RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 GAGE5Q13069 117 aa10.71□□□□□ -0.69
LINC00339-207ENST00000634712 GAGE13Q4V321 117 aa10.71□□□□□ -0.69
LINC00339-207ENST00000634712 OR10J3Q5JRS4 329 aa10.71□□□□□ -0.69
LINC00339-207ENST00000634712 SPANXN1Q5VSR9 72 aa10.71□□□□□ -0.69
LINC00339-207ENST00000634712 GTSF1LQ9H1H1 148 aa10.71□□□□□ -0.69
LINC00339-207ENST00000634712 BOLA1Q9Y3E2 137 aa10.71□□□□□ -0.69
LINC00339-207ENST00000634712 LINC00315P59091 139 aa10.7□□□□□ -0.7
LINC00339-207ENST00000634712 RPS20P60866 119 aaKnown RBP10.7□□□□□ -0.7
LINC00339-207ENST00000634712 UFSP1Q6NVU6 142 aa10.7□□□□□ -0.7
LINC00339-207ENST00000634712 XKRY2A2RUG3 117 aa10.69□□□□□ -0.7
LINC00339-207ENST00000634712 RBFOX3A6NFN3 312 aa10.69□□□□□ -0.7
LINC00339-207ENST00000634712 IGLV2-8P01709 118 aa10.69□□□□□ -0.7
LINC00339-207ENST00000634712 CRYGDP07320 174 aa10.69□□□□□ -0.7
LINC00339-207ENST00000634712 OR5AL1P0C617 328 aa10.69□□□□□ -0.7
LINC00339-207ENST00000634712 SSTP61278 116 aa10.69□□□□□ -0.7
LINC00339-207ENST00000634712 C14orf178Q8N769 122 aaPredicted RBP10.69□□□□□ -0.7
LINC00339-207ENST00000634712 OR2D3Q8NGH3 330 aa10.69□□□□□ -0.7
LINC00339-207ENST00000634712 OR10AG1Q8NH19 301 aa10.69□□□□□ -0.7
LINC00339-207ENST00000634712 IGHV3-38A0A0C4DH36 116 aa10.68□□□□□ -0.7
LINC00339-207ENST00000634712 MUC21A0A0G2JKD1 596 aa10.68□□□□□ -0.7
LINC00339-207ENST00000634712 MUC21A0A140T8X8 626 aa10.68□□□□□ -0.7
LINC00339-207ENST00000634712 SNAI2O43623 268 aa10.68□□□□□ -0.7
LINC00339-207ENST00000634712 P01737 135 aa10.68□□□□□ -0.7
LINC00339-207ENST00000634712 DNAH10OSP0CZ25 163 aa10.68□□□□□ -0.7
LINC00339-207ENST00000634712 LELP1Q5T871 98 aa10.68□□□□□ -0.7
LINC00339-207ENST00000634712 NFE4Q86UQ8 179 aa10.68□□□□□ -0.7
LINC00339-207ENST00000634712 C10orf126Q8N4M7 172 aa10.68□□□□□ -0.7
LINC00339-207ENST00000634712 TPPP3Q9BW30 176 aa10.68□□□□□ -0.7
LINC00339-207ENST00000634712 SSBP4Q9BWG4 385 aaPredicted RBP10.68□□□□□ -0.7
LINC00339-207ENST00000634712 SMIM17P0DL12 118 aa10.67□□□□□ -0.7
LINC00339-207ENST00000634712 C19orf71A6NCJ1 209 aa10.66□□□□□ -0.7
LINC00339-207ENST00000634712 ZNF56Q15929 161 aa10.66□□□□□ -0.7
LINC00339-207ENST00000634712 FER1L6-AS1Q8NA97 138 aa10.66□□□□□ -0.7
LINC00339-207ENST00000634712 LYPD6BQ8NI32 183 aa10.66□□□□□ -0.7
LINC00339-207ENST00000634712 EIF5A2Q9GZV4 153 aaKnown RBP10.66□□□□□ -0.7
LINC00339-207ENST00000634712 MSRB1Q9NZV6 116 aa10.66□□□□□ -0.7
LINC00339-207ENST00000634712 PKD1P98161 4303 aa10.66□□□□□ -0.7
LINC00339-207ENST00000634712 TRBV20OR9-2A0A075B6H5 130 aa10.65□□□□□ -0.7
LINC00339-207ENST00000634712 F5H697 171 aa10.65□□□□□ -0.7
LINC00339-207ENST00000634712 TMEM250H0YL14 139 aa10.65□□□□□ -0.7
LINC00339-207ENST00000634712 GZMBP10144 247 aa10.65□□□□□ -0.7
LINC00339-207ENST00000634712 CEBPGP53567 150 aa10.65□□□□□ -0.7
LINC00339-207ENST00000634712 RAB4BP61018 213 aa10.65□□□□□ -0.7
LINC00339-207ENST00000634712 RPL36AP83881 106 aaKnown RBP10.65□□□□□ -0.7
LINC00339-207ENST00000634712 RPL36ALQ969Q0 106 aaKnown RBP10.65□□□□□ -0.7
LINC00339-207ENST00000634712 TNFRSF18Q9Y5U5 241 aa10.65□□□□□ -0.7
LINC00339-207ENST00000634712 A0A087WWC5 75 aa10.65□□□□□ -0.71
LINC00339-207ENST00000634712 TRBV10-1A0A0K0K1A3 114 aa10.65□□□□□ -0.71
LINC00339-207ENST00000634712 LINC01556Q5JQF7 62 aa10.65□□□□□ -0.71
LINC00339-207ENST00000634712 Q9UF83 564 aa10.65□□□□□ -0.71
LINC00339-207ENST00000634712 F2Z2F3 143 aa10.64□□□□□ -0.71
LINC00339-207ENST00000634712 EREGO14944 169 aa10.64□□□□□ -0.71
LINC00339-207ENST00000634712 IGHV3-30P01768 117 aa10.64□□□□□ -0.71
LINC00339-207ENST00000634712 IGHV3-33P01772 117 aa10.64□□□□□ -0.71
LINC00339-207ENST00000634712 LINC00694P0DN24 101 aa10.64□□□□□ -0.71
LINC00339-207ENST00000634712 IGHV3-30-3P0DP02 117 aa10.64□□□□□ -0.71
LINC00339-207ENST00000634712 IGHV3-30-5P0DP03 117 aa10.64□□□□□ -0.71
LINC00339-207ENST00000634712 CACNG7P62955 275 aa10.64□□□□□ -0.71
LINC00339-207ENST00000634712 TOR2AQ5JU69 321 aa10.64□□□□□ -0.71
LINC00339-207ENST00000634712 NUDT10Q8NFP7 164 aa10.64□□□□□ -0.71
LINC00339-207ENST00000634712 OCC1Q8TAD7 63 aa10.64□□□□□ -0.71
LINC00339-207ENST00000634712 NUDT11Q96G61 164 aa10.64□□□□□ -0.71
LINC00339-207ENST00000634712 AP1S3Q96PC3 154 aa10.64□□□□□ -0.71
LINC00339-207ENST00000634712 TRBV7-3A0A075B6L6 115 aa10.63□□□□□ -0.71
LINC00339-207ENST00000634712 C16orf90A8MZG2 172 aa10.63□□□□□ -0.71
LINC00339-207ENST00000634712 IGLC6P0CF74 106 aa10.63□□□□□ -0.71
LINC00339-207ENST00000634712 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.63□□□□□ -0.71
LINC00339-207ENST00000634712 PKHD1P08F94 4074 aa10.62□□□□□ -0.71
LINC00339-207ENST00000634712 Q6ZRN7 208 aaPredicted RBP10.62□□□□□ -0.71
LINC00339-207ENST00000634712 SPATA12Q7Z6I5 190 aa10.62□□□□□ -0.71
LINC00339-207ENST00000634712 ERVFC1-1P60608 527 aa10.61□□□□□ -0.71
LINC00339-207ENST00000634712 LYZL1Q6UWQ5 148 aa10.61□□□□□ -0.71
LINC00339-207ENST00000634712 FAM210AQ96ND0 272 aa10.61□□□□□ -0.71
LINC00339-207ENST00000634712 RNASE7Q9H1E1 156 aaKnown RBP10.61□□□□□ -0.71
LINC00339-207ENST00000634712 RPP21Q9H633 154 aaKnown RBP10.61□□□□□ -0.71
LINC00339-207ENST00000634712 URGCP-MRPS24S4R325 110 aa10.61□□□□□ -0.71
LINC00339-207ENST00000634712 IBA57-AS1B1ANH7 110 aa10.6□□□□□ -0.71
LINC00339-207ENST00000634712 K7EN84 100 aa10.6□□□□□ -0.71
LINC00339-207ENST00000634712 PSCAO43653 123 aa10.6□□□□□ -0.71
LINC00339-207ENST00000634712 MGPP08493 103 aa10.6□□□□□ -0.71
LINC00339-207ENST00000634712 TRGC1P0CF51 173 aa10.59□□□□□ -0.71
LINC00339-207ENST00000634712 UBE2D3P61077 147 aa10.59□□□□□ -0.71
LINC00339-207ENST00000634712 UBE2D2P62837 147 aa10.59□□□□□ -0.71
LINC00339-207ENST00000634712 KCNIP4Q6PIL6 250 aa10.59□□□□□ -0.71
LINC00339-207ENST00000634712 OR10G8Q8NGN5 311 aa10.59□□□□□ -0.71
LINC00339-207ENST00000634712 Q9HAA7 133 aa10.59□□□□□ -0.71
LINC00339-207ENST00000634712 DNAH11Q96DT5 4516 aa10.58□□□□□ -0.72
LINC00339-207ENST00000634712 GATCO43716 136 aaKnown RBP10.58□□□□□ -0.72
LINC00339-207ENST00000634712 NDUFS6O75380 124 aaKnown RBP10.58□□□□□ -0.72
LINC00339-207ENST00000634712 NTF3P20783 257 aa10.58□□□□□ -0.72
LINC00339-207ENST00000634712 NEXN-AS1Q8NBZ9 246 aa10.58□□□□□ -0.72
LINC00339-207ENST00000634712 SMIM7Q9BQ49 75 aa10.58□□□□□ -0.72
LINC00339-207ENST00000634712 KIF25-AS1Q9Y6Z4 181 aa10.58□□□□□ -0.72
LINC00339-207ENST00000634712 ZNF727A8MUV8 499 aa10.57□□□□□ -0.72
LINC00339-207ENST00000634712 H7C1H1 209 aa10.57□□□□□ -0.72
LINC00339-207ENST00000634712 TWIST1Q15672 202 aa10.57□□□□□ -0.72
LINC00339-207ENST00000634712 WDR73Q6P4I2 378 aa10.57□□□□□ -0.72
LINC00339-207ENST00000634712 TEX261Q6UWH6 196 aa10.57□□□□□ -0.72
LINC00339-207ENST00000634712 DYNC1H1Q14204 4646 aaKnown RBP10.57□□□□□ -0.72
LINC00339-207ENST00000634712 A0A087WX48 190 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms