RNA–Protein interactions for RNA: ENST00000637540.1

SCN8A-213, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 93 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-213ENST00000637540 PET117Q6UWS5 81 aa3.5□□□□□ -1.85
SCN8A-213ENST00000637540 FAM159AQ6UWV7 190 aa3.5□□□□□ -1.85
SCN8A-213ENST00000637540 C1orf158Q8N1D5 194 aa3.5□□□□□ -1.85
SCN8A-213ENST00000637540 C14orf178Q8N769 122 aaPredicted RBP3.5□□□□□ -1.85
SCN8A-213ENST00000637540 LINC00482Q8N8I6 264 aa3.5□□□□□ -1.85
SCN8A-213ENST00000637540 C11orf72Q8NBR9 251 aa3.5□□□□□ -1.85
SCN8A-213ENST00000637540 PRSS3P2Q8NHM4 247 aa3.5□□□□□ -1.85
SCN8A-213ENST00000637540 JMJD8Q96S16 334 aa3.5□□□□□ -1.85
SCN8A-213ENST00000637540 C20orf78Q9BR46 151 aa3.5□□□□□ -1.85
SCN8A-213ENST00000637540 NDUFAF3Q9BU61 184 aa3.5□□□□□ -1.85
SCN8A-213ENST00000637540 TMEM70Q9BUB7 260 aa3.5□□□□□ -1.85
SCN8A-213ENST00000637540 MAP1LC3AQ9H492 121 aa3.5□□□□□ -1.85
SCN8A-213ENST00000637540 ZMAT4Q9H898 229 aa3.5□□□□□ -1.85
SCN8A-213ENST00000637540 EDA2RQ9HAV5 297 aa3.5□□□□□ -1.85
SCN8A-213ENST00000637540 NXT2Q9NPJ8 142 aaKnown RBP3.5□□□□□ -1.85
SCN8A-213ENST00000637540 PHLDA3Q9Y5J5 127 aa3.5□□□□□ -1.85
SCN8A-213ENST00000637540 PKD1L1Q8TDX9 2849 aa3.5□□□□□ -1.85
SCN8A-213ENST00000637540 M0QY20 66 aa3.49□□□□□ -1.85
SCN8A-213ENST00000637540 HBDP02042 147 aa3.49□□□□□ -1.85
SCN8A-213ENST00000637540 PRM2P04554 102 aa3.49□□□□□ -1.85
SCN8A-213ENST00000637540 IGLL1P15814 213 aa3.49□□□□□ -1.85
SCN8A-213ENST00000637540 S100A4P26447 101 aaKnown RBP3.49□□□□□ -1.85
SCN8A-213ENST00000637540 FXYD7P58549 80 aa3.49□□□□□ -1.85
SCN8A-213ENST00000637540 LGALS9BQ3B8N2 356 aa3.49□□□□□ -1.85
SCN8A-213ENST00000637540 LGALS9CQ6DKI2 356 aa3.49□□□□□ -1.85
SCN8A-213ENST00000637540 FA2HQ7L5A8 372 aa3.49□□□□□ -1.85
SCN8A-213ENST00000637540 CSNK1G2-AS1Q8NCQ2 148 aa3.49□□□□□ -1.85
SCN8A-213ENST00000637540 DYNLRB2Q8TF09 96 aa3.49□□□□□ -1.85
SCN8A-213ENST00000637540 RPL39LQ96EH5 51 aaKnown RBP3.49□□□□□ -1.85
SCN8A-213ENST00000637540 MIEN1Q9BRT3 115 aa3.49□□□□□ -1.85
SCN8A-213ENST00000637540 SMIM2Q9BVW6 85 aa3.49□□□□□ -1.85
SCN8A-213ENST00000637540 NBEAL2Q6ZNJ1 2754 aa3.49□□□□□ -1.85
SCN8A-213ENST00000637540 MAST4O15021 2626 aa3.48□□□□□ -1.85
SCN8A-213ENST00000637540 TRGV11A0A075B6L2 103 aa3.48□□□□□ -1.85
SCN8A-213ENST00000637540 TRAV9-2A0A087WT02 112 aa3.48□□□□□ -1.85
SCN8A-213ENST00000637540 PLAC8L1A1L4L8 177 aa3.48□□□□□ -1.85
SCN8A-213ENST00000637540 CYSRT1A8MQ03 144 aa3.48□□□□□ -1.85
SCN8A-213ENST00000637540 TSTD3H0UI37 97 aa3.48□□□□□ -1.85
SCN8A-213ENST00000637540 K7EMI3 77 aa3.48□□□□□ -1.85
SCN8A-213ENST00000637540 AZU1P20160 251 aa3.48□□□□□ -1.85
SCN8A-213ENST00000637540 SUMO2P61956 95 aaKnown RBP3.48□□□□□ -1.85
SCN8A-213ENST00000637540 NSUN5P1Q3KNT7 163 aa3.48□□□□□ -1.85
SCN8A-213ENST00000637540 SPATA45Q537H7 98 aa3.48□□□□□ -1.85
SCN8A-213ENST00000637540 SUMO4Q6EEV6 95 aa3.48□□□□□ -1.85
SCN8A-213ENST00000637540 SMIM15Q7Z3B0 74 aa3.48□□□□□ -1.85
SCN8A-213ENST00000637540 ATOH7Q8N100 152 aa3.48□□□□□ -1.85
SCN8A-213ENST00000637540 TMEM158Q8WZ71 300 aa3.48□□□□□ -1.85
SCN8A-213ENST00000637540 AP1S3Q96PC3 154 aa3.48□□□□□ -1.85
SCN8A-213ENST00000637540 CITED1Q99966 193 aa3.48□□□□□ -1.85
SCN8A-213ENST00000637540 MCRIP2Q9BUT9 160 aaKnown RBP3.48□□□□□ -1.85
SCN8A-213ENST00000637540 VAMP8Q9BV40 100 aa3.48□□□□□ -1.85
SCN8A-213ENST00000637540 MAP1LC3CQ9BXW4 147 aa3.48□□□□□ -1.85
SCN8A-213ENST00000637540 HSPB8Q9UJY1 196 aa3.48□□□□□ -1.85
SCN8A-213ENST00000637540 PAM16Q9Y3D7 125 aa3.48□□□□□ -1.85
SCN8A-213ENST00000637540 FBN1P35555 2871 aaKnown RBP3.47□□□□□ -1.85
SCN8A-213ENST00000637540 TRBV27A0A0K0K1C4 114 aa3.47□□□□□ -1.85
SCN8A-213ENST00000637540 C20orf202A1L168 122 aa3.47□□□□□ -1.85
SCN8A-213ENST00000637540 OR11H12B2RN74 326 aa3.47□□□□□ -1.85
SCN8A-213ENST00000637540 TCAPO15273 167 aa3.47□□□□□ -1.85
SCN8A-213ENST00000637540 RS1O15537 224 aa3.47□□□□□ -1.85
SCN8A-213ENST00000637540 WIPF1O43516 503 aa3.47□□□□□ -1.85
SCN8A-213ENST00000637540 SMIM17P0DL12 118 aa3.47□□□□□ -1.85
SCN8A-213ENST00000637540 P0DMU3 169 aa3.47□□□□□ -1.85
SCN8A-213ENST00000637540 FAM231AP0DMU4 169 aa3.47□□□□□ -1.85
SCN8A-213ENST00000637540 FAM231CP0DMU5 169 aa3.47□□□□□ -1.85
SCN8A-213ENST00000637540 CMC4P56277 68 aaPredicted RBP3.47□□□□□ -1.85
SCN8A-213ENST00000637540 RIPPLY3P57055 190 aa3.47□□□□□ -1.85
SCN8A-213ENST00000637540 LAGE3Q14657 143 aa3.47□□□□□ -1.85
SCN8A-213ENST00000637540 ODF1Q14990 250 aa3.47□□□□□ -1.85
SCN8A-213ENST00000637540 Q6ZSN1 163 aa3.47□□□□□ -1.85
SCN8A-213ENST00000637540 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.47□□□□□ -1.85
SCN8A-213ENST00000637540 WFDC9Q8NEX5 89 aa3.47□□□□□ -1.85
SCN8A-213ENST00000637540 RNASE8Q8TDE3 154 aaKnown RBP3.47□□□□□ -1.85
SCN8A-213ENST00000637540 FAM104AQ969W3 186 aa3.47□□□□□ -1.85
SCN8A-213ENST00000637540 TOMM6Q96B49 74 aa3.47□□□□□ -1.85
SCN8A-213ENST00000637540 IFI27L1Q96BM0 104 aa3.47□□□□□ -1.85
SCN8A-213ENST00000637540 WFDC10AQ9H1F0 79 aa3.47□□□□□ -1.85
SCN8A-213ENST00000637540 Q9UF83 564 aa3.47□□□□□ -1.85
SCN8A-213ENST00000637540 HHLA3Q9XRX5 114 aa3.47□□□□□ -1.85
SCN8A-213ENST00000637540 TIMM8BQ9Y5J9 83 aaPredicted RBP3.47□□□□□ -1.85
SCN8A-213ENST00000637540 A0A087WWL8 130 aa3.46□□□□□ -1.86
SCN8A-213ENST00000637540 hDV102S1A0JD36 115 aa3.46□□□□□ -1.86
SCN8A-213ENST00000637540 M0R2P5 195 aa3.46□□□□□ -1.86
SCN8A-213ENST00000637540 EREGO14944 169 aa3.46□□□□□ -1.86
SCN8A-213ENST00000637540 PPP1R17O96001 155 aa3.46□□□□□ -1.86
SCN8A-213ENST00000637540 TSHBP01222 138 aa3.46□□□□□ -1.86
SCN8A-213ENST00000637540 FGF6P10767 208 aa3.46□□□□□ -1.86
SCN8A-213ENST00000637540 ZNF876PQ49A33 203 aa3.46□□□□□ -1.86
SCN8A-213ENST00000637540 ANKRD39Q53RE8 183 aa3.46□□□□□ -1.86
SCN8A-213ENST00000637540 CFAP126Q5VTH2 177 aa3.46□□□□□ -1.86
SCN8A-213ENST00000637540 ZNF705AQ6ZN79 300 aaPredicted RBP3.46□□□□□ -1.86
SCN8A-213ENST00000637540 MRPL52Q86TS9 123 aaKnown RBP3.46□□□□□ -1.86
SCN8A-213ENST00000637540 SYT8Q8NBV8 401 aa3.46□□□□□ -1.86
SCN8A-213ENST00000637540 C2orf88Q9BSF0 95 aa3.46□□□□□ -1.86
SCN8A-213ENST00000637540 SPXQ9BT56 116 aa3.46□□□□□ -1.86
SCN8A-213ENST00000637540 SNHG12Q9BXW3 62 aa3.46□□□□□ -1.86
SCN8A-213ENST00000637540 CSTL1Q9H114 145 aa3.46□□□□□ -1.86
SCN8A-213ENST00000637540 ST20Q9HBF5 79 aa3.46□□□□□ -1.86
SCN8A-213ENST00000637540 XCL2Q9UBD3 114 aa3.46□□□□□ -1.86
SCN8A-213ENST00000637540 DKK2Q9UBU2 259 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms