RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 CITED1Q99966 193 aa6.56□□□□□ -1.36
PHGDH-219ENST00000641513 ZNF256Q9Y2P7 627 aaPredicted RBP6.56□□□□□ -1.36
PHGDH-219ENST00000641513 HLA-DRB4X5D2U9 266 aa6.56□□□□□ -1.36
PHGDH-219ENST00000641513 H3BMM0 161 aa6.55□□□□□ -1.36
PHGDH-219ENST00000641513 NPYP01303 97 aa6.55□□□□□ -1.36
PHGDH-219ENST00000641513 FCER1GP30273 86 aa6.55□□□□□ -1.36
PHGDH-219ENST00000641513 ASIPP42127 132 aa6.55□□□□□ -1.36
PHGDH-219ENST00000641513 MAJINQ3KP22 176 aa6.55□□□□□ -1.36
PHGDH-219ENST00000641513 KRTAP24-1Q3LI83 254 aa6.55□□□□□ -1.36
PHGDH-219ENST00000641513 ODF3L2Q3SX64 289 aa6.55□□□□□ -1.36
PHGDH-219ENST00000641513 STPG4Q8N801 248 aa6.55□□□□□ -1.36
PHGDH-219ENST00000641513 Q8N8P6 123 aa6.55□□□□□ -1.36
PHGDH-219ENST00000641513 OR2K2Q8NGT1 345 aa6.55□□□□□ -1.36
PHGDH-219ENST00000641513 IFI27L1Q96BM0 104 aa6.55□□□□□ -1.36
PHGDH-219ENST00000641513 GOLT1BQ9Y3E0 138 aa6.55□□□□□ -1.36
PHGDH-219ENST00000641513 M0R381 172 aa6.54□□□□□ -1.36
PHGDH-219ENST00000641513 GNRH2O43555 120 aa6.54□□□□□ -1.36
PHGDH-219ENST00000641513 CD7P09564 240 aa6.54□□□□□ -1.36
PHGDH-219ENST00000641513 KRTAP21-3Q3LHN1 58 aa6.54□□□□□ -1.36
PHGDH-219ENST00000641513 C9orf66Q5T8R8 295 aa6.54□□□□□ -1.36
PHGDH-219ENST00000641513 SPANXN1Q5VSR9 72 aa6.54□□□□□ -1.36
PHGDH-219ENST00000641513 C3orf56Q8N813 242 aa6.54□□□□□ -1.36
PHGDH-219ENST00000641513 ZMAT4Q9H898 229 aa6.54□□□□□ -1.36
PHGDH-219ENST00000641513 COX11Q9Y6N1 276 aa6.54□□□□□ -1.36
PHGDH-219ENST00000641513 MUC4Q99102 2169 aa6.53□□□□□ -1.36
PHGDH-219ENST00000641513 IGLV2-18A0A075B6J9 118 aa6.53□□□□□ -1.36
PHGDH-219ENST00000641513 hDV102S1A0JD36 115 aa6.53□□□□□ -1.36
PHGDH-219ENST00000641513 RBMY1BA6NDE4 496 aaKnown RBP6.53□□□□□ -1.36
PHGDH-219ENST00000641513 RBMY1EA6NEQ0 496 aaKnown RBP6.53□□□□□ -1.36
PHGDH-219ENST00000641513 LINC01549A6NIU2 74 aa6.53□□□□□ -1.36
PHGDH-219ENST00000641513 ATP5LO75964 103 aa6.53□□□□□ -1.36
PHGDH-219ENST00000641513 NXPH4O95158 308 aa6.53□□□□□ -1.36
PHGDH-219ENST00000641513 TNFRSF6BO95407 300 aa6.53□□□□□ -1.36
PHGDH-219ENST00000641513 PPP1R17O96001 155 aa6.53□□□□□ -1.36
PHGDH-219ENST00000641513 RBMY1DP0C7P1 496 aaKnown RBP6.53□□□□□ -1.36
PHGDH-219ENST00000641513 HTN1P15515 57 aa6.53□□□□□ -1.36
PHGDH-219ENST00000641513 SEC11AP67812 179 aa6.53□□□□□ -1.36
PHGDH-219ENST00000641513 AMTNQ6UX39 209 aa6.53□□□□□ -1.36
PHGDH-219ENST00000641513 PHLDA3Q9Y5J5 127 aa6.53□□□□□ -1.36
PHGDH-219ENST00000641513 IGHV1OR15-1A0A075B7D0 117 aa6.52□□□□□ -1.37
PHGDH-219ENST00000641513 SPRY2O43597 315 aa6.52□□□□□ -1.37
PHGDH-219ENST00000641513 FGF6P10767 208 aa6.52□□□□□ -1.37
PHGDH-219ENST00000641513 RPL32P62910 135 aaKnown RBP6.52□□□□□ -1.37
PHGDH-219ENST00000641513 BATFQ16520 125 aa6.52□□□□□ -1.37
PHGDH-219ENST00000641513 BVES-AS1Q5T3Y7 98 aa6.52□□□□□ -1.37
PHGDH-219ENST00000641513 BOD1L2Q8IYS8 172 aa6.52□□□□□ -1.37
PHGDH-219ENST00000641513 POM121L12Q8N7R1 296 aa6.52□□□□□ -1.37
PHGDH-219ENST00000641513 C20orf78Q9BR46 151 aa6.52□□□□□ -1.37
PHGDH-219ENST00000641513 MSRB1Q9NZV6 116 aa6.52□□□□□ -1.37
PHGDH-219ENST00000641513 CBY3A6NI87 242 aa6.51□□□□□ -1.37
PHGDH-219ENST00000641513 A8MTW9 85 aa6.51□□□□□ -1.37
PHGDH-219ENST00000641513 INSP01308 110 aa6.51□□□□□ -1.37
PHGDH-219ENST00000641513 RPL35AP18077 110 aaKnown RBP6.51□□□□□ -1.37
PHGDH-219ENST00000641513 HINT1P49773 126 aaPredicted RBP6.51□□□□□ -1.37
PHGDH-219ENST00000641513 INSL3P51460 131 aa6.51□□□□□ -1.37
PHGDH-219ENST00000641513 BEAN1Q3B7T3 259 aa6.51□□□□□ -1.37
PHGDH-219ENST00000641513 GTSCR1Q86UQ5 136 aa6.51□□□□□ -1.37
PHGDH-219ENST00000641513 PRIMA1Q86XR5 153 aa6.51□□□□□ -1.37
PHGDH-219ENST00000641513 NRACQ8N912 160 aa6.51□□□□□ -1.37
PHGDH-219ENST00000641513 SPATA3Q8NHX4 192 aa6.51□□□□□ -1.37
PHGDH-219ENST00000641513 LINC01587Q99440 93 aa6.51□□□□□ -1.37
PHGDH-219ENST00000641513 MCRIP2Q9BUT9 160 aaKnown RBP6.51□□□□□ -1.37
PHGDH-219ENST00000641513 WFDC10AQ9H1F0 79 aa6.51□□□□□ -1.37
PHGDH-219ENST00000641513 HIGD1BQ9P298 99 aa6.51□□□□□ -1.37
PHGDH-219ENST00000641513 XCL2Q9UBD3 114 aa6.51□□□□□ -1.37
PHGDH-219ENST00000641513 TRGV11A0A075B6L2 103 aa6.5□□□□□ -1.37
PHGDH-219ENST00000641513 IGHV3OR16-12A0A075B7B8 117 aa6.5□□□□□ -1.37
PHGDH-219ENST00000641513 LOC389332A0A1B0GUA5 103 aa6.5□□□□□ -1.37
PHGDH-219ENST00000641513 NCR2O95944 276 aa6.5□□□□□ -1.37
PHGDH-219ENST00000641513 EVI2AP22794 236 aa6.5□□□□□ -1.37
PHGDH-219ENST00000641513 G0S2P27469 103 aa6.5□□□□□ -1.37
PHGDH-219ENST00000641513 HSD52Q0P140 79 aa6.5□□□□□ -1.37
PHGDH-219ENST00000641513 C2orf91Q6ZV80 131 aa6.5□□□□□ -1.37
PHGDH-219ENST00000641513 TRPT1Q86TN4 253 aaKnown RBP6.5□□□□□ -1.37
PHGDH-219ENST00000641513 Q8N1Y9 231 aa6.5□□□□□ -1.37
PHGDH-219ENST00000641513 TRAV12-1A0A0B4J245 112 aa6.49□□□□□ -1.37
PHGDH-219ENST00000641513 NUDT3O95989 172 aa6.49□□□□□ -1.37
PHGDH-219ENST00000641513 RBMY1A1P0DJD3 496 aaKnown RBP6.49□□□□□ -1.37
PHGDH-219ENST00000641513 RBMY1CP0DJD4 496 aa6.49□□□□□ -1.37
PHGDH-219ENST00000641513 RNASE3P12724 160 aaKnown RBP6.49□□□□□ -1.37
PHGDH-219ENST00000641513 UBE2V1Q13404 147 aa6.49□□□□□ -1.37
PHGDH-219ENST00000641513 LAGE3Q14657 143 aa6.49□□□□□ -1.37
PHGDH-219ENST00000641513 ODF1Q14990 250 aa6.49□□□□□ -1.37
PHGDH-219ENST00000641513 RBMY1FQ15415 496 aaKnown RBP6.49□□□□□ -1.37
PHGDH-219ENST00000641513 ORMDL2Q53FV1 153 aa6.49□□□□□ -1.37
PHGDH-219ENST00000641513 MPV17L2Q567V2 206 aa6.49□□□□□ -1.37
PHGDH-219ENST00000641513 TMEM158Q8WZ71 300 aa6.49□□□□□ -1.37
PHGDH-219ENST00000641513 CLUHP3Q96NS8 147 aa6.49□□□□□ -1.37
PHGDH-219ENST00000641513 SMIM2Q9BVW6 85 aa6.49□□□□□ -1.37
PHGDH-219ENST00000641513 DPH3P1Q9H4G8 78 aa6.49□□□□□ -1.37
PHGDH-219ENST00000641513 IGHV3-16A0A0C4DH30 117 aa6.48□□□□□ -1.37
PHGDH-219ENST00000641513 A6NDN8 102 aa6.48□□□□□ -1.37
PHGDH-219ENST00000641513 SMKR1H3BMG3 65 aa6.48□□□□□ -1.37
PHGDH-219ENST00000641513 MGPP08493 103 aa6.48□□□□□ -1.37
PHGDH-219ENST00000641513 NPSP0C0P6 89 aa6.48□□□□□ -1.37
PHGDH-219ENST00000641513 SMIM17P0DL12 118 aa6.48□□□□□ -1.37
PHGDH-219ENST00000641513 TMEM97Q5BJF2 176 aa6.48□□□□□ -1.37
PHGDH-219ENST00000641513 SHISA2Q6UWI4 295 aa6.48□□□□□ -1.37
PHGDH-219ENST00000641513 SYT8Q8NBV8 401 aa6.48□□□□□ -1.37
PHGDH-219ENST00000641513 AP1S3Q96PC3 154 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms