RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 Q0VG73 95 aa8.47□□□□□ -1.05
CLN6-223ENST00000637823 ORMDL3Q8N138 153 aa8.47□□□□□ -1.05
CLN6-223ENST00000637823 POM121L12Q8N7R1 296 aa8.47□□□□□ -1.05
CLN6-223ENST00000637823 MRAP2Q96G30 205 aa8.47□□□□□ -1.05
CLN6-223ENST00000637823 JPT2Q9H910 190 aa8.47□□□□□ -1.05
CLN6-223ENST00000637823 NBEAL2Q6ZNJ1 2754 aa8.46□□□□□ -1.05
CLN6-223ENST00000637823 NOTCH1P46531 2555 aa8.46□□□□□ -1.05
CLN6-223ENST00000637823 NBEAL1Q6ZS30 2694 aa8.46□□□□□ -1.06
CLN6-223ENST00000637823 D6R8Y8 96 aa8.46□□□□□ -1.06
CLN6-223ENST00000637823 CRYGDP07320 174 aa8.46□□□□□ -1.06
CLN6-223ENST00000637823 LINC00315P59091 139 aa8.46□□□□□ -1.06
CLN6-223ENST00000637823 OR10J3Q5JRS4 329 aa8.46□□□□□ -1.06
CLN6-223ENST00000637823 OR11H2Q8NH07 326 aa8.46□□□□□ -1.06
CLN6-223ENST00000637823 TP53TG1Q9Y2A0 90 aa8.46□□□□□ -1.06
CLN6-223ENST00000637823 A0A087WWL8 130 aa8.45□□□□□ -1.06
CLN6-223ENST00000637823 TRGV1A0A0A0MS02 117 aa8.45□□□□□ -1.06
CLN6-223ENST00000637823 RS1O15537 224 aa8.45□□□□□ -1.06
CLN6-223ENST00000637823 MGPP08493 103 aa8.45□□□□□ -1.06
CLN6-223ENST00000637823 MIFP14174 115 aa8.45□□□□□ -1.06
CLN6-223ENST00000637823 COA6Q5JTJ3 125 aaKnown RBP8.45□□□□□ -1.06
CLN6-223ENST00000637823 PRELID3AQ96N28 172 aa8.45□□□□□ -1.06
CLN6-223ENST00000637823 NOP10Q9NPE3 64 aaKnown RBP8.45□□□□□ -1.06
CLN6-223ENST00000637823 MRPL16Q9NX20 251 aaKnown RBP8.45□□□□□ -1.06
CLN6-223ENST00000637823 LAMTOR2Q9Y2Q5 125 aa8.45□□□□□ -1.06
CLN6-223ENST00000637823 K7EIL1 84 aa8.44□□□□□ -1.06
CLN6-223ENST00000637823 CFAP126Q5VTH2 177 aa8.44□□□□□ -1.06
CLN6-223ENST00000637823 C18orf32Q8TCD1 76 aa8.44□□□□□ -1.06
CLN6-223ENST00000637823 SAMD10Q9BYL1 202 aa8.44□□□□□ -1.06
CLN6-223ENST00000637823 MGAM2Q2M2H8 2515 aa8.44□□□□□ -1.06
CLN6-223ENST00000637823 C5orf52A6NGY3 159 aa8.43□□□□□ -1.06
CLN6-223ENST00000637823 F5H697 171 aa8.43□□□□□ -1.06
CLN6-223ENST00000637823 SMKR1H3BMG3 65 aa8.43□□□□□ -1.06
CLN6-223ENST00000637823 RHODO00212 210 aa8.43□□□□□ -1.06
CLN6-223ENST00000637823 PPP1R17O96001 155 aa8.43□□□□□ -1.06
CLN6-223ENST00000637823 PRB2P02812 416 aaPredicted RBP8.43□□□□□ -1.06
CLN6-223ENST00000637823 HOXA5P20719 270 aa8.43□□□□□ -1.06
CLN6-223ENST00000637823 SNRPEP62304 92 aaKnown RBP8.43□□□□□ -1.06
CLN6-223ENST00000637823 FAM74A4Q5TZK3 123 aa8.43□□□□□ -1.06
CLN6-223ENST00000637823 UFSP1Q6NVU6 142 aa8.43□□□□□ -1.06
CLN6-223ENST00000637823 ZFP2Q6ZN57 461 aa8.43□□□□□ -1.06
CLN6-223ENST00000637823 Q6ZTI0 123 aa8.43□□□□□ -1.06
CLN6-223ENST00000637823 BAGE3Q86Y29 109 aa8.43□□□□□ -1.06
CLN6-223ENST00000637823 TRAV26-2A0A0B4J265 109 aa8.42□□□□□ -1.06
CLN6-223ENST00000637823 CIDEAO60543 219 aa8.42□□□□□ -1.06
CLN6-223ENST00000637823 TNFRSF6BO95407 300 aa8.42□□□□□ -1.06
CLN6-223ENST00000637823 NCR2O95944 276 aa8.42□□□□□ -1.06
CLN6-223ENST00000637823 EMP1P54849 157 aa8.42□□□□□ -1.06
CLN6-223ENST00000637823 DEFB121Q5J5C9 76 aa8.42□□□□□ -1.06
CLN6-223ENST00000637823 OR4C5Q8NGB2 326 aa8.42□□□□□ -1.06
CLN6-223ENST00000637823 TRAV4A0A0B4J268 109 aa8.41□□□□□ -1.06
CLN6-223ENST00000637823 IGHV4-28A0A0C4DH34 117 aa8.41□□□□□ -1.06
CLN6-223ENST00000637823 LYRM9A8MSI8 78 aa8.41□□□□□ -1.06
CLN6-223ENST00000637823 PRSS47A8MTI9 375 aa8.41□□□□□ -1.06
CLN6-223ENST00000637823 GAS8-AS1O95177 125 aa8.41□□□□□ -1.06
CLN6-223ENST00000637823 NPYP01303 97 aa8.41□□□□□ -1.06
CLN6-223ENST00000637823 GATA1P15976 413 aaPredicted RBP8.41□□□□□ -1.06
CLN6-223ENST00000637823 ZNF56Q15929 161 aa8.41□□□□□ -1.06
CLN6-223ENST00000637823 IQCJQ1A5X6 159 aa8.41□□□□□ -1.06
CLN6-223ENST00000637823 SUMO4Q6EEV6 95 aa8.41□□□□□ -1.06
CLN6-223ENST00000637823 NIT1Q86X76 327 aa8.41□□□□□ -1.06
CLN6-223ENST00000637823 NRACQ8N912 160 aa8.41□□□□□ -1.06
CLN6-223ENST00000637823 Q8NAQ8 132 aa8.41□□□□□ -1.06
CLN6-223ENST00000637823 TRGV2A0A075B6R0 118 aa8.4□□□□□ -1.06
CLN6-223ENST00000637823 GAGE12BA1L429 117 aa8.4□□□□□ -1.06
CLN6-223ENST00000637823 H7C1H1 209 aa8.4□□□□□ -1.06
CLN6-223ENST00000637823 GAGE7O76087 117 aa8.4□□□□□ -1.06
CLN6-223ENST00000637823 GAGE12FP0CL80 117 aa8.4□□□□□ -1.06
CLN6-223ENST00000637823 GAGE12GP0CL81 117 aa8.4□□□□□ -1.06
CLN6-223ENST00000637823 GAGE12IP0CL82 117 aa8.4□□□□□ -1.06
CLN6-223ENST00000637823 LINC00612Q8N6U2 182 aa8.4□□□□□ -1.06
CLN6-223ENST00000637823 PRSS3P2Q8NHM4 247 aa8.4□□□□□ -1.06
CLN6-223ENST00000637823 C20orf78Q9BR46 151 aa8.4□□□□□ -1.06
CLN6-223ENST00000637823 MAP1LC3AQ9H492 121 aa8.4□□□□□ -1.06
CLN6-223ENST00000637823 EDA2RQ9HAV5 297 aa8.4□□□□□ -1.06
CLN6-223ENST00000637823 IGHV3-73A0A0B4J1V6 119 aa8.39□□□□□ -1.07
CLN6-223ENST00000637823 M0QY20 66 aa8.39□□□□□ -1.07
CLN6-223ENST00000637823 SERF1AO75920 110 aa8.39□□□□□ -1.07
CLN6-223ENST00000637823 IGHV3-53P01767 116 aa8.39□□□□□ -1.07
CLN6-223ENST00000637823 LINC00614P0C842 121 aa8.39□□□□□ -1.07
CLN6-223ENST00000637823 ESDP10768 282 aa8.39□□□□□ -1.07
CLN6-223ENST00000637823 SBSPONQ8IVN8 264 aa8.39□□□□□ -1.07
CLN6-223ENST00000637823 CHCHD1Q96BP2 118 aaKnown RBP8.39□□□□□ -1.07
CLN6-223ENST00000637823 C18orf15Q96N68 181 aa8.39□□□□□ -1.07
CLN6-223ENST00000637823 LOC389332A0A1B0GUA5 103 aa8.38□□□□□ -1.07
CLN6-223ENST00000637823 FAM222AQ5U5X8 452 aa8.38□□□□□ -1.07
CLN6-223ENST00000637823 HIST3H2BBQ8N257 126 aa8.38□□□□□ -1.07
CLN6-223ENST00000637823 RPL39LQ96EH5 51 aaKnown RBP8.38□□□□□ -1.07
CLN6-223ENST00000637823 ZNF479Q96JC4 524 aa8.38□□□□□ -1.07
CLN6-223ENST00000637823 ST20Q9HBF5 79 aa8.38□□□□□ -1.07
CLN6-223ENST00000637823 NXT2Q9NPJ8 142 aaKnown RBP8.38□□□□□ -1.07
CLN6-223ENST00000637823 NIT2Q9NQR4 276 aa8.38□□□□□ -1.07
CLN6-223ENST00000637823 DKK2Q9UBU2 259 aa8.38□□□□□ -1.07
CLN6-223ENST00000637823 TRBV6-5A0A0K0K1A5 114 aa8.37□□□□□ -1.07
CLN6-223ENST00000637823 TEX48A0A1B0GUV7 120 aa8.37□□□□□ -1.07
CLN6-223ENST00000637823 DEFB4AO15263 64 aa8.37□□□□□ -1.07
CLN6-223ENST00000637823 NUPR1O60356 82 aa8.37□□□□□ -1.07
CLN6-223ENST00000637823 SPART-AS1P0CW21 52 aa8.37□□□□□ -1.07
CLN6-223ENST00000637823 DEFB130BP0DP73 79 aa8.37□□□□□ -1.07
CLN6-223ENST00000637823 DEFB130AP0DP74 79 aa8.37□□□□□ -1.07
CLN6-223ENST00000637823 PMCHP20382 165 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms