RNA–Protein interactions for RNA: ENST00000641487.1

CASC19-233, Transcript of cancer susceptibility 19, human

Gene CASC19, Length 966 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-233	ENST00000641487	NEDD8	Q15843	81 aa		3.92	□□□□□ -1.78
CASC19-233	ENST00000641487	PSMG4	Q5JS54	123 aa		3.92	□□□□□ -1.78
CASC19-233	ENST00000641487	TMEM75	Q8N9X5	138 aa		3.92	□□□□□ -1.78
CASC19-233	ENST00000641487	C18orf15	Q96N68	181 aa		3.92	□□□□□ -1.78
CASC19-233	ENST00000641487	OPRPN	Q99935	248 aa	Predicted RBP	3.92	□□□□□ -1.78
CASC19-233	ENST00000641487	UQCC1	Q9NVA1	299 aa		3.92	□□□□□ -1.78
CASC19-233	ENST00000641487	CACFD1	Q9UGQ2	172 aa		3.92	□□□□□ -1.78
CASC19-233	ENST00000641487		A0A1W2PRE2	83 aa		3.91	□□□□□ -1.78
CASC19-233	ENST00000641487	INMT-MINDY4	F8WBC2	141 aa		3.91	□□□□□ -1.78
CASC19-233	ENST00000641487		H3BMM0	161 aa		3.91	□□□□□ -1.78
CASC19-233	ENST00000641487	IGLV2-8	P01709	118 aa		3.91	□□□□□ -1.78
CASC19-233	ENST00000641487	IGLC1	P0CG04	106 aa		3.91	□□□□□ -1.78
CASC19-233	ENST00000641487	HLA-DRB4	P13762	266 aa		3.91	□□□□□ -1.78
CASC19-233	ENST00000641487	OR10J1	P30954	320 aa		3.91	□□□□□ -1.78
CASC19-233	ENST00000641487	PIGP	P57054	158 aa		3.91	□□□□□ -1.78
CASC19-233	ENST00000641487	RPL36A	P83881	106 aa	Known RBP	3.91	□□□□□ -1.78
CASC19-233	ENST00000641487	FABP9	Q0Z7S8	132 aa		3.91	□□□□□ -1.78
CASC19-233	ENST00000641487	RNF212	Q495C1	297 aa		3.91	□□□□□ -1.78
CASC19-233	ENST00000641487	MPV17L2	Q567V2	206 aa		3.91	□□□□□ -1.78
CASC19-233	ENST00000641487	SPINK9	Q5DT21	86 aa		3.91	□□□□□ -1.78
CASC19-233	ENST00000641487	ZNF705A	Q6ZN79	300 aa	Predicted RBP	3.91	□□□□□ -1.78
CASC19-233	ENST00000641487		Q6ZR54	194 aa		3.91	□□□□□ -1.78
CASC19-233	ENST00000641487	FA2H	Q7L5A8	372 aa		3.91	□□□□□ -1.78
CASC19-233	ENST00000641487	LHFPL1	Q86WI0	220 aa		3.91	□□□□□ -1.78
CASC19-233	ENST00000641487	ANKRD29	Q8N6D5	301 aa		3.91	□□□□□ -1.78
CASC19-233	ENST00000641487	TMEM101	Q96IK0	257 aa		3.91	□□□□□ -1.78
CASC19-233	ENST00000641487	TMEM147	Q9BVK8	224 aa		3.91	□□□□□ -1.78
CASC19-233	ENST00000641487	CELA1	Q9UNI1	258 aa		3.91	□□□□□ -1.78
CASC19-233	ENST00000641487	HLA-DRB4	X5D2U9	266 aa		3.91	□□□□□ -1.78
CASC19-233	ENST00000641487	IGLV1-50	A0A075B6I6	118 aa		3.9	□□□□□ -1.79
CASC19-233	ENST00000641487	C3orf85	A0A1B0GTC6	90 aa		3.9	□□□□□ -1.79
CASC19-233	ENST00000641487	ZNF705F	A8MVS1	300 aa	Predicted RBP	3.9	□□□□□ -1.79
CASC19-233	ENST00000641487		B4DEV8	164 aa		3.9	□□□□□ -1.79
CASC19-233	ENST00000641487		M0R2N4	97 aa		3.9	□□□□□ -1.79
CASC19-233	ENST00000641487	CCNK	O75909	580 aa		3.9	□□□□□ -1.79
CASC19-233	ENST00000641487	NDUFC2	O95298	119 aa		3.9	□□□□□ -1.79
CASC19-233	ENST00000641487	IL4	P05112	153 aa		3.9	□□□□□ -1.79
CASC19-233	ENST00000641487	ZNF705D	P0CH99	300 aa	Predicted RBP	3.9	□□□□□ -1.79
CASC19-233	ENST00000641487	ZNF705B	P0CI00	300 aa	Predicted RBP	3.9	□□□□□ -1.79
CASC19-233	ENST00000641487	ORM2	P19652	201 aa		3.9	□□□□□ -1.79
CASC19-233	ENST00000641487	ETV6	P41212	452 aa		3.9	□□□□□ -1.79
CASC19-233	ENST00000641487	HERVK_113	P63121	156 aa		3.9	□□□□□ -1.79
CASC19-233	ENST00000641487	GNG5	P63218	68 aa		3.9	□□□□□ -1.79
CASC19-233	ENST00000641487	C2orf83	Q53S99	150 aa		3.9	□□□□□ -1.79
CASC19-233	ENST00000641487	RNASE10	Q5GAN6	216 aa	Known RBP	3.9	□□□□□ -1.79
CASC19-233	ENST00000641487	PRSS54	Q6PEW0	395 aa		3.9	□□□□□ -1.79
CASC19-233	ENST00000641487	ZNF767P	Q75MW2	155 aa		3.9	□□□□□ -1.79
CASC19-233	ENST00000641487	UBE2DNL	Q8IWF7	75 aa		3.9	□□□□□ -1.79
CASC19-233	ENST00000641487	C15orf40	Q8WUR7	153 aa		3.9	□□□□□ -1.79
CASC19-233	ENST00000641487	GPR146	Q96CH1	333 aa		3.9	□□□□□ -1.79
CASC19-233	ENST00000641487	TP53RK	Q96S44	253 aa		3.9	□□□□□ -1.79
CASC19-233	ENST00000641487	GTSF1L	Q9H1H1	148 aa		3.9	□□□□□ -1.79
CASC19-233	ENST00000641487	WFDC1	Q9HC57	220 aa		3.9	□□□□□ -1.79
CASC19-233	ENST00000641487	MRPL36	Q9P0J6	103 aa	Known RBP	3.9	□□□□□ -1.79
CASC19-233	ENST00000641487	COPZ2	Q9P299	210 aa		3.9	□□□□□ -1.79
CASC19-233	ENST00000641487	ZNF706	Q9Y5V0	76 aa	Predicted RBP	3.9	□□□□□ -1.79
CASC19-233	ENST00000641487	RFNG	Q9Y644	331 aa		3.9	□□□□□ -1.79
CASC19-233	ENST00000641487	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	3.89	□□□□□ -1.79
CASC19-233	ENST00000641487	CDS2	O95674	445 aa		3.89	□□□□□ -1.79
CASC19-233	ENST00000641487	IGKV2-30	P06310	120 aa		3.89	□□□□□ -1.79
CASC19-233	ENST00000641487	AKR1C3	P42330	323 aa		3.89	□□□□□ -1.79
CASC19-233	ENST00000641487	NMU	P48645	174 aa		3.89	□□□□□ -1.79
CASC19-233	ENST00000641487	MEOX2	P50222	304 aa		3.89	□□□□□ -1.79
CASC19-233	ENST00000641487	DAZ2	Q13117	558 aa	Known RBP	3.89	□□□□□ -1.79
CASC19-233	ENST00000641487	BTN1A1	Q13410	526 aa		3.89	□□□□□ -1.79
CASC19-233	ENST00000641487	C1orf134	Q5TEV5	83 aa		3.89	□□□□□ -1.79
CASC19-233	ENST00000641487	FOXI2	Q6ZQN5	318 aa		3.89	□□□□□ -1.79
CASC19-233	ENST00000641487	DAZ4	Q86SG3	579 aa	Known RBP	3.89	□□□□□ -1.79
CASC19-233	ENST00000641487	SNX29P2	Q8IUI4	249 aa		3.89	□□□□□ -1.79
CASC19-233	ENST00000641487	TERB2	Q8NHR7	220 aa		3.89	□□□□□ -1.79
CASC19-233	ENST00000641487	MED28	Q9H204	178 aa		3.89	□□□□□ -1.79
CASC19-233	ENST00000641487	SDF2L1	Q9HCN8	221 aa		3.89	□□□□□ -1.79
CASC19-233	ENST00000641487	DAZ3	Q9NR90	486 aa	Known RBP	3.89	□□□□□ -1.79
CASC19-233	ENST00000641487	COMMD3	Q9UBI1	195 aa		3.89	□□□□□ -1.79
CASC19-233	ENST00000641487	APOB	P04114	4563 aa	Known RBP	3.89	□□□□□ -1.79
CASC19-233	ENST00000641487	HERC1	Q15751	4861 aa		3.88	□□□□□ -1.79
CASC19-233	ENST00000641487	IGLV2-18	A0A075B6J9	118 aa		3.88	□□□□□ -1.79
CASC19-233	ENST00000641487	RGS5	O15539	181 aa		3.88	□□□□□ -1.79
CASC19-233	ENST00000641487	SCO1	O75880	301 aa		3.88	□□□□□ -1.79
CASC19-233	ENST00000641487	APOM	O95445	188 aa		3.88	□□□□□ -1.79
CASC19-233	ENST00000641487	CD3D	P04234	171 aa		3.88	□□□□□ -1.79
CASC19-233	ENST00000641487	ELK1	P19419	428 aa		3.88	□□□□□ -1.79
CASC19-233	ENST00000641487	TGFBR1	P36897	503 aa		3.88	□□□□□ -1.79
CASC19-233	ENST00000641487	CXCL5	P42830	114 aa		3.88	□□□□□ -1.79
CASC19-233	ENST00000641487	UBE2A	P49459	152 aa		3.88	□□□□□ -1.79
CASC19-233	ENST00000641487	CCR6	P51684	374 aa		3.88	□□□□□ -1.79
CASC19-233	ENST00000641487	EMP1	P54849	157 aa		3.88	□□□□□ -1.79
CASC19-233	ENST00000641487	TMBIM6	P55061	237 aa		3.88	□□□□□ -1.79
CASC19-233	ENST00000641487	SSBP1	Q04837	148 aa	Known RBP	3.88	□□□□□ -1.79
CASC19-233	ENST00000641487	SP6	Q3SY56	376 aa		3.88	□□□□□ -1.79
CASC19-233	ENST00000641487	IBA57	Q5T440	356 aa	Known RBP	3.88	□□□□□ -1.79
CASC19-233	ENST00000641487	SLC25A29	Q8N8R3	303 aa		3.88	□□□□□ -1.79
CASC19-233	ENST00000641487	C15orf53	Q8NAA6	179 aa		3.88	□□□□□ -1.79
CASC19-233	ENST00000641487	C20orf203	Q8NBC4	194 aa		3.88	□□□□□ -1.79
CASC19-233	ENST00000641487	FRZB	Q92765	325 aa		3.88	□□□□□ -1.79
CASC19-233	ENST00000641487	RBPMS	Q93062	196 aa	Known RBP	3.88	□□□□□ -1.79
CASC19-233	ENST00000641487	CCDC32	Q9BV29	185 aa		3.88	□□□□□ -1.79
CASC19-233	ENST00000641487	SCRT1	Q9BWW7	348 aa		3.88	□□□□□ -1.79
CASC19-233	ENST00000641487	TMEM222	Q9H0R3	208 aa		3.88	□□□□□ -1.79
CASC19-233	ENST00000641487	ZNF331	Q9NQX6	463 aa	Predicted RBP	3.88	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms