09RikQ9D2E3 102 aa13.32□□□□□ -0.28
Trim28-201ENSMUST00000005705 Crybb1Q9WVJ5 250 aa13.32□□□□□ -0.28
Trim28-201ENSMUST00000005705 Cd200r3Q5UKY4 296 aa13.31□□□□□ -0.28
Trim28-201ENSMUST00000005705 Cxxc4Q6NXI8 198 aa13.31□□□□□ -0.28
Trim28-201ENSMUST00000005705 Scgb2b24Q7M747 112 aa13.31□□□□□ -0.28
Trim28-201ENSMUST00000005705 Trib1Q8K4K4 372 aa13.31□□□□□ -0.28
Trim28-201ENSMUST00000005705 Olfr513Q8VFZ3 309 aa13.31□□□□□ -0.28
Trim28-201ENSMUST00000005705 Olfr1258Q8VGN6 311 aa13.31□□□□□ -0.28
Trim28-201ENSMUST00000005705 Lamp5Q9D387 280 aa13.31□□□□□ -0.28
Trim28-201ENSMUST00000005705 Vmn1r149E9PWL6 307 aa13.31□□□□□ -0.28
Trim28-201ENSMUST00000005705 Vmn1r101E9Q365 307 aa13.31□□□□□ -0.28
Trim28-201ENSMUST00000005705 Vmn1r158G3UY92 307 aa13.31□□□□□ -0.28
Trim28-201ENSMUST00000005705 Gm9602J3QPD5 205 aa13.31□□□□□ -0.28
Trim28-201ENSMUST00000005705 BsgP18572 389 aaKnown RBP13.31□□□□□ -0.28
Trim28-201ENSMUST00000005705 Harbi1Q8BR93 349 aa13.31□□□□□ -0.28
Trim28-201ENSMUST00000005705 Nup37Q9CWU9 326 aa13.31□□□□□ -0.28
Trim28-201ENSMUST00000005705 Eny2Q9JIX0 101 aaKnown RBP13.31□□□□□ -0.28
Trim28-201ENSMUST00000005705 Lrrk2Q5S006 2527 aa13.31□□□□□ -0.28
Trim28-201ENSMUST00000005705 Spint5J3KMK8 105 aa13.3□□□□□ -0.28
Trim28-201ENSMUST00000005705 Egr1P08046 533 aa13.3□□□□□ -0.28
Trim28-201ENSMUST00000005705 CebpdQ00322 268 aa13.3□□□□□ -0.28
Trim28-201ENSMUST00000005705 Rbp4Q00724 201 aa13.3□□□□□ -0.28
Trim28-201ENSMUST00000005705 MymxQ2Q5T5 84 aa13.3□□□□□ -0.28
Trim28-201ENSMUST00000005705 CstadQ9D245 104 aa13.3□□□□□ -0.28
Trim28-201ENSMUST00000005705 Dkk1O54908 272 aa13.3□□□□□ -0.28
Trim28-201ENSMUST00000005705 S100a8P27005 89 aa13.3□□□□□ -0.28
Trim28-201ENSMUST00000005705 RanP62827 216 aaKnown RBP13.3□□□□□ -0.28
Trim28-201ENSMUST00000005705 Txn2P97493 166 aa13.3□□□□□ -0.28
Trim28-201ENSMUST00000005705 Gm11232Q5SPI8 295 aa13.3□□□□□ -0.28
Trim28-201ENSMUST00000005705 Vma21Q78T54 101 aa13.3□□□□□ -0.28
Trim28-201ENSMUST00000005705 Slc25a48Q8BW66 306 aa13.3□□□□□ -0.28
Trim28-201ENSMUST00000005705 Vmn1r224E9PWK2 298 aa13.3□□□□□ -0.28
Trim28-201ENSMUST00000005705 Scgb2a2J3KMP9 96 aa13.3□□□□□ -0.28
Trim28-201ENSMUST00000005705 Gm21882J3QN86 361 aa13.3□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms