RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 NACAE9PAV3 2078 aa5.25□□□□□ -1.57
CIITA-214ENST00000636238 IGHV1OR15-1A0A075B7D0 117 aa5.25□□□□□ -1.57
CIITA-214ENST00000636238 A0A1B0GUT8 65 aa5.25□□□□□ -1.57
CIITA-214ENST00000636238 A0A1B0GXF2 115 aa5.25□□□□□ -1.57
CIITA-214ENST00000636238 SMIM9A6NGZ8 99 aa5.25□□□□□ -1.57
CIITA-214ENST00000636238 M0R2N4 97 aa5.25□□□□□ -1.57
CIITA-214ENST00000636238 HTN1P15515 57 aa5.25□□□□□ -1.57
CIITA-214ENST00000636238 RAB5BP61020 215 aa5.25□□□□□ -1.57
CIITA-214ENST00000636238 RIGQ13278 110 aa5.25□□□□□ -1.57
CIITA-214ENST00000636238 KIAA1644Q3SXP7 199 aa5.25□□□□□ -1.57
CIITA-214ENST00000636238 FAM159AQ6UWV7 190 aa5.25□□□□□ -1.57
CIITA-214ENST00000636238 CSNK1G2-AS1Q8NCQ2 148 aa5.25□□□□□ -1.57
CIITA-214ENST00000636238 BORCS7Q96B45 105 aa5.25□□□□□ -1.57
CIITA-214ENST00000636238 MSRB1Q9NZV6 116 aa5.25□□□□□ -1.57
CIITA-214ENST00000636238 IGHV3OR16-12A0A075B7B8 117 aa5.24□□□□□ -1.57
CIITA-214ENST00000636238 PHOX2AO14813 284 aa5.24□□□□□ -1.57
CIITA-214ENST00000636238 TRGC1P0CF51 173 aa5.24□□□□□ -1.57
CIITA-214ENST00000636238 SPART-AS1P0CW21 52 aa5.24□□□□□ -1.57
CIITA-214ENST00000636238 BTF3P20290 206 aaKnown RBP5.24□□□□□ -1.57
CIITA-214ENST00000636238 NTF3P20783 257 aa5.24□□□□□ -1.57
CIITA-214ENST00000636238 S100A4P26447 101 aaKnown RBP5.24□□□□□ -1.57
CIITA-214ENST00000636238 CTRLP40313 264 aa5.24□□□□□ -1.57
CIITA-214ENST00000636238 ASIPP42127 132 aa5.24□□□□□ -1.57
CIITA-214ENST00000636238 HBBP68871 147 aa5.24□□□□□ -1.57
CIITA-214ENST00000636238 TWIST1Q15672 202 aa5.24□□□□□ -1.57
CIITA-214ENST00000636238 WDR73Q6P4I2 378 aa5.24□□□□□ -1.57
CIITA-214ENST00000636238 ATP5L2Q7Z4Y8 100 aa5.24□□□□□ -1.57
CIITA-214ENST00000636238 OR10AG1Q8NH19 301 aa5.24□□□□□ -1.57
CIITA-214ENST00000636238 KCNS1Q96KK3 526 aa5.24□□□□□ -1.57
CIITA-214ENST00000636238 CLUHP3Q96NS8 147 aa5.24□□□□□ -1.57
CIITA-214ENST00000636238 LINC01587Q99440 93 aa5.24□□□□□ -1.57
CIITA-214ENST00000636238 GNB1LQ9BYB4 327 aa5.24□□□□□ -1.57
CIITA-214ENST00000636238 MDFICQ9P1T7 246 aa5.24□□□□□ -1.57
CIITA-214ENST00000636238 IGHV3-16A0A0C4DH30 117 aa5.23□□□□□ -1.57
CIITA-214ENST00000636238 CBY3A6NI87 242 aa5.23□□□□□ -1.57
CIITA-214ENST00000636238 HIST1H2BKO60814 126 aa5.23□□□□□ -1.57
CIITA-214ENST00000636238 INSP01308 110 aa5.23□□□□□ -1.57
CIITA-214ENST00000636238 APCSP02743 223 aa5.23□□□□□ -1.57
CIITA-214ENST00000636238 HIST1H2BJP06899 126 aa5.23□□□□□ -1.57
CIITA-214ENST00000636238 RNASE3P12724 160 aaKnown RBP5.23□□□□□ -1.57
CIITA-214ENST00000636238 HIST1H2BOP23527 126 aa5.23□□□□□ -1.57
CIITA-214ENST00000636238 HIST1H2BBP33778 126 aa5.23□□□□□ -1.57
CIITA-214ENST00000636238 NDUFA6P56556 154 aa5.23□□□□□ -1.57
CIITA-214ENST00000636238 HIST1H2BDP58876 126 aa5.23□□□□□ -1.57
CIITA-214ENST00000636238 HIST1H2BCP62807 126 aa5.23□□□□□ -1.57
CIITA-214ENST00000636238 SLAQ13239 276 aa5.23□□□□□ -1.57
CIITA-214ENST00000636238 HIST2H2BEQ16778 126 aa5.23□□□□□ -1.57
CIITA-214ENST00000636238 COX19Q49B96 90 aa5.23□□□□□ -1.57
CIITA-214ENST00000636238 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.23□□□□□ -1.57
CIITA-214ENST00000636238 C1orf158Q8N1D5 194 aa5.23□□□□□ -1.57
CIITA-214ENST00000636238 C15orf53Q8NAA6 179 aa5.23□□□□□ -1.57
CIITA-214ENST00000636238 HIST1H2BHQ93079 126 aa5.23□□□□□ -1.57
CIITA-214ENST00000636238 HIST1H2BNQ99877 126 aa5.23□□□□□ -1.57
CIITA-214ENST00000636238 HIST1H2BMQ99879 126 aa5.23□□□□□ -1.57
CIITA-214ENST00000636238 SCRT2Q9NQ03 307 aa5.23□□□□□ -1.57
CIITA-214ENST00000636238 F2Z2F3 143 aa5.22□□□□□ -1.57
CIITA-214ENST00000636238 M0R381 172 aa5.22□□□□□ -1.57
CIITA-214ENST00000636238 SNAI2O43623 268 aa5.22□□□□□ -1.57
CIITA-214ENST00000636238 HLA-DQA1P01909 254 aa5.22□□□□□ -1.57
CIITA-214ENST00000636238 AZU1P20160 251 aa5.22□□□□□ -1.57
CIITA-214ENST00000636238 TDRG1Q3Y452 100 aa5.22□□□□□ -1.57
CIITA-214ENST00000636238 DNLZQ5SXM8 178 aa5.22□□□□□ -1.57
CIITA-214ENST00000636238 SPANXN1Q5VSR9 72 aa5.22□□□□□ -1.57
CIITA-214ENST00000636238 RASL11AQ6T310 242 aa5.22□□□□□ -1.57
CIITA-214ENST00000636238 TMEM208Q9BTX3 173 aa5.22□□□□□ -1.57
CIITA-214ENST00000636238 CELA1Q9UNI1 258 aa5.22□□□□□ -1.57
CIITA-214ENST00000636238 PHLDA3Q9Y5J5 127 aa5.22□□□□□ -1.57
CIITA-214ENST00000636238 TRGV11A0A075B6L2 103 aa5.21□□□□□ -1.58
CIITA-214ENST00000636238 A0A1B0GW15 77 aa5.21□□□□□ -1.58
CIITA-214ENST00000636238 MT-ND6P03923 174 aa5.21□□□□□ -1.58
CIITA-214ENST00000636238 S100A8P05109 93 aa5.21□□□□□ -1.58
CIITA-214ENST00000636238 OR5AL1P0C617 328 aa5.21□□□□□ -1.58
CIITA-214ENST00000636238 SNRPEP62304 92 aaKnown RBP5.21□□□□□ -1.58
CIITA-214ENST00000636238 CACNG7P62955 275 aa5.21□□□□□ -1.58
CIITA-214ENST00000636238 ZNF705AQ6ZN79 300 aaPredicted RBP5.21□□□□□ -1.58
CIITA-214ENST00000636238 C6orf223Q8N319 242 aa5.21□□□□□ -1.58
CIITA-214ENST00000636238 GATD1Q8NB37 220 aa5.21□□□□□ -1.58
CIITA-214ENST00000636238 C9orf85Q96MD7 179 aa5.21□□□□□ -1.58
CIITA-214ENST00000636238 C20orf144Q9BQM9 153 aa5.21□□□□□ -1.58
CIITA-214ENST00000636238 JPT2Q9H910 190 aa5.21□□□□□ -1.58
CIITA-214ENST00000636238 FAT1Q14517 4588 aa5.2□□□□□ -1.58
CIITA-214ENST00000636238 IGLV2-18A0A075B6J9 118 aa5.2□□□□□ -1.58
CIITA-214ENST00000636238 NBDYA0A0U1RRE5 68 aa5.2□□□□□ -1.58
CIITA-214ENST00000636238 SMKR1H3BMG3 65 aa5.2□□□□□ -1.58
CIITA-214ENST00000636238 S100A6P06703 90 aa5.2□□□□□ -1.58
CIITA-214ENST00000636238 EVI2AP22794 236 aa5.2□□□□□ -1.58
CIITA-214ENST00000636238 SRIP30626 198 aa5.2□□□□□ -1.58
CIITA-214ENST00000636238 TNP2Q05952 138 aa5.2□□□□□ -1.58
CIITA-214ENST00000636238 IQCJQ1A5X6 159 aa5.2□□□□□ -1.58
CIITA-214ENST00000636238 MRPL51Q4U2R6 128 aaKnown RBP5.2□□□□□ -1.58
CIITA-214ENST00000636238 C4orf48Q5BLP8 95 aa5.2□□□□□ -1.58
CIITA-214ENST00000636238 FAM104BQ5XKR9 115 aa5.2□□□□□ -1.58
CIITA-214ENST00000636238 ZNF493Q6ZR52 646 aa5.2□□□□□ -1.58
CIITA-214ENST00000636238 AMN1Q8IY45 258 aa5.2□□□□□ -1.58
CIITA-214ENST00000636238 CNFNQ9BYD5 112 aa5.2□□□□□ -1.58
CIITA-214ENST00000636238 GSN-AS1Q9NRJ2 163 aa5.2□□□□□ -1.58
CIITA-214ENST00000636238 GOLT1BQ9Y3E0 138 aa5.2□□□□□ -1.58
CIITA-214ENST00000636238 LOC105371267A0A1B0GV96 52 aa5.19□□□□□ -1.58
CIITA-214ENST00000636238 EPM2AB3EWF7 344 aa5.19□□□□□ -1.58
CIITA-214ENST00000636238 GAS8-AS1O95177 125 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms