RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 SLC25A29Q8N8R3 303 aa10.75□□□□□ -0.69
CLN6-211ENST00000635754 PRADC1Q9BSG0 188 aa10.75□□□□□ -0.69
CLN6-211ENST00000635754 SAMD10Q9BYL1 202 aa10.75□□□□□ -0.69
CLN6-211ENST00000635754 NAT8Q9UHE5 227 aa10.75□□□□□ -0.69
CLN6-211ENST00000635754 A0A087WWL8 130 aa10.74□□□□□ -0.69
CLN6-211ENST00000635754 F2Z2F3 143 aa10.74□□□□□ -0.69
CLN6-211ENST00000635754 K7EQD1 137 aa10.74□□□□□ -0.69
CLN6-211ENST00000635754 SOHLH1Q5JUK2 328 aa10.74□□□□□ -0.69
CLN6-211ENST00000635754 SSTP61278 116 aa10.73□□□□□ -0.69
CLN6-211ENST00000635754 CACNG7P62955 275 aa10.73□□□□□ -0.69
CLN6-211ENST00000635754 UFSP1Q6NVU6 142 aa10.73□□□□□ -0.69
CLN6-211ENST00000635754 NEGR1Q7Z3B1 354 aa10.73□□□□□ -0.69
CLN6-211ENST00000635754 LINC00528Q8N1L1 170 aa10.73□□□□□ -0.69
CLN6-211ENST00000635754 LINC00588Q9Y4M8 146 aa10.73□□□□□ -0.69
CLN6-211ENST00000635754 CRYGDP07320 174 aa10.72□□□□□ -0.69
CLN6-211ENST00000635754 ADIRFQ15847 76 aa10.72□□□□□ -0.69
CLN6-211ENST00000635754 ESRGQ1W209 222 aa10.72□□□□□ -0.69
CLN6-211ENST00000635754 LCE2AQ5TA79 106 aaPredicted RBP10.72□□□□□ -0.69
CLN6-211ENST00000635754 LYZL1Q6UWQ5 148 aa10.72□□□□□ -0.69
CLN6-211ENST00000635754 C15orf54Q8N8G6 183 aa10.72□□□□□ -0.69
CLN6-211ENST00000635754 AP1S3Q96PC3 154 aa10.72□□□□□ -0.69
CLN6-211ENST00000635754 OSTCQ9NRP0 149 aa10.72□□□□□ -0.69
CLN6-211ENST00000635754 LOC100131303A0A0U1RQF7 123 aa10.71□□□□□ -0.69
CLN6-211ENST00000635754 A8MWL6 223 aa10.71□□□□□ -0.69
CLN6-211ENST00000635754 CTRLP40313 264 aa10.71□□□□□ -0.69
CLN6-211ENST00000635754 RPL23P62829 140 aaKnown RBP10.71□□□□□ -0.69
CLN6-211ENST00000635754 CT83Q5H943 113 aa10.71□□□□□ -0.69
CLN6-211ENST00000635754 SH2D6Q7Z4S9 175 aa10.71□□□□□ -0.69
CLN6-211ENST00000635754 ISOC2Q96AB3 205 aa10.71□□□□□ -0.69
CLN6-211ENST00000635754 SMIM17P0DL12 118 aa10.7□□□□□ -0.7
CLN6-211ENST00000635754 Q6ZSN1 163 aa10.7□□□□□ -0.7
CLN6-211ENST00000635754 MRPS16Q9Y3D3 137 aaKnown RBP10.7□□□□□ -0.7
CLN6-211ENST00000635754 SACSQ9NZJ4 4579 aa10.7□□□□□ -0.7
CLN6-211ENST00000635754 ZNF56Q15929 161 aa10.69□□□□□ -0.7
CLN6-211ENST00000635754 C14orf178Q8N769 122 aaPredicted RBP10.69□□□□□ -0.7
CLN6-211ENST00000635754 DNAH1Q9P2D7 4330 aa10.69□□□□□ -0.7
CLN6-211ENST00000635754 TRGC1P0CF51 173 aa10.68□□□□□ -0.7
CLN6-211ENST00000635754 NTF3P20783 257 aa10.68□□□□□ -0.7
CLN6-211ENST00000635754 WDR73Q6P4I2 378 aa10.68□□□□□ -0.7
CLN6-211ENST00000635754 LYPD5Q6UWN5 251 aa10.68□□□□□ -0.7
CLN6-211ENST00000635754 ZNRF2Q8NHG8 242 aa10.68□□□□□ -0.7
CLN6-211ENST00000635754 GTSF1Q8WW33 167 aa10.68□□□□□ -0.7
CLN6-211ENST00000635754 UPK3BQ9BT76 320 aa10.68□□□□□ -0.7
CLN6-211ENST00000635754 MSRB1Q9NZV6 116 aa10.68□□□□□ -0.7
CLN6-211ENST00000635754 IGLV2-18A0A075B6J9 118 aa10.67□□□□□ -0.7
CLN6-211ENST00000635754 RAB4BP61018 213 aa10.67□□□□□ -0.7
CLN6-211ENST00000635754 TSKUQ8WUA8 353 aa10.67□□□□□ -0.7
CLN6-211ENST00000635754 CNFNQ9BYD5 112 aa10.67□□□□□ -0.7
CLN6-211ENST00000635754 RYR3Q15413 4870 aa10.67□□□□□ -0.7
CLN6-211ENST00000635754 F5H697 171 aa10.67□□□□□ -0.7
CLN6-211ENST00000635754 TWIST1Q15672 202 aa10.67□□□□□ -0.7
CLN6-211ENST00000635754 OR10G8Q8NGN5 311 aa10.67□□□□□ -0.7
CLN6-211ENST00000635754 BORCS7Q96B45 105 aa10.67□□□□□ -0.7
CLN6-211ENST00000635754 GFRA4Q9GZZ7 299 aa10.67□□□□□ -0.7
CLN6-211ENST00000635754 V9GYV3 84 aa10.67□□□□□ -0.7
CLN6-211ENST00000635754 RYR2Q92736 4967 aa10.66□□□□□ -0.7
CLN6-211ENST00000635754 FAM231BA6NCW3 169 aa10.66□□□□□ -0.7
CLN6-211ENST00000635754 GAGE12JA6NER3 117 aa10.66□□□□□ -0.7
CLN6-211ENST00000635754 M0R2N4 97 aa10.66□□□□□ -0.7
CLN6-211ENST00000635754 GAGE1Q13065 139 aa10.66□□□□□ -0.7
CLN6-211ENST00000635754 GAGE4Q13068 117 aa10.66□□□□□ -0.7
CLN6-211ENST00000635754 GAGE5Q13069 117 aa10.66□□□□□ -0.7
CLN6-211ENST00000635754 GAGE13Q4V321 117 aa10.66□□□□□ -0.7
CLN6-211ENST00000635754 UQCC3Q6UW78 93 aa10.66□□□□□ -0.7
CLN6-211ENST00000635754 ATP6V0E2Q8NHE4 81 aa10.66□□□□□ -0.7
CLN6-211ENST00000635754 PGLYRP4Q96LB8 373 aa10.66□□□□□ -0.7
CLN6-211ENST00000635754 Q9H8V8 135 aa10.66□□□□□ -0.7
CLN6-211ENST00000635754 KIF25-AS1Q9Y6Z4 181 aa10.66□□□□□ -0.7
CLN6-211ENST00000635754 TRBV10-1A0A0K0K1A3 114 aa10.65□□□□□ -0.7
CLN6-211ENST00000635754 HIGD1CA8MV81 97 aa10.65□□□□□ -0.7
CLN6-211ENST00000635754 MGPP08493 103 aa10.65□□□□□ -0.7
CLN6-211ENST00000635754 FOXA3P55318 350 aaPredicted RBP10.65□□□□□ -0.7
CLN6-211ENST00000635754 VPS13DQ5THJ4 4388 aa10.64□□□□□ -0.71
CLN6-211ENST00000635754 LINC00694P0DN24 101 aa10.64□□□□□ -0.71
CLN6-211ENST00000635754 EVI2AP22794 236 aa10.64□□□□□ -0.71
CLN6-211ENST00000635754 TIRAPP58753 221 aa10.64□□□□□ -0.71
CLN6-211ENST00000635754 PNRC1Q12796 327 aaPredicted RBP10.64□□□□□ -0.71
CLN6-211ENST00000635754 DPH3P1Q9H4G8 78 aa10.64□□□□□ -0.71
CLN6-211ENST00000635754 Q9UF83 564 aa10.64□□□□□ -0.71
CLN6-211ENST00000635754 SIVA1O15304 175 aa10.63□□□□□ -0.71
CLN6-211ENST00000635754 LINC00315P59091 139 aa10.63□□□□□ -0.71
CLN6-211ENST00000635754 RPL36AP83881 106 aaKnown RBP10.63□□□□□ -0.71
CLN6-211ENST00000635754 SMIM15Q7Z3B0 74 aa10.63□□□□□ -0.71
CLN6-211ENST00000635754 COMMD7Q86VX2 200 aa10.63□□□□□ -0.71
CLN6-211ENST00000635754 RPL36ALQ969Q0 106 aaKnown RBP10.63□□□□□ -0.71
CLN6-211ENST00000635754 NBDYA0A0U1RRE5 68 aa10.62□□□□□ -0.71
CLN6-211ENST00000635754 A0A1B0GUT8 65 aa10.62□□□□□ -0.71
CLN6-211ENST00000635754 H7C1H1 209 aa10.62□□□□□ -0.71
CLN6-211ENST00000635754 TTC32Q5I0X7 151 aa10.62□□□□□ -0.71
CLN6-211ENST00000635754 Q6ZR54 194 aa10.62□□□□□ -0.71
CLN6-211ENST00000635754 GTSF1LQ9H1H1 148 aa10.62□□□□□ -0.71
CLN6-211ENST00000635754 NAT8BQ9UHF3 227 aa10.62□□□□□ -0.71
CLN6-211ENST00000635754 TRBV7-3A0A075B6L6 115 aa10.61□□□□□ -0.71
CLN6-211ENST00000635754 KMT2AQ03164 3969 aa10.6□□□□□ -0.71
CLN6-211ENST00000635754 SUMO4Q6EEV6 95 aa10.6□□□□□ -0.71
CLN6-211ENST00000635754 NEXN-AS1Q8NBZ9 246 aa10.6□□□□□ -0.71
CLN6-211ENST00000635754 NUP35Q8NFH5 326 aa10.6□□□□□ -0.71
CLN6-211ENST00000635754 HYDINQ4G0P3 5121 aa10.6□□□□□ -0.71
CLN6-211ENST00000635754 TRAV8-6A0A0B4J262 113 aa10.59□□□□□ -0.71
CLN6-211ENST00000635754 SMIM27A0A1W2PRY6 76 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms