RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 IGLL5B9A064 214 aa4.83□□□□□ -1.64
SCARB2-224ENST00000640880 SNAI2O43623 268 aa4.83□□□□□ -1.64
SCARB2-224ENST00000640880 CHTF8P0CG12 524 aa4.83□□□□□ -1.64
SCARB2-224ENST00000640880 GLRXP35754 106 aa4.83□□□□□ -1.64
SCARB2-224ENST00000640880 CACNG7P62955 275 aa4.83□□□□□ -1.64
SCARB2-224ENST00000640880 KLRD1Q13241 179 aa4.83□□□□□ -1.64
SCARB2-224ENST00000640880 EDDM3AQ14507 147 aa4.83□□□□□ -1.64
SCARB2-224ENST00000640880 LTC4SQ16873 150 aa4.83□□□□□ -1.64
SCARB2-224ENST00000640880 UTF1Q5T230 341 aa4.83□□□□□ -1.64
SCARB2-224ENST00000640880 ZNF826PQ6ZT77 177 aa4.83□□□□□ -1.64
SCARB2-224ENST00000640880 LINC00305Q7Z4B0 112 aa4.83□□□□□ -1.64
SCARB2-224ENST00000640880 ORMDL3Q8N138 153 aa4.83□□□□□ -1.64
SCARB2-224ENST00000640880 LYPD1Q8N2G4 141 aa4.83□□□□□ -1.64
SCARB2-224ENST00000640880 TMEM75Q8N9X5 138 aa4.83□□□□□ -1.64
SCARB2-224ENST00000640880 OR8A1Q8NGG7 326 aa4.83□□□□□ -1.64
SCARB2-224ENST00000640880 TMEM167AQ8TBQ9 72 aa4.83□□□□□ -1.64
SCARB2-224ENST00000640880 ZC2HC1AQ96GY0 325 aa4.83□□□□□ -1.64
SCARB2-224ENST00000640880 PRELID3AQ96N28 172 aa4.83□□□□□ -1.64
SCARB2-224ENST00000640880 SPANXA1Q9NS26 97 aa4.83□□□□□ -1.64
SCARB2-224ENST00000640880 USP9XQ93008 2570 aaPredicted RBP4.83□□□□□ -1.64
SCARB2-224ENST00000640880 SPTAN1Q13813 2472 aaKnown RBP4.83□□□□□ -1.64
SCARB2-224ENST00000640880 RELNP78509 3460 aa4.82□□□□□ -1.64
SCARB2-224ENST00000640880 IGKV1D-17A0A075B6S4 117 aa4.82□□□□□ -1.64
SCARB2-224ENST00000640880 H3BMG7 143 aa4.82□□□□□ -1.64
SCARB2-224ENST00000640880 K7EMT4 169 aa4.82□□□□□ -1.64
SCARB2-224ENST00000640880 CRLF1O75462 422 aa4.82□□□□□ -1.64
SCARB2-224ENST00000640880 SAA1P0DJI8 122 aaPredicted RBP4.82□□□□□ -1.64
SCARB2-224ENST00000640880 COL8A2P25067 703 aa4.82□□□□□ -1.64
SCARB2-224ENST00000640880 IFI27P40305 119 aaPredicted RBP4.82□□□□□ -1.64
SCARB2-224ENST00000640880 NMUP48645 174 aa4.82□□□□□ -1.64
SCARB2-224ENST00000640880 FXYD2P54710 66 aa4.82□□□□□ -1.64
SCARB2-224ENST00000640880 REG3AQ06141 175 aa4.82□□□□□ -1.64
SCARB2-224ENST00000640880 WFDC2Q14508 124 aa4.82□□□□□ -1.64
SCARB2-224ENST00000640880 DEFB113Q30KQ7 82 aa4.82□□□□□ -1.64
SCARB2-224ENST00000640880 FAM104BQ5XKR9 115 aa4.82□□□□□ -1.64
SCARB2-224ENST00000640880 ZNF833PQ6ZTB9 187 aa4.82□□□□□ -1.64
SCARB2-224ENST00000640880 MRAPQ8TCY5 172 aa4.82□□□□□ -1.64
SCARB2-224ENST00000640880 SRSF12Q8WXF0 261 aaKnown RBP4.82□□□□□ -1.64
SCARB2-224ENST00000640880 NAA38Q9BRA0 125 aaKnown RBP4.82□□□□□ -1.64
SCARB2-224ENST00000640880 SLC25A39Q9BZJ4 359 aaPredicted RBP4.82□□□□□ -1.64
SCARB2-224ENST00000640880 RAB1BQ9H0U4 201 aa4.82□□□□□ -1.64
SCARB2-224ENST00000640880 PRO0461Q9UI25 63 aa4.82□□□□□ -1.64
SCARB2-224ENST00000640880 PRR14LQ5THK1 2151 aa4.82□□□□□ -1.64
SCARB2-224ENST00000640880 LRRK2Q5S007 2527 aa4.82□□□□□ -1.64
SCARB2-224ENST00000640880 PTPN13Q12923 2485 aa4.82□□□□□ -1.64
SCARB2-224ENST00000640880 TENM4Q6N022 2769 aa4.82□□□□□ -1.64
SCARB2-224ENST00000640880 TET2Q6N021 2002 aaPredicted RBP4.81□□□□□ -1.64
SCARB2-224ENST00000640880 E7EQL1 145 aa4.81□□□□□ -1.64
SCARB2-224ENST00000640880 ARMS2P0C7Q2 107 aa4.81□□□□□ -1.64
SCARB2-224ENST00000640880 CD24P25063 80 aa4.81□□□□□ -1.64
SCARB2-224ENST00000640880 LOXP28300 417 aaPredicted RBP4.81□□□□□ -1.64
SCARB2-224ENST00000640880 FCER1GP30273 86 aa4.81□□□□□ -1.64
SCARB2-224ENST00000640880 ATP5J2P56134 94 aa4.81□□□□□ -1.64
SCARB2-224ENST00000640880 KRTAP10-9P60411 292 aa4.81□□□□□ -1.64
SCARB2-224ENST00000640880 RRN3P1Q2M238 152 aa4.81□□□□□ -1.64
SCARB2-224ENST00000640880 C12orf74Q32Q52 190 aa4.81□□□□□ -1.64
SCARB2-224ENST00000640880 CASC10Q5T4H9 136 aa4.81□□□□□ -1.64
SCARB2-224ENST00000640880 PCP2Q8IVA1 136 aa4.81□□□□□ -1.64
SCARB2-224ENST00000640880 FOXC2Q99958 501 aa4.81□□□□□ -1.64
SCARB2-224ENST00000640880 ERG28Q9UKR5 140 aa4.81□□□□□ -1.64
SCARB2-224ENST00000640880 HHLA3Q9XRX5 114 aa4.81□□□□□ -1.64
SCARB2-224ENST00000640880 LINC00312Q9Y6C7 94 aa4.81□□□□□ -1.64
SCARB2-224ENST00000640880 USP9YO00507 2555 aaPredicted RBP4.8□□□□□ -1.64
SCARB2-224ENST00000640880 TRBV25-1A0A075B6N4 114 aa4.8□□□□□ -1.64
SCARB2-224ENST00000640880 WI2-2373I1.2A0A1W2PRP0 233 aa4.8□□□□□ -1.64
SCARB2-224ENST00000640880 D6R8Y8 96 aa4.8□□□□□ -1.64
SCARB2-224ENST00000640880 DPM2O94777 84 aa4.8□□□□□ -1.64
SCARB2-224ENST00000640880 LHBP01229 141 aa4.8□□□□□ -1.64
SCARB2-224ENST00000640880 IGKCP01834 107 aa4.8□□□□□ -1.64
SCARB2-224ENST00000640880 MT3P25713 68 aa4.8□□□□□ -1.64
SCARB2-224ENST00000640880 TCTAP57738 103 aa4.8□□□□□ -1.64
SCARB2-224ENST00000640880 ETDBQ3ZM63 59 aa4.8□□□□□ -1.64
SCARB2-224ENST00000640880 LYRM7Q5U5X0 104 aa4.8□□□□□ -1.64
SCARB2-224ENST00000640880 S100A7AQ86SG5 101 aa4.8□□□□□ -1.64
SCARB2-224ENST00000640880 GTSCR1Q86UQ5 136 aa4.8□□□□□ -1.64
SCARB2-224ENST00000640880 C14orf178Q8N769 122 aaPredicted RBP4.8□□□□□ -1.64
SCARB2-224ENST00000640880 TMEM158Q8WZ71 300 aa4.8□□□□□ -1.64
SCARB2-224ENST00000640880 NXT2Q9NPJ8 142 aaKnown RBP4.8□□□□□ -1.64
SCARB2-224ENST00000640880 NHP2Q9NX24 153 aaKnown RBP4.8□□□□□ -1.64
SCARB2-224ENST00000640880 RPUSD1Q9UJJ7 312 aaKnown RBP4.8□□□□□ -1.64
SCARB2-224ENST00000640880 HIGD1AQ9Y241 93 aa4.8□□□□□ -1.64
SCARB2-224ENST00000640880 TIMM8BQ9Y5J9 83 aaPredicted RBP4.8□□□□□ -1.64
SCARB2-224ENST00000640880 ABCA4P78363 2273 aa4.8□□□□□ -1.64
SCARB2-224ENST00000640880 CADP27708 2225 aa4.8□□□□□ -1.64
SCARB2-224ENST00000640880 FLNCQ14315 2725 aa4.8□□□□□ -1.64
SCARB2-224ENST00000640880 TMEM262E9PQX1 116 aa4.79□□□□□ -1.64
SCARB2-224ENST00000640880 APOMO95445 188 aa4.79□□□□□ -1.64
SCARB2-224ENST00000640880 OXTP01178 125 aa4.79□□□□□ -1.64
SCARB2-224ENST00000640880 TFF1P04155 84 aa4.79□□□□□ -1.64
SCARB2-224ENST00000640880 SPINK8P0C7L1 97 aa4.79□□□□□ -1.64
SCARB2-224ENST00000640880 ORM2P19652 201 aa4.79□□□□□ -1.64
SCARB2-224ENST00000640880 WT1-ASQ06250 92 aa4.79□□□□□ -1.64
SCARB2-224ENST00000640880 MRPL51Q4U2R6 128 aaKnown RBP4.79□□□□□ -1.64
SCARB2-224ENST00000640880 LINC00336Q6ZUF6 198 aa4.79□□□□□ -1.64
SCARB2-224ENST00000640880 PRNTQ86SH4 94 aa4.79□□□□□ -1.64
SCARB2-224ENST00000640880 OR4C13Q8NGP0 309 aa4.79□□□□□ -1.64
SCARB2-224ENST00000640880 PPDPFLQ8WWR9 84 aa4.79□□□□□ -1.64
SCARB2-224ENST00000640880 FLYWCH2Q96CP2 140 aaKnown RBP4.79□□□□□ -1.64
SCARB2-224ENST00000640880 MAP1LC3AQ9H492 121 aa4.79□□□□□ -1.64
SCARB2-224ENST00000640880 PSG8Q9UQ74 426 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 232 ms