RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 SRSF2Q01130 221 aaKnown RBP12.2□□□□□ -0.46
CLN5-218ENST00000637397 C11orf86A6NJI1 115 aa12.2□□□□□ -0.46
CLN5-218ENST00000637397 TOMM6Q96B49 74 aa12.2□□□□□ -0.46
CLN5-218ENST00000637397 H3BUA1 57 aa12.2□□□□□ -0.46
CLN5-218ENST00000637397 TEN1Q86WV5 123 aa12.2□□□□□ -0.46
CLN5-218ENST00000637397 MUSTN1Q8IVN3 82 aa12.2□□□□□ -0.46
CLN5-218ENST00000637397 IGLC6P0CF74 106 aa12.19□□□□□ -0.46
CLN5-218ENST00000637397 LINC01619G3V211 115 aa12.19□□□□□ -0.46
CLN5-218ENST00000637397 IGF2-ASQ6U949 168 aa12.19□□□□□ -0.46
CLN5-218ENST00000637397 ZNF48Q96MX3 618 aaPredicted RBP12.19□□□□□ -0.46
CLN5-218ENST00000637397 LAMTOR3Q9UHA4 124 aa12.19□□□□□ -0.46
CLN5-218ENST00000637397 PTPRSQ13332 1948 aa12.19□□□□□ -0.46
CLN5-218ENST00000637397 INAFM2P0DMQ5 153 aa12.19□□□□□ -0.46
CLN5-218ENST00000637397 CMC4P56277 68 aaPredicted RBP12.19□□□□□ -0.46
CLN5-218ENST00000637397 C9orf153Q5TBE3 101 aa12.19□□□□□ -0.46
CLN5-218ENST00000637397 C5orf56Q8N8D9 126 aa12.19□□□□□ -0.46
CLN5-218ENST00000637397 OVOL2Q9BRP0 275 aa12.19□□□□□ -0.46
CLN5-218ENST00000637397 IGHV4-59P01825 116 aa12.18□□□□□ -0.46
CLN5-218ENST00000637397 IGHV4-38-2P0DP08 117 aa12.18□□□□□ -0.46
CLN5-218ENST00000637397 FOXI1Q12951 378 aa12.18□□□□□ -0.46
CLN5-218ENST00000637397 ANKRD29Q8N6D5 301 aa12.18□□□□□ -0.46
CLN5-218ENST00000637397 PTH2Q96A98 100 aa12.18□□□□□ -0.46
CLN5-218ENST00000637397 CEP192Q8TEP8 1941 aa12.18□□□□□ -0.46
CLN5-218ENST00000637397 IGF2RP11717 2491 aa12.18□□□□□ -0.46
CLN5-218ENST00000637397 IGKV2D-26A0A0A0MRZ7 120 aa12.18□□□□□ -0.46
CLN5-218ENST00000637397 B5MCH6 92 aa12.18□□□□□ -0.46
CLN5-218ENST00000637397 LRP4O75096 1905 aa12.18□□□□□ -0.46
CLN5-218ENST00000637397 IGHV4-61A0A0C4DH41 118 aa12.17□□□□□ -0.46
CLN5-218ENST00000637397 GAGE7O76087 117 aa12.17□□□□□ -0.46
CLN5-218ENST00000637397 GAGE12FP0CL80 117 aa12.17□□□□□ -0.46
CLN5-218ENST00000637397 GAGE12GP0CL81 117 aa12.17□□□□□ -0.46
CLN5-218ENST00000637397 GAGE12IP0CL82 117 aa12.17□□□□□ -0.46
CLN5-218ENST00000637397 UNQ9165/PRO28630Q6UXU0 137 aa12.17□□□□□ -0.46
CLN5-218ENST00000637397 IGLV2-11P01706 119 aa12.17□□□□□ -0.46
CLN5-218ENST00000637397 Q8N976 141 aa12.16□□□□□ -0.46
CLN5-218ENST00000637397 Q9H8V8 135 aa12.16□□□□□ -0.46
CLN5-218ENST00000637397 GHRHP01286 108 aa12.16□□□□□ -0.46
CLN5-218ENST00000637397 CRYGBP07316 175 aa12.16□□□□□ -0.46
CLN5-218ENST00000637397 HOXD3P31249 432 aaPredicted RBP12.16□□□□□ -0.46
CLN5-218ENST00000637397 TMEM243Q9BU79 118 aa12.16□□□□□ -0.46
CLN5-218ENST00000637397 HERVK_113P63121 156 aa12.16□□□□□ -0.46
CLN5-218ENST00000637397 GAGE6Q13070 117 aa12.16□□□□□ -0.46
CLN5-218ENST00000637397 Q8N1Y9 231 aa12.15□□□□□ -0.46
CLN5-218ENST00000637397 DEFB112Q30KQ8 113 aa12.15□□□□□ -0.46
CLN5-218ENST00000637397 ARHGAP32A7KAX9 2087 aa12.15□□□□□ -0.46
CLN5-218ENST00000637397 LINC01548A6NM66 108 aa12.15□□□□□ -0.46
CLN5-218ENST00000637397 SS18Q15532 418 aa12.15□□□□□ -0.46
CLN5-218ENST00000637397 MYO18BQ8IUG5 2567 aa12.15□□□□□ -0.46
CLN5-218ENST00000637397 SONP18583 2426 aaKnown RBP12.15□□□□□ -0.46
CLN5-218ENST00000637397 TRBV12-3P01733 135 aa12.15□□□□□ -0.46
CLN5-218ENST00000637397 DEFB136Q30KP8 78 aa12.15□□□□□ -0.46
CLN5-218ENST00000637397 ELANEP08246 267 aa12.14□□□□□ -0.47
CLN5-218ENST00000637397 SPAG8Q99932 426 aaPredicted RBP12.14□□□□□ -0.47
CLN5-218ENST00000637397 Q8NA96 180 aa12.14□□□□□ -0.47
CLN5-218ENST00000637397 DNAJC30Q96LL9 226 aa12.14□□□□□ -0.47
CLN5-218ENST00000637397 C2orf91Q6ZV80 131 aa12.14□□□□□ -0.47
CLN5-218ENST00000637397 CCDC140Q96MF4 163 aa12.14□□□□□ -0.47
CLN5-218ENST00000637397 CPAMD8Q8IZJ3 1885 aa12.14□□□□□ -0.47
CLN5-218ENST00000637397 NXPH4O95158 308 aa12.13□□□□□ -0.47
CLN5-218ENST00000637397 U3KQE9 123 aa12.13□□□□□ -0.47
CLN5-218ENST00000637397 ADORA2A-AS1P86434 159 aa12.13□□□□□ -0.47
CLN5-218ENST00000637397 LINC01620Q4KN68 170 aa12.13□□□□□ -0.47
CLN5-218ENST00000637397 TIMM17AQ99595 171 aa12.13□□□□□ -0.47
CLN5-218ENST00000637397 OPRPNQ99935 248 aaPredicted RBP12.13□□□□□ -0.47
CLN5-218ENST00000637397 SOCS3O14543 225 aa12.13□□□□□ -0.47
CLN5-218ENST00000637397 SP5Q6BEB4 398 aaPredicted RBP12.12□□□□□ -0.47
CLN5-218ENST00000637397 SPANXA1Q9NS26 97 aa12.12□□□□□ -0.47
CLN5-218ENST00000637397 SIRPDQ9H106 197 aa12.12□□□□□ -0.47
CLN5-218ENST00000637397 DAND5Q8N907 189 aa12.12□□□□□ -0.47
CLN5-218ENST00000637397 SS18L2Q9UHA2 77 aa12.11□□□□□ -0.47
CLN5-218ENST00000637397 PRSS47A8MTI9 375 aa12.11□□□□□ -0.47
CLN5-218ENST00000637397 MAPKAPK5-AS1Q8N8E1 139 aa12.11□□□□□ -0.47
CLN5-218ENST00000637397 TM2D2Q9BX73 214 aa12.11□□□□□ -0.47
CLN5-218ENST00000637397 RS1O15537 224 aa12.11□□□□□ -0.47
CLN5-218ENST00000637397 MDFICQ9P1T7 246 aa12.11□□□□□ -0.47
CLN5-218ENST00000637397 IGF1P05019 195 aa12.1□□□□□ -0.47
CLN5-218ENST00000637397 URB1-AS1Q96HZ7 61 aa12.1□□□□□ -0.47
CLN5-218ENST00000637397 APRG1Q8IVJ8 170 aa12.1□□□□□ -0.47
CLN5-218ENST00000637397 CCDC168Q8NDH2 2452 aa12.1□□□□□ -0.47
CLN5-218ENST00000637397 ODF3BA8MYP8 253 aa12.09□□□□□ -0.47
CLN5-218ENST00000637397 MED14OSP0DP75 135 aa12.09□□□□□ -0.47
CLN5-218ENST00000637397 NDUFA11Q86Y39 141 aa12.09□□□□□ -0.47
CLN5-218ENST00000637397 RNF185Q96GF1 192 aa12.09□□□□□ -0.47
CLN5-218ENST00000637397 ICOSQ9Y6W8 199 aa12.09□□□□□ -0.47
CLN5-218ENST00000637397 PRRC2CQ9Y520 2896 aaKnown RBP12.09□□□□□ -0.47
CLN5-218ENST00000637397 IGHV4-30-2A0A087WSY4 118 aa12.09□□□□□ -0.47
CLN5-218ENST00000637397 TRAV13-2A0A0B4J235 113 aa12.09□□□□□ -0.47
CLN5-218ENST00000637397 IGHG4P01861 327 aa12.09□□□□□ -0.47
CLN5-218ENST00000637397 CRYBA4P53673 196 aa12.09□□□□□ -0.47
CLN5-218ENST00000637397 U3KQK5 164 aa12.09□□□□□ -0.47
CLN5-218ENST00000637397 BAALC-AS2P0C853 105 aa12.08□□□□□ -0.47
CLN5-218ENST00000637397 SMAD5-AS1Q9Y6J3 95 aa12.08□□□□□ -0.47
CLN5-218ENST00000637397 NBL1P41271 181 aa12.08□□□□□ -0.48
CLN5-218ENST00000637397 SLURP1P55000 103 aa12.08□□□□□ -0.48
CLN5-218ENST00000637397 NCOR2Q9Y618 2525 aa12.08□□□□□ -0.48
CLN5-218ENST00000637397 TINCRA0A1B0GVN0 87 aa12.07□□□□□ -0.48
CLN5-218ENST00000637397 TCL1BO95988 128 aa12.07□□□□□ -0.48
CLN5-218ENST00000637397 NOP10Q9NPE3 64 aaKnown RBP12.07□□□□□ -0.48
CLN5-218ENST00000637397 VPREB3Q9UKI3 123 aa12.07□□□□□ -0.48
CLN5-218ENST00000637397 DSCAMO60469 2012 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms