RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 C14orf178Q8N769 122 aaPredicted RBP18.3■□□□□ 0.52
VEGFA-231ENST00000640499 RNASE7Q9H1E1 156 aaKnown RBP18.3■□□□□ 0.52
VEGFA-231ENST00000640499 P01737 135 aa18.29■□□□□ 0.52
VEGFA-231ENST00000640499 CEBPGP53567 150 aa18.29■□□□□ 0.52
VEGFA-231ENST00000640499 RHOHQ15669 191 aa18.29■□□□□ 0.52
VEGFA-231ENST00000640499 KRTAP1-5Q9BYS1 174 aa18.29■□□□□ 0.52
VEGFA-231ENST00000640499 BIN3Q9NQY0 253 aa18.29■□□□□ 0.52
VEGFA-231ENST00000640499 RPS20P60866 119 aaKnown RBP18.28■□□□□ 0.52
VEGFA-231ENST00000640499 PRADC1Q9BSG0 188 aa18.28■□□□□ 0.52
VEGFA-231ENST00000640499 FAM74A4Q5TZK3 123 aa18.27■□□□□ 0.52
VEGFA-231ENST00000640499 RHODO00212 210 aa18.26■□□□□ 0.51
VEGFA-231ENST00000640499 LINC00694P0DN24 101 aa18.26■□□□□ 0.51
VEGFA-231ENST00000640499 SSTP61278 116 aa18.26■□□□□ 0.51
VEGFA-231ENST00000640499 FER1L6-AS1Q8NA97 138 aa18.25■□□□□ 0.51
VEGFA-231ENST00000640499 SMIM7Q9BQ49 75 aa18.25■□□□□ 0.51
VEGFA-231ENST00000640499 KIF25-AS1Q9Y6Z4 181 aa18.25■□□□□ 0.51
VEGFA-231ENST00000640499 SPANXN1Q5VSR9 72 aa18.24■□□□□ 0.51
VEGFA-231ENST00000640499 MSRB1Q9NZV6 116 aa18.24■□□□□ 0.51
VEGFA-231ENST00000640499 LY96Q9Y6Y9 160 aa18.24■□□□□ 0.51
VEGFA-231ENST00000640499 LINC01551Q86U37 167 aa18.23■□□□□ 0.51
VEGFA-231ENST00000640499 TPPP3Q9BW30 176 aa18.23■□□□□ 0.51
VEGFA-231ENST00000640499 RPP21Q9H633 154 aaKnown RBP18.23■□□□□ 0.51
VEGFA-231ENST00000640499 ZNF727A8MUV8 499 aa18.22■□□□□ 0.51
VEGFA-231ENST00000640499 TIRAPP58753 221 aa18.22■□□□□ 0.51
VEGFA-231ENST00000640499 LINC00315P59091 139 aa18.22■□□□□ 0.51
VEGFA-231ENST00000640499 SH2D6Q7Z4S9 175 aa18.22■□□□□ 0.51
VEGFA-231ENST00000640499 GAGE12JA6NER3 117 aa18.21■□□□□ 0.51
VEGFA-231ENST00000640499 GAGE1Q13065 139 aa18.21■□□□□ 0.51
VEGFA-231ENST00000640499 GAGE4Q13068 117 aa18.21■□□□□ 0.51
VEGFA-231ENST00000640499 GAGE5Q13069 117 aa18.21■□□□□ 0.51
VEGFA-231ENST00000640499 GAGE13Q4V321 117 aa18.21■□□□□ 0.51
VEGFA-231ENST00000640499 LYZL1Q6UWQ5 148 aa18.21■□□□□ 0.51
VEGFA-231ENST00000640499 FAM231DQ6ZW35 169 aa18.21■□□□□ 0.51
VEGFA-231ENST00000640499 HECTD4Q9Y4D8 3996 aa18.2■□□□□ 0.5
VEGFA-231ENST00000640499 PKD1P98161 4303 aa18.2■□□□□ 0.5
VEGFA-231ENST00000640499 SIVA1O15304 175 aa18.2■□□□□ 0.5
VEGFA-231ENST00000640499 WFDC10BQ8IUB3 73 aa18.2■□□□□ 0.5
VEGFA-231ENST00000640499 GTSF1Q8WW33 167 aa18.2■□□□□ 0.5
VEGFA-231ENST00000640499 XKRY2A2RUG3 117 aa18.19■□□□□ 0.5
VEGFA-231ENST00000640499 IFITM2Q01629 132 aa18.19■□□□□ 0.5
VEGFA-231ENST00000640499 F2Z2F3 143 aa18.18■□□□□ 0.5
VEGFA-231ENST00000640499 CTRLP40313 264 aa18.18■□□□□ 0.5
VEGFA-231ENST00000640499 PEA15Q15121 130 aa18.18■□□□□ 0.5
VEGFA-231ENST00000640499 C1orf134Q5TEV5 83 aa18.18■□□□□ 0.5
VEGFA-231ENST00000640499 ATP6V0E2Q8NHE4 81 aa18.18■□□□□ 0.5
VEGFA-231ENST00000640499 DNAH11Q96DT5 4516 aa18.18■□□□□ 0.5
VEGFA-231ENST00000640499 RAB4BP61018 213 aa18.17■□□□□ 0.5
VEGFA-231ENST00000640499 CACNG7P62955 275 aa18.17■□□□□ 0.5
VEGFA-231ENST00000640499 A0A1W2PPQ1 181 aa18.16■□□□□ 0.5
VEGFA-231ENST00000640499 GATCO43716 136 aaKnown RBP18.16■□□□□ 0.5
VEGFA-231ENST00000640499 CNFNQ9BYD5 112 aa18.16■□□□□ 0.5
VEGFA-231ENST00000640499 GTSF1LQ9H1H1 148 aa18.16■□□□□ 0.5
VEGFA-231ENST00000640499 LINC00336Q6ZUF6 198 aa18.15■□□□□ 0.5
VEGFA-231ENST00000640499 C6orf223Q8N319 242 aa18.15■□□□□ 0.5
VEGFA-231ENST00000640499 SMDT1Q9H4I9 107 aa18.15■□□□□ 0.5
VEGFA-231ENST00000640499 NTF3P20783 257 aa18.14■□□□□ 0.49
VEGFA-231ENST00000640499 ERVFC1-1P60608 527 aa18.14■□□□□ 0.49
VEGFA-231ENST00000640499 TMEM241Q24JQ0 296 aa18.14■□□□□ 0.49
VEGFA-231ENST00000640499 WDR73Q6P4I2 378 aa18.14■□□□□ 0.49
VEGFA-231ENST00000640499 A0A1B0GVY2 172 aa18.13■□□□□ 0.49
VEGFA-231ENST00000640499 RPL23P62829 140 aaKnown RBP18.13■□□□□ 0.49
VEGFA-231ENST00000640499 ZNF56Q15929 161 aa18.13■□□□□ 0.49
VEGFA-231ENST00000640499 FAM74A3Q4VXF1 159 aa18.13■□□□□ 0.49
VEGFA-231ENST00000640499 TTC32Q5I0X7 151 aa18.13■□□□□ 0.49
VEGFA-231ENST00000640499 AP1S3Q96PC3 154 aa18.13■□□□□ 0.49
VEGFA-231ENST00000640499 TRBV10-1A0A0K0K1A3 114 aa18.12■□□□□ 0.49
VEGFA-231ENST00000640499 PRSS29PA6NIE9 313 aa18.12■□□□□ 0.49
VEGFA-231ENST00000640499 DNAH10OSP0CZ25 163 aa18.12■□□□□ 0.49
VEGFA-231ENST00000640499 EVI2AP22794 236 aa18.12■□□□□ 0.49
VEGFA-231ENST00000640499 LELP1Q5T871 98 aa18.12■□□□□ 0.49
VEGFA-231ENST00000640499 OR10G8Q8NGN5 311 aa18.12■□□□□ 0.49
VEGFA-231ENST00000640499 FOXA3P55318 350 aaPredicted RBP18.11■□□□□ 0.49
VEGFA-231ENST00000640499 CT83Q5H943 113 aa18.11■□□□□ 0.49
VEGFA-231ENST00000640499 NEXN-AS1Q8NBZ9 246 aa18.11■□□□□ 0.49
VEGFA-231ENST00000640499 ISOC2Q96AB3 205 aa18.11■□□□□ 0.49
VEGFA-231ENST00000640499 OSTCQ9NRP0 149 aa18.11■□□□□ 0.49
VEGFA-231ENST00000640499 DYNC1H1Q14204 4646 aaKnown RBP18.1■□□□□ 0.49
VEGFA-231ENST00000640499 UBE2D3P61077 147 aa18.1■□□□□ 0.49
VEGFA-231ENST00000640499 UBE2D2P62837 147 aa18.1■□□□□ 0.49
VEGFA-231ENST00000640499 TNFRSF18Q9Y5U5 241 aa18.1■□□□□ 0.49
VEGFA-231ENST00000640499 A8MWL6 223 aa18.09■□□□□ 0.49
VEGFA-231ENST00000640499 NAT8Q9UHE5 227 aa18.09■□□□□ 0.49
VEGFA-231ENST00000640499 V9GYV3 84 aa18.09■□□□□ 0.49
VEGFA-231ENST00000640499 TRBV7-3A0A075B6L6 115 aa18.08■□□□□ 0.48
VEGFA-231ENST00000640499 F5H697 171 aa18.08■□□□□ 0.48
VEGFA-231ENST00000640499 SOHLH1Q5JUK2 328 aa18.08■□□□□ 0.48
VEGFA-231ENST00000640499 CLLU1Q5K131 121 aa18.08■□□□□ 0.48
VEGFA-231ENST00000640499 IGHV3-38A0A0C4DH36 116 aa18.07■□□□□ 0.48
VEGFA-231ENST00000640499 SMIM17P0DL12 118 aa18.07■□□□□ 0.48
VEGFA-231ENST00000640499 RAB14P61106 215 aa18.07■□□□□ 0.48
VEGFA-231ENST00000640499 TNP2Q05952 138 aa18.07■□□□□ 0.48
VEGFA-231ENST00000640499 PGLYRP4Q96LB8 373 aa18.07■□□□□ 0.48
VEGFA-231ENST00000640499 M0QY20 66 aa18.06■□□□□ 0.48
VEGFA-231ENST00000640499 RPL36AP83881 106 aaKnown RBP18.06■□□□□ 0.48
VEGFA-231ENST00000640499 TWIST1Q15672 202 aa18.06■□□□□ 0.48
VEGFA-231ENST00000640499 OR10J3Q5JRS4 329 aa18.06■□□□□ 0.48
VEGFA-231ENST00000640499 SUMO4Q6EEV6 95 aa18.06■□□□□ 0.48
VEGFA-231ENST00000640499 Q6ZRN7 208 aaPredicted RBP18.06■□□□□ 0.48
VEGFA-231ENST00000640499 TSKUQ8WUA8 353 aa18.06■□□□□ 0.48
VEGFA-231ENST00000640499 RPL36ALQ969Q0 106 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms