RNA–Protein interactions for RNA: ENST00000637686.1

CLN3-261, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 533 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-261ENST00000637686 TRGC1P0CF51 173 aa6.98□□□□□ -1.29
CLN3-261ENST00000637686 HTN3P15516 51 aa6.98□□□□□ -1.29
CLN3-261ENST00000637686 RASL10AQ92737 203 aa6.98□□□□□ -1.29
CLN3-261ENST00000637686 FRZBQ92765 325 aa6.98□□□□□ -1.29
CLN3-261ENST00000637686 C18orf15Q96N68 181 aa6.98□□□□□ -1.29
CLN3-261ENST00000637686 TMEM191AQ9H0A3 160 aa6.98□□□□□ -1.29
CLN3-261ENST00000637686 MDFICQ9P1T7 246 aa6.98□□□□□ -1.29
CLN3-261ENST00000637686 APLNQ9ULZ1 77 aa6.98□□□□□ -1.29
CLN3-261ENST00000637686 TGIF2-C20orf24A0A0A6YYL0 155 aa6.97□□□□□ -1.29
CLN3-261ENST00000637686 SNURFLB1AK76 121 aa6.97□□□□□ -1.29
CLN3-261ENST00000637686 CIDEAO60543 219 aa6.97□□□□□ -1.29
CLN3-261ENST00000637686 LY6G6CO95867 125 aa6.97□□□□□ -1.29
CLN3-261ENST00000637686 RAB5AP20339 215 aa6.97□□□□□ -1.29
CLN3-261ENST00000637686 NTF3P20783 257 aa6.97□□□□□ -1.29
CLN3-261ENST00000637686 SPANXN1Q5VSR9 72 aa6.97□□□□□ -1.29
CLN3-261ENST00000637686 DMRTA1Q5VZB9 504 aa6.97□□□□□ -1.29
CLN3-261ENST00000637686 SMIM15Q7Z3B0 74 aa6.97□□□□□ -1.29
CLN3-261ENST00000637686 OR10AG1Q8NH19 301 aa6.97□□□□□ -1.29
CLN3-261ENST00000637686 LINC00476Q8WZB0 136 aa6.97□□□□□ -1.29
CLN3-261ENST00000637686 GSN-AS1Q9NRJ2 163 aa6.97□□□□□ -1.29
CLN3-261ENST00000637686 DNAH1Q9P2D7 4330 aa6.97□□□□□ -1.29
CLN3-261ENST00000637686 NACAE9PAV3 2078 aa6.97□□□□□ -1.29
CLN3-261ENST00000637686 ALMS1Q8TCU4 4167 aa6.96□□□□□ -1.29
CLN3-261ENST00000637686 A8MWV9 139 aa6.96□□□□□ -1.3
CLN3-261ENST00000637686 SPINK4O60575 86 aa6.96□□□□□ -1.3
CLN3-261ENST00000637686 TCTAP57738 103 aa6.96□□□□□ -1.3
CLN3-261ENST00000637686 TWIST1Q15672 202 aa6.96□□□□□ -1.3
CLN3-261ENST00000637686 LINC00612Q8N6U2 182 aa6.96□□□□□ -1.3
CLN3-261ENST00000637686 AP1S3Q96PC3 154 aa6.96□□□□□ -1.3
CLN3-261ENST00000637686 TPPP3Q9BW30 176 aa6.96□□□□□ -1.3
CLN3-261ENST00000637686 GAGE12BA1L429 117 aa6.95□□□□□ -1.3
CLN3-261ENST00000637686 GAGE7O76087 117 aa6.95□□□□□ -1.3
CLN3-261ENST00000637686 GAGE12FP0CL80 117 aa6.95□□□□□ -1.3
CLN3-261ENST00000637686 GAGE12GP0CL81 117 aa6.95□□□□□ -1.3
CLN3-261ENST00000637686 GAGE12IP0CL82 117 aa6.95□□□□□ -1.3
CLN3-261ENST00000637686 ZNF876PQ49A33 203 aa6.95□□□□□ -1.3
CLN3-261ENST00000637686 MRPL54Q6P161 138 aaKnown RBP6.95□□□□□ -1.3
CLN3-261ENST00000637686 TMEM136Q6ZRR5 245 aa6.95□□□□□ -1.3
CLN3-261ENST00000637686 Q6ZTI0 123 aa6.95□□□□□ -1.3
CLN3-261ENST00000637686 RYR3Q15413 4870 aa6.95□□□□□ -1.3
CLN3-261ENST00000637686 TRGV1A0A0A0MS02 117 aa6.94□□□□□ -1.3
CLN3-261ENST00000637686 F5H768 121 aa6.94□□□□□ -1.3
CLN3-261ENST00000637686 RHODO00212 210 aa6.94□□□□□ -1.3
CLN3-261ENST00000637686 ATP5G1P05496 136 aa6.94□□□□□ -1.3
CLN3-261ENST00000637686 FAM104BQ5XKR9 115 aa6.94□□□□□ -1.3
CLN3-261ENST00000637686 LGALS9CQ6DKI2 356 aa6.94□□□□□ -1.3
CLN3-261ENST00000637686 ZFP2Q6ZN57 461 aa6.94□□□□□ -1.3
CLN3-261ENST00000637686 POM121L12Q8N7R1 296 aa6.94□□□□□ -1.3
CLN3-261ENST00000637686 DPH3P1Q9H4G8 78 aa6.94□□□□□ -1.3
CLN3-261ENST00000637686 M0R381 172 aa6.93□□□□□ -1.3
CLN3-261ENST00000637686 PPBPP02775 128 aa6.93□□□□□ -1.3
CLN3-261ENST00000637686 CAMPP49913 170 aa6.93□□□□□ -1.3
CLN3-261ENST00000637686 TRAPPC1Q9Y5R8 145 aa6.93□□□□□ -1.3
CLN3-261ENST00000637686 KIF25-AS1Q9Y6Z4 181 aa6.93□□□□□ -1.3
CLN3-261ENST00000637686 TRGV2A0A075B6R0 118 aa6.92□□□□□ -1.3
CLN3-261ENST00000637686 TRAV4A0A0B4J268 109 aa6.92□□□□□ -1.3
CLN3-261ENST00000637686 RS1O15537 224 aa6.92□□□□□ -1.3
CLN3-261ENST00000637686 SMIM17P0DL12 118 aa6.92□□□□□ -1.3
CLN3-261ENST00000637686 RPS10P46783 165 aaKnown RBP6.92□□□□□ -1.3
CLN3-261ENST00000637686 MRAP2Q96G30 205 aa6.92□□□□□ -1.3
CLN3-261ENST00000637686 MRPL16Q9NX20 251 aaKnown RBP6.92□□□□□ -1.3
CLN3-261ENST00000637686 MSRB1Q9NZV6 116 aa6.92□□□□□ -1.3
CLN3-261ENST00000637686 LAMTOR2Q9Y2Q5 125 aa6.92□□□□□ -1.3
CLN3-261ENST00000637686 HYDINQ4G0P3 5121 aa6.91□□□□□ -1.3
CLN3-261ENST00000637686 RYR2Q92736 4967 aa6.91□□□□□ -1.3
CLN3-261ENST00000637686 PHOX2AO14813 284 aa6.91□□□□□ -1.3
CLN3-261ENST00000637686 PPP1R17O96001 155 aa6.91□□□□□ -1.3
CLN3-261ENST00000637686 APCSP02743 223 aa6.91□□□□□ -1.3
CLN3-261ENST00000637686 CRYGDP07320 174 aa6.91□□□□□ -1.3
CLN3-261ENST00000637686 RAB4AP20338 218 aa6.91□□□□□ -1.3
CLN3-261ENST00000637686 HOXA5P20719 270 aa6.91□□□□□ -1.3
CLN3-261ENST00000637686 EVI2AP22794 236 aa6.91□□□□□ -1.3
CLN3-261ENST00000637686 LINC00315P59091 139 aa6.91□□□□□ -1.3
CLN3-261ENST00000637686 RAB4BP61018 213 aa6.91□□□□□ -1.3
CLN3-261ENST00000637686 UFSP1Q6NVU6 142 aa6.91□□□□□ -1.3
CLN3-261ENST00000637686 MRPL18Q9H0U6 180 aaKnown RBP6.91□□□□□ -1.3
CLN3-261ENST00000637686 VPS13DQ5THJ4 4388 aa6.91□□□□□ -1.3
CLN3-261ENST00000637686 MUC21A0A0G2JKD1 596 aa6.9□□□□□ -1.3
CLN3-261ENST00000637686 MUC21A0A140T8X8 626 aa6.9□□□□□ -1.3
CLN3-261ENST00000637686 IGHV3-53P01767 116 aa6.9□□□□□ -1.3
CLN3-261ENST00000637686 SLAQ13239 276 aa6.9□□□□□ -1.3
CLN3-261ENST00000637686 CFAP126Q5VTH2 177 aa6.9□□□□□ -1.3
CLN3-261ENST00000637686 C15orf53Q8NAA6 179 aa6.9□□□□□ -1.3
CLN3-261ENST00000637686 RNF185Q96GF1 192 aa6.9□□□□□ -1.3
CLN3-261ENST00000637686 TRAV26-1A0A087WT03 109 aa6.89□□□□□ -1.31
CLN3-261ENST00000637686 A0A0J9YY99 117 aa6.89□□□□□ -1.31
CLN3-261ENST00000637686 C1orf196B1AJZ1 125 aa6.89□□□□□ -1.31
CLN3-261ENST00000637686 H7C1H1 209 aa6.89□□□□□ -1.31
CLN3-261ENST00000637686 NUDT3O95989 172 aa6.89□□□□□ -1.31
CLN3-261ENST00000637686 TRGC2P03986 189 aa6.89□□□□□ -1.31
CLN3-261ENST00000637686 P0DMU3 169 aa6.89□□□□□ -1.31
CLN3-261ENST00000637686 FAM231AP0DMU4 169 aa6.89□□□□□ -1.31
CLN3-261ENST00000637686 FAM231CP0DMU5 169 aa6.89□□□□□ -1.31
CLN3-261ENST00000637686 FABP9Q0Z7S8 132 aa6.89□□□□□ -1.31
CLN3-261ENST00000637686 MRPL51Q4U2R6 128 aaKnown RBP6.89□□□□□ -1.31
CLN3-261ENST00000637686 AMN1Q8IY45 258 aa6.89□□□□□ -1.31
CLN3-261ENST00000637686 ORMDL3Q8N138 153 aa6.89□□□□□ -1.31
CLN3-261ENST00000637686 C14orf178Q8N769 122 aaPredicted RBP6.89□□□□□ -1.31
CLN3-261ENST00000637686 OR4C5Q8NGB2 326 aa6.89□□□□□ -1.31
CLN3-261ENST00000637686 TRBV10-1A0A0K0K1A3 114 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms