RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 TRACP01848 142 aa11.36□□□□□ -0.59
HNRNPU-226ENST00000640218 LINC00173Q6ZV60 143 aa11.36□□□□□ -0.59
HNRNPU-226ENST00000640218 Q8N7P7 452 aa11.36□□□□□ -0.59
HNRNPU-226ENST00000640218 TEX22C9J3V5 150 aa11.36□□□□□ -0.59
HNRNPU-226ENST00000640218 CCL25O15444 150 aa11.36□□□□□ -0.59
HNRNPU-226ENST00000640218 Q6ZSR3 168 aa11.36□□□□□ -0.59
HNRNPU-226ENST00000640218 SMAD5-AS1Q9Y6J3 95 aa11.36□□□□□ -0.59
HNRNPU-226ENST00000640218 TIRAPP58753 221 aa11.36□□□□□ -0.59
HNRNPU-226ENST00000640218 HHLA3Q9XRX5 114 aa11.36□□□□□ -0.59
HNRNPU-226ENST00000640218 A0A1W2PNU3 283 aaPredicted RBP11.35□□□□□ -0.59
HNRNPU-226ENST00000640218 TIMM17AQ99595 171 aa11.35□□□□□ -0.59
HNRNPU-226ENST00000640218 SND1-IT1Q9HBX3 110 aa11.35□□□□□ -0.59
HNRNPU-226ENST00000640218 DEFB1P60022 68 aa11.35□□□□□ -0.59
HNRNPU-226ENST00000640218 RPL39P62891 51 aaKnown RBP11.35□□□□□ -0.59
HNRNPU-226ENST00000640218 CDPF1Q6NVV7 123 aa11.34□□□□□ -0.59
HNRNPU-226ENST00000640218 SH2D6Q7Z4S9 175 aa11.34□□□□□ -0.59
HNRNPU-226ENST00000640218 MUSTN1Q8IVN3 82 aa11.34□□□□□ -0.59
HNRNPU-226ENST00000640218 COX7B2Q8TF08 81 aa11.34□□□□□ -0.59
HNRNPU-226ENST00000640218 FAM167A-AS1Q96KT0 104 aa11.34□□□□□ -0.59
HNRNPU-226ENST00000640218 E7EUB6 86 aa11.34□□□□□ -0.59
HNRNPU-226ENST00000640218 Q6ZVH6 145 aa11.34□□□□□ -0.59
HNRNPU-226ENST00000640218 IGHV4-28A0A0C4DH34 117 aa11.34□□□□□ -0.59
HNRNPU-226ENST00000640218 M0R2N4 97 aa11.34□□□□□ -0.59
HNRNPU-226ENST00000640218 DAZAP2Q15038 168 aaPredicted RBP11.34□□□□□ -0.59
HNRNPU-226ENST00000640218 C9orf47Q6ZRZ4 202 aa11.34□□□□□ -0.59
HNRNPU-226ENST00000640218 GTSF1Q8WW33 167 aa11.34□□□□□ -0.59
HNRNPU-226ENST00000640218 ODF3L1Q8IXM7 274 aa11.33□□□□□ -0.6
HNRNPU-226ENST00000640218 TRBV7-3A0A075B6L6 115 aa11.33□□□□□ -0.6
HNRNPU-226ENST00000640218 DEFB135Q30KP9 77 aa11.33□□□□□ -0.6
HNRNPU-226ENST00000640218 NUPR1O60356 82 aa11.33□□□□□ -0.6
HNRNPU-226ENST00000640218 K7EMT4 169 aa11.32□□□□□ -0.6
HNRNPU-226ENST00000640218 DAND5Q8N907 189 aa11.32□□□□□ -0.6
HNRNPU-226ENST00000640218 PLA2G2EQ9NZK7 142 aa11.32□□□□□ -0.6
HNRNPU-226ENST00000640218 PKIGQ9Y2B9 76 aa11.32□□□□□ -0.6
HNRNPU-226ENST00000640218 IGLV1-47P01700 117 aa11.32□□□□□ -0.6
HNRNPU-226ENST00000640218 PRB2P02812 416 aaPredicted RBP11.32□□□□□ -0.6
HNRNPU-226ENST00000640218 WISP2O76076 250 aa11.32□□□□□ -0.6
HNRNPU-226ENST00000640218 C4orf3Q8WVX3 66 aa11.32□□□□□ -0.6
HNRNPU-226ENST00000640218 SPANXDQ9BXN6 97 aa11.32□□□□□ -0.6
HNRNPU-226ENST00000640218 GPHB5Q86YW7 130 aa11.31□□□□□ -0.6
HNRNPU-226ENST00000640218 ANKRD39Q53RE8 183 aa11.31□□□□□ -0.6
HNRNPU-226ENST00000640218 FUSP35637 526 aaKnown RBP eCLIP11.31□□□□□ -0.62e-6■□□□□ 8.5
HNRNPU-226ENST00000640218 MRPL36Q9P0J6 103 aaKnown RBP11.31□□□□□ -0.6
HNRNPU-226ENST00000640218 NCR3O14931 201 aa11.31□□□□□ -0.6
HNRNPU-226ENST00000640218 MUC6Q6W4X9 2439 aa11.31□□□□□ -0.6
HNRNPU-226ENST00000640218 A4D1N5 150 aa11.31□□□□□ -0.6
HNRNPU-226ENST00000640218 IGLV2-14P01704 120 aa11.31□□□□□ -0.6
HNRNPU-226ENST00000640218 TRBV12-3P01733 135 aa11.31□□□□□ -0.6
HNRNPU-226ENST00000640218 IL17DQ8TAD2 202 aa11.3□□□□□ -0.6
HNRNPU-226ENST00000640218 C2orf16Q68DN1 1984 aa11.3□□□□□ -0.6
HNRNPU-226ENST00000640218 MYCNOSP40205 109 aa11.3□□□□□ -0.6
HNRNPU-226ENST00000640218 IGHG2P01859 326 aa11.3□□□□□ -0.6
HNRNPU-226ENST00000640218 BAALCQ8WXS3 180 aa11.3□□□□□ -0.6
HNRNPU-226ENST00000640218 FANCD2OSQ96PS1 177 aa11.3□□□□□ -0.6
HNRNPU-226ENST00000640218 ARHGAP21Q5T5U3 1957 aa11.3□□□□□ -0.6
HNRNPU-226ENST00000640218 ZFHX2Q9C0A1 2572 aaPredicted RBP11.3□□□□□ -0.6
HNRNPU-226ENST00000640218 SIRPDQ9H106 197 aa11.3□□□□□ -0.6
HNRNPU-226ENST00000640218 DENND4AQ7Z401 1863 aa11.29□□□□□ -0.6
HNRNPU-226ENST00000640218 LINC01545Q5VT33 79 aa11.29□□□□□ -0.6
HNRNPU-226ENST00000640218 UNQ9165/PRO28630Q6UXU0 137 aa11.29□□□□□ -0.6
HNRNPU-226ENST00000640218 LYPD6Q86Y78 171 aa11.29□□□□□ -0.6
HNRNPU-226ENST00000640218 MSMPQ1L6U9 139 aa11.28□□□□□ -0.6
HNRNPU-226ENST00000640218 TNCP24821 2201 aa11.28□□□□□ -0.6
HNRNPU-226ENST00000640218 OBSL1O75147 1896 aa11.28□□□□□ -0.6
HNRNPU-226ENST00000640218 SPRY4Q9C004 299 aa11.28□□□□□ -0.6
HNRNPU-226ENST00000640218 DEFB125Q8N687 156 aa11.28□□□□□ -0.6
HNRNPU-226ENST00000640218 OPRPNQ99935 248 aaPredicted RBP11.28□□□□□ -0.6
HNRNPU-226ENST00000640218 NDUFA1O15239 70 aa11.28□□□□□ -0.6
HNRNPU-226ENST00000640218 LY6G6DO95868 133 aa11.28□□□□□ -0.6
HNRNPU-226ENST00000640218 TNRC6AQ8NDV7 1962 aaKnown RBP11.28□□□□□ -0.6
HNRNPU-226ENST00000640218 TOMM6Q96B49 74 aa11.28□□□□□ -0.6
HNRNPU-226ENST00000640218 PRORYQ9H606 182 aa11.28□□□□□ -0.6
HNRNPU-226ENST00000640218 H0YGX0 51 aa11.27□□□□□ -0.6
HNRNPU-226ENST00000640218 MDFICQ9P1T7 246 aa11.27□□□□□ -0.6
HNRNPU-226ENST00000640218 PTPRQQ9UMZ3 2332 aa11.27□□□□□ -0.6
HNRNPU-226ENST00000640218 VSIG2Q96IQ7 327 aa11.27□□□□□ -0.61
HNRNPU-226ENST00000640218 FAM208BQ5VWN6 2430 aa11.27□□□□□ -0.61
HNRNPU-226ENST00000640218 TDRG1Q3Y452 100 aa11.27□□□□□ -0.61
HNRNPU-226ENST00000640218 CLPSL1A2RUU4 121 aa11.27□□□□□ -0.61
HNRNPU-226ENST00000640218 RBM3P98179 157 aaKnown RBP11.27□□□□□ -0.61
HNRNPU-226ENST00000640218 WFDC11Q8NEX6 87 aa11.27□□□□□ -0.61
HNRNPU-226ENST00000640218 KLK12Q9UKR0 248 aa11.27□□□□□ -0.61
HNRNPU-226ENST00000640218 KIR2DL5BA0A0G2JN68 375 aa11.26□□□□□ -0.61
HNRNPU-226ENST00000640218 KIR2DL5BA0A0G2JPC4 375 aa11.26□□□□□ -0.61
HNRNPU-226ENST00000640218 KIR2DL5AQ8N109 375 aa11.26□□□□□ -0.61
HNRNPU-226ENST00000640218 PROP1O75360 226 aa11.26□□□□□ -0.61
HNRNPU-226ENST00000640218 Q8NA96 180 aa11.26□□□□□ -0.61
HNRNPU-226ENST00000640218 FAM110AQ9BQ89 295 aa11.26□□□□□ -0.61
HNRNPU-226ENST00000640218 PLA2G2AP14555 144 aa11.26□□□□□ -0.61
HNRNPU-226ENST00000640218 UBE2AP49459 152 aa11.26□□□□□ -0.61
HNRNPU-226ENST00000640218 TMEM89A2RUT3 159 aa11.26□□□□□ -0.61
HNRNPU-226ENST00000640218 TTTY13Q9BZ97 58 aa11.26□□□□□ -0.61
HNRNPU-226ENST00000640218 HIST2H2BDQ6DRA6 164 aa11.25□□□□□ -0.61
HNRNPU-226ENST00000640218 TMEM61Q8N0U2 210 aa11.25□□□□□ -0.61
HNRNPU-226ENST00000640218 COA6Q5JTJ3 125 aaKnown RBP11.25□□□□□ -0.61
HNRNPU-226ENST00000640218 A6NDX4 124 aa11.25□□□□□ -0.61
HNRNPU-226ENST00000640218 FREM1Q5H8C1 2179 aa11.25□□□□□ -0.61
HNRNPU-226ENST00000640218 OTOGLQ3ZCN5 2332 aa11.25□□□□□ -0.61
HNRNPU-226ENST00000640218 IGLV2-18A0A075B6J9 118 aa11.25□□□□□ -0.61
HNRNPU-226ENST00000640218 CTRLP40313 264 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms