RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 SUMO4Q6EEV6 95 aa15.16■□□□□ 0.02
CACNA1A-243ENST00000637616 CRIP2P52943 208 aaPredicted RBP15.16■□□□□ 0.02
CACNA1A-243ENST00000637616 PMVKQ15126 192 aa15.16■□□□□ 0.02
CACNA1A-243ENST00000637616 TEN1Q86WV5 123 aa15.16■□□□□ 0.02
CACNA1A-243ENST00000637616 ATP6V0E2Q8NHE4 81 aa15.16■□□□□ 0.02
CACNA1A-243ENST00000637616 UBTD1Q9HAC8 227 aa15.16■□□□□ 0.02
CACNA1A-243ENST00000637616 BRD3OSQ6XYD6 125 aa15.15■□□□□ 0.02
CACNA1A-243ENST00000637616 LENEPQ9Y5L5 61 aa15.15■□□□□ 0.02
CACNA1A-243ENST00000637616 SOCS3O14543 225 aa15.15■□□□□ 0.02
CACNA1A-243ENST00000637616 HERVK_113P61574 105 aa15.15■□□□□ 0.02
CACNA1A-243ENST00000637616 TRPT1Q86TN4 253 aaKnown RBP15.15■□□□□ 0.02
CACNA1A-243ENST00000637616 ANKRD29Q8N6D5 301 aa15.15■□□□□ 0.02
CACNA1A-243ENST00000637616 OVOL1O14753 267 aa15.15■□□□□ 0.02
CACNA1A-243ENST00000637616 PPDPFLQ8WWR9 84 aa15.15■□□□□ 0.02
CACNA1A-243ENST00000637616 KIF25-AS1Q9Y6Z4 181 aa15.15■□□□□ 0.02
CACNA1A-243ENST00000637616 NPFFO15130 113 aa15.14■□□□□ 0.01
CACNA1A-243ENST00000637616 GATA3P23771 443 aa15.14■□□□□ 0.01
CACNA1A-243ENST00000637616 FOXC1Q12948 553 aa15.14■□□□□ 0.01
CACNA1A-243ENST00000637616 SDHAF1A6NFY7 115 aa15.13■□□□□ 0.01
CACNA1A-243ENST00000637616 A8MWV9 139 aa15.13■□□□□ 0.01
CACNA1A-243ENST00000637616 FBXL19-AS1Q494R0 122 aa15.13■□□□□ 0.01
CACNA1A-243ENST00000637616 LY6EQ16553 131 aa15.13■□□□□ 0.01
CACNA1A-243ENST00000637616 C10orf126Q8N4M7 172 aa15.13■□□□□ 0.01
CACNA1A-243ENST00000637616 BPESC1Q9GZL8 116 aa15.13■□□□□ 0.01
CACNA1A-243ENST00000637616 SORL1Q92673 2214 aa15.13■□□□□ 0.01
CACNA1A-243ENST00000637616 IGKV3-20P01619 116 aa15.13■□□□□ 0.01
CACNA1A-243ENST00000637616 KLK9Q2XQG4 91 aa15.13■□□□□ 0.01
CACNA1A-243ENST00000637616 SLC25A29Q8N8R3 303 aa15.13■□□□□ 0.01
CACNA1A-243ENST00000637616 KLK9Q9UKQ9 250 aa15.13■□□□□ 0.01
CACNA1A-243ENST00000637616 TRAV12-3A0A0B4J271 114 aa15.12■□□□□ 0.01
CACNA1A-243ENST00000637616 EIF4EBP3O60516 100 aaPredicted RBP15.12■□□□□ 0.01
CACNA1A-243ENST00000637616 POLR2KP53803 58 aaKnown RBP15.12■□□□□ 0.01
CACNA1A-243ENST00000637616 PRO1854Q9UHT4 67 aa15.12■□□□□ 0.01
CACNA1A-243ENST00000637616 A4D1N5 150 aa15.11■□□□□ 0.01
CACNA1A-243ENST00000637616 J3QQQ9 107 aa15.11■□□□□ 0.01
CACNA1A-243ENST00000637616 RNF183Q96D59 192 aa15.11■□□□□ 0.01
CACNA1A-243ENST00000637616 ZNF580Q9UK33 172 aa15.11■□□□□ 0.01
CACNA1A-243ENST00000637616 CRYBG3Q68DQ2 2970 aa15.11■□□□□ 0.01
CACNA1A-243ENST00000637616 TRAV2A0A0B4J234 112 aa15.11■□□□□ 0.01
CACNA1A-243ENST00000637616 FAM159AQ6UWV7 190 aa15.11■□□□□ 0.01
CACNA1A-243ENST00000637616 AMELXQ99217 191 aa15.11■□□□□ 0.01
CACNA1A-243ENST00000637616 C9JAW5 83 aa15.1■□□□□ 0.01
CACNA1A-243ENST00000637616 FAM19A4Q96LR4 140 aa15.1■□□□□ 0.01
CACNA1A-243ENST00000637616 RHPN1-AS1Q9BWJ2 59 aa15.1■□□□□ 0.01
CACNA1A-243ENST00000637616 LGALS3P17931 250 aaKnown RBP15.1■□□□□ 0.01
CACNA1A-243ENST00000637616 VCYO14598 125 aa15.09■□□□□ 0.01
CACNA1A-243ENST00000637616 ZNF688P0C7X2 276 aa15.09■□□□□ 0.01
CACNA1A-243ENST00000637616 BEX4Q9NWD9 120 aaPredicted RBP15.09■□□□□ 0.01
CACNA1A-243ENST00000637616 TRAV12-2A0A075B6T6 113 aa15.08■□□□□ 0.01
CACNA1A-243ENST00000637616 PPP1R17O96001 155 aa15.08■□□□□ 0.01
CACNA1A-243ENST00000637616 ELANEP08246 267 aa15.08■□□□□ 0.01
CACNA1A-243ENST00000637616 ADARB2-AS1A8MUL3 147 aa15.08■□□□□ 0
CACNA1A-243ENST00000637616 K7ENP7 123 aa15.08■□□□□ 0
CACNA1A-243ENST00000637616 PF4V1P10720 104 aa15.08■□□□□ 0
CACNA1A-243ENST00000637616 LMO4P61968 165 aa15.08■□□□□ 0
CACNA1A-243ENST00000637616 ZNF876PQ49A33 203 aa15.08■□□□□ 0
CACNA1A-243ENST00000637616 LYRM7Q5U5X0 104 aa15.08■□□□□ 0
CACNA1A-243ENST00000637616 IGHV1-69DA0A0B4J2H0 117 aa15.07■□□□□ 0
CACNA1A-243ENST00000637616 FAM223BA6NKX1 122 aa15.07■□□□□ 0
CACNA1A-243ENST00000637616 FAM223AQ8IWN6 122 aa15.07■□□□□ 0
CACNA1A-243ENST00000637616 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.07■□□□□ 0
CACNA1A-243ENST00000637616 TRBV20-1A0A075B6N2 111 aa15.07■□□□□ 0
CACNA1A-243ENST00000637616 IGHV4OR15-8A0A075B7B6 117 aa15.07■□□□□ 0
CACNA1A-243ENST00000637616 A0A087WW49 117 aa15.07■□□□□ 0
CACNA1A-243ENST00000637616 NDUFA4O00483 81 aa15.07■□□□□ 0
CACNA1A-243ENST00000637616 SLC25A20O43772 301 aa15.07■□□□□ 0
CACNA1A-243ENST00000637616 PAPPA-AS1Q5QFB9 102 aa15.07■□□□□ 0
CACNA1A-243ENST00000637616 MDFICQ9P1T7 246 aa15.07■□□□□ 0
CACNA1A-243ENST00000637616 MOB4Q9Y3A3 225 aa15.07■□□□□ 0
CACNA1A-243ENST00000637616 ZNF56Q15929 161 aa15.06■□□□□ 0
CACNA1A-243ENST00000637616 MUSTN1Q8IVN3 82 aa15.06■□□□□ 0
CACNA1A-243ENST00000637616 MED14OSP0DP75 135 aa15.05■□□□□ 0
CACNA1A-243ENST00000637616 TMEM141Q96I45 108 aa15.05■□□□□ 0
CACNA1A-243ENST00000637616 HIVEP3Q5T1R4 2406 aa15.05■□□□□ -0
CACNA1A-243ENST00000637616 BLCAPP62952 87 aa15.05■□□□□ -0
CACNA1A-243ENST00000637616 Q1RN00 199 aa15.05■□□□□ -0
CACNA1A-243ENST00000637616 C19orf54Q5BKX5 351 aa15.05■□□□□ -0
CACNA1A-243ENST00000637616 SPG11Q96JI7 2443 aa15.04■□□□□ -0
CACNA1A-243ENST00000637616 IGHV4-39P01824 125 aa15.04■□□□□ -0
CACNA1A-243ENST00000637616 NBL1P41271 181 aa15.04■□□□□ -0
CACNA1A-243ENST00000637616 POM121L12Q8N7R1 296 aa15.04■□□□□ -0
CACNA1A-243ENST00000637616 SBSPONQ8IVN8 264 aa15.04■□□□□ -0
CACNA1A-243ENST00000637616 TIMM17AQ99595 171 aa15.04■□□□□ -0
CACNA1A-243ENST00000637616 CUBNO60494 3623 aa15.04■□□□□ -0
CACNA1A-243ENST00000637616 A0A0J9YXV3 536 aa15.03■□□□□ -0
CACNA1A-243ENST00000637616 NXPH4O95158 308 aa15.03■□□□□ -0
CACNA1A-243ENST00000637616 IGHV3-33P01772 117 aa15.03■□□□□ -0
CACNA1A-243ENST00000637616 CREBBPQ92793 2442 aa15.02■□□□□ -0
CACNA1A-243ENST00000637616 ABCA2Q9BZC7 2435 aa15.02■□□□□ -0
CACNA1A-243ENST00000637616 APRG1Q8IVJ8 170 aa15.02■□□□□ -0
CACNA1A-243ENST00000637616 ANAPC13Q9BS18 74 aa15.02■□□□□ -0
CACNA1A-243ENST00000637616 ERG28Q9UKR5 140 aa15.02□□□□□ -0.01
CACNA1A-243ENST00000637616 KLLNB2CW77 178 aa15.01□□□□□ -0.01
CACNA1A-243ENST00000637616 P0DMU3 169 aa15.01□□□□□ -0.01
CACNA1A-243ENST00000637616 FAM231AP0DMU4 169 aa15.01□□□□□ -0.01
CACNA1A-243ENST00000637616 FAM231CP0DMU5 169 aa15.01□□□□□ -0.01
CACNA1A-243ENST00000637616 TMEM263Q8WUH6 116 aaKnown RBP15.01□□□□□ -0.01
CACNA1A-243ENST00000637616 TRBV27A0A0K0K1C4 114 aa15.01□□□□□ -0.01
CACNA1A-243ENST00000637616 NTN5Q8WTR8 489 aaPredicted RBP15.01□□□□□ -0.01
CACNA1A-243ENST00000637616 TMEM223A0PJW6 202 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms