RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 USF3Q68DE3 2245 aa13.24□□□□□ -0.29
CACNA1A-253ENST00000637927 BVES-AS1Q5T3Y7 98 aa13.24□□□□□ -0.29
CACNA1A-253ENST00000637927 C11orf45Q8TAV5 145 aa13.24□□□□□ -0.29
CACNA1A-253ENST00000637927 A0A1W2PPM0 123 aa13.23□□□□□ -0.29
CACNA1A-253ENST00000637927 IGHV2-5P01817 119 aa13.23□□□□□ -0.29
CACNA1A-253ENST00000637927 NDUFA1O15239 70 aa13.23□□□□□ -0.29
CACNA1A-253ENST00000637927 J3QLI3 93 aa13.23□□□□□ -0.29
CACNA1A-253ENST00000637927 C12orf74Q32Q52 190 aa13.23□□□□□ -0.29
CACNA1A-253ENST00000637927 FOXI2Q6ZQN5 318 aa13.23□□□□□ -0.29
CACNA1A-253ENST00000637927 Q8TCH9 128 aa13.23□□□□□ -0.29
CACNA1A-253ENST00000637927 FHL1Q13642 323 aa13.22□□□□□ -0.29
CACNA1A-253ENST00000637927 Q8N9W7 124 aa13.22□□□□□ -0.29
CACNA1A-253ENST00000637927 TMEM263Q8WUH6 116 aaKnown RBP13.22□□□□□ -0.29
CACNA1A-253ENST00000637927 LINC01559Q495D7 138 aa13.22□□□□□ -0.29
CACNA1A-253ENST00000637927 FAM236AA0A1B0GUQ0 79 aa13.22□□□□□ -0.29
CACNA1A-253ENST00000637927 FAM236BA0A1B0GV22 79 aa13.22□□□□□ -0.29
CACNA1A-253ENST00000637927 SLPIP03973 132 aa13.22□□□□□ -0.29
CACNA1A-253ENST00000637927 INAFM1C9JVW0 142 aa13.21□□□□□ -0.29
CACNA1A-253ENST00000637927 SPAG11BQ08648 103 aa13.21□□□□□ -0.29
CACNA1A-253ENST00000637927 OPRPNQ99935 248 aaPredicted RBP13.21□□□□□ -0.29
CACNA1A-253ENST00000637927 FOXL2NBQ6ZUU3 175 aa13.21□□□□□ -0.3
CACNA1A-253ENST00000637927 C9orf85Q96MD7 179 aa13.21□□□□□ -0.3
CACNA1A-253ENST00000637927 C15orf65H3BRN8 121 aa13.2□□□□□ -0.3
CACNA1A-253ENST00000637927 TRBV12-3P01733 135 aa13.2□□□□□ -0.3
CACNA1A-253ENST00000637927 ZNF493Q6ZR52 646 aa13.2□□□□□ -0.3
CACNA1A-253ENST00000637927 ATRXP46100 2492 aa13.2□□□□□ -0.3
CACNA1A-253ENST00000637927 IGLC7A0M8Q6 106 aa13.2□□□□□ -0.3
CACNA1A-253ENST00000637927 CTSZQ9UBR2 303 aa13.2□□□□□ -0.3
CACNA1A-253ENST00000637927 USP17L23D6RBM5 183 aa13.2□□□□□ -0.3
CACNA1A-253ENST00000637927 FXYD5Q96DB9 178 aa13.19□□□□□ -0.3
CACNA1A-253ENST00000637927 CRYGDP07320 174 aa13.19□□□□□ -0.3
CACNA1A-253ENST00000637927 K7EP13 123 aa13.19□□□□□ -0.3
CACNA1A-253ENST00000637927 IGLL1P15814 213 aa13.19□□□□□ -0.3
CACNA1A-253ENST00000637927 NDUFC2O95298 119 aa13.19□□□□□ -0.3
CACNA1A-253ENST00000637927 TRBV10-2A0A0K0K1G8 114 aa13.18□□□□□ -0.3
CACNA1A-253ENST00000637927 LINC00482Q8N8I6 264 aa13.18□□□□□ -0.3
CACNA1A-253ENST00000637927 POM121L12Q8N7R1 296 aa13.18□□□□□ -0.3
CACNA1A-253ENST00000637927 LINC00526Q96FQ7 95 aa13.18□□□□□ -0.3
CACNA1A-253ENST00000637927 K7ERS5 55 aa13.18□□□□□ -0.3
CACNA1A-253ENST00000637927 DIRC1Q969H9 104 aa13.18□□□□□ -0.3
CACNA1A-253ENST00000637927 ZNF492Q9P255 531 aa13.18□□□□□ -0.3
CACNA1A-253ENST00000637927 V9GYV3 84 aa13.18□□□□□ -0.3
CACNA1A-253ENST00000637927 Q6ZWC4 215 aa13.17□□□□□ -0.3
CACNA1A-253ENST00000637927 FNDC10F2Z333 226 aa13.17□□□□□ -0.3
CACNA1A-253ENST00000637927 LINC00269Q8N2A0 174 aa13.17□□□□□ -0.3
CACNA1A-253ENST00000637927 PLA2G2CQ5R387 149 aa13.17□□□□□ -0.3
CACNA1A-253ENST00000637927 SMIM20Q8N5G0 67 aa13.17□□□□□ -0.3
CACNA1A-253ENST00000637927 Q8NFD4 153 aa13.16□□□□□ -0.3
CACNA1A-253ENST00000637927 CFC1BP0CG36 223 aa13.16□□□□□ -0.3
CACNA1A-253ENST00000637927 CFC1P0CG37 223 aa13.16□□□□□ -0.3
CACNA1A-253ENST00000637927 CT83Q5H943 113 aa13.16□□□□□ -0.3
CACNA1A-253ENST00000637927 F8VRH5 84 aa13.16□□□□□ -0.3
CACNA1A-253ENST00000637927 F8W1H4 67 aa13.16□□□□□ -0.3
CACNA1A-253ENST00000637927 A0A0J9YXV3 536 aa13.16□□□□□ -0.3
CACNA1A-253ENST00000637927 IGFL3Q6UXB1 125 aa13.16□□□□□ -0.3
CACNA1A-253ENST00000637927 IGKV2-28A0A075B6P5 120 aa13.16□□□□□ -0.3
CACNA1A-253ENST00000637927 FAM236DA0A1B0GTK5 79 aa13.16□□□□□ -0.3
CACNA1A-253ENST00000637927 A4D1N5 150 aa13.16□□□□□ -0.3
CACNA1A-253ENST00000637927 K7EP34 96 aa13.16□□□□□ -0.3
CACNA1A-253ENST00000637927 IGKV2D-28P01615 120 aa13.16□□□□□ -0.3
CACNA1A-253ENST00000637927 FAM236CP0DP71 79 aa13.16□□□□□ -0.3
CACNA1A-253ENST00000637927 Q8N1Y9 231 aa13.16□□□□□ -0.3
CACNA1A-253ENST00000637927 C3orf84H3BNL1 204 aa13.15□□□□□ -0.3
CACNA1A-253ENST00000637927 PLA2G2AP14555 144 aa13.15□□□□□ -0.3
CACNA1A-253ENST00000637927 K7EN84 100 aa13.15□□□□□ -0.3
CACNA1A-253ENST00000637927 LYL1P12980 280 aa13.15□□□□□ -0.3
CACNA1A-253ENST00000637927 MSRB1Q9NZV6 116 aa13.15□□□□□ -0.3
CACNA1A-253ENST00000637927 IGLC1P0CG04 106 aa13.15□□□□□ -0.3
CACNA1A-253ENST00000637927 ANAPC1Q9H1A4 1944 aa13.15□□□□□ -0.31
CACNA1A-253ENST00000637927 RPL37AP8A6NKH3 93 aa13.14□□□□□ -0.31
CACNA1A-253ENST00000637927 Q6ZS49 121 aa13.14□□□□□ -0.31
CACNA1A-253ENST00000637927 NOTCH3Q9UM47 2321 aa13.14□□□□□ -0.31
CACNA1A-253ENST00000637927 NLRC5Q86WI3 1866 aa13.14□□□□□ -0.31
CACNA1A-253ENST00000637927 CENPVL3A0A0U1RRI6 287 aa13.14□□□□□ -0.31
CACNA1A-253ENST00000637927 IGHV2-70P01814 119 aa13.14□□□□□ -0.31
CACNA1A-253ENST00000637927 PLA2G2EQ9NZK7 142 aa13.14□□□□□ -0.31
CACNA1A-253ENST00000637927 ROS1P08922 2347 aa13.14□□□□□ -0.31
CACNA1A-253ENST00000637927 MIR7-3HGQ8N6C7 128 aa13.13□□□□□ -0.31
CACNA1A-253ENST00000637927 ACACAQ13085 2346 aa13.13□□□□□ -0.31
CACNA1A-253ENST00000637927 PLXNA2O75051 1894 aa13.13□□□□□ -0.31
CACNA1A-253ENST00000637927 LOXL1Q08397 574 aaPredicted RBP13.13□□□□□ -0.31
CACNA1A-253ENST00000637927 IGLV2-8P01709 118 aa13.13□□□□□ -0.31
CACNA1A-253ENST00000637927 CRYGBP07316 175 aa13.13□□□□□ -0.31
CACNA1A-253ENST00000637927 IGLV1-44P01699 117 aa13.12□□□□□ -0.31
CACNA1A-253ENST00000637927 TTTY13Q9BZ97 58 aa13.12□□□□□ -0.31
CACNA1A-253ENST00000637927 TNCP24821 2201 aa13.12□□□□□ -0.31
CACNA1A-253ENST00000637927 COX8AP10176 69 aa13.12□□□□□ -0.31
CACNA1A-253ENST00000637927 PYGO2Q9BRQ0 406 aa13.12□□□□□ -0.31
CACNA1A-253ENST00000637927 AGPAT4-IT1Q9H0P7 198 aa13.12□□□□□ -0.31
CACNA1A-253ENST00000637927 XAGE1AQ9HD64 81 aa13.11□□□□□ -0.31
CACNA1A-253ENST00000637927 LINC00173Q6ZV60 143 aa13.11□□□□□ -0.31
CACNA1A-253ENST00000637927 TP53TG3Q9ULZ0 132 aa13.11□□□□□ -0.31
CACNA1A-253ENST00000637927 UBE2D2P62837 147 aa13.11□□□□□ -0.31
CACNA1A-253ENST00000637927 PKIGQ9Y2B9 76 aa13.1□□□□□ -0.31
CACNA1A-253ENST00000637927 A0A0B4J2C4 111 aa13.1□□□□□ -0.31
CACNA1A-253ENST00000637927 IGLV2-11P01706 119 aa13.1□□□□□ -0.31
CACNA1A-253ENST00000637927 RSPO1Q2MKA7 263 aaPredicted RBP13.1□□□□□ -0.31
CACNA1A-253ENST00000637927 SPINK1P00995 79 aa13.09□□□□□ -0.31
CACNA1A-253ENST00000637927 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-253ENST00000637927 UPK3BQ9BT76 320 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms